BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026691
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   182   3e-44
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   182   3e-44
ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi...   164   5e-39
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   162   3e-38
ref|XP_002328803.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32

>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Vitis vinifera]
          Length = 881

 Score =  182 bits (461), Expect = 3e-44
 Identities = 87/112 (77%), Positives = 101/112 (90%)
 Frame = +3

Query: 6   EGRISPDKVTMNAAMCFFCKAGMVDVALDLYHSRSDFGLSLNSLAYNYLINTLCGDGSVD 185
           EG+I PDKVTMNA +CFFCKAGMVDVAL+LY+SR++FGLS NS+AYNYLINTLCGDGS D
Sbjct: 381 EGQILPDKVTMNAVLCFFCKAGMVDVALELYNSRAEFGLSPNSMAYNYLINTLCGDGSTD 440

Query: 186 EAYRVLLDSIKQGYFPGKRTTCILADALCREGKLDKMKELVLMSLELNIMQS 341
           EAY VL  S++QGYFPGK+T  ILADALC+EGKLDKMKELVL++L+ NIM S
Sbjct: 441 EAYHVLKHSLEQGYFPGKKTFSILADALCQEGKLDKMKELVLVALDRNIMPS 492


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  182 bits (461), Expect = 3e-44
 Identities = 87/112 (77%), Positives = 101/112 (90%)
 Frame = +3

Query: 6   EGRISPDKVTMNAAMCFFCKAGMVDVALDLYHSRSDFGLSLNSLAYNYLINTLCGDGSVD 185
           EG+I PDKVTMNA +CFFCKAGMVDVAL+LY+SR++FGLS NS+AYNYLINTLCGDGS D
Sbjct: 381 EGQILPDKVTMNAVLCFFCKAGMVDVALELYNSRAEFGLSPNSMAYNYLINTLCGDGSTD 440

Query: 186 EAYRVLLDSIKQGYFPGKRTTCILADALCREGKLDKMKELVLMSLELNIMQS 341
           EAY VL  S++QGYFPGK+T  ILADALC+EGKLDKMKELVL++L+ NIM S
Sbjct: 441 EAYHVLKHSLEQGYFPGKKTFSILADALCQEGKLDKMKELVLVALDRNIMPS 492


>ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Cucumis sativus]
          Length = 913

 Score =  164 bits (416), Expect = 5e-39
 Identities = 79/114 (69%), Positives = 95/114 (83%)
 Frame = +3

Query: 3   MEGRISPDKVTMNAAMCFFCKAGMVDVALDLYHSRSDFGLSLNSLAYNYLINTLCGDGSV 182
           M+  ISPDKVTM+AAMCF CKAGMV+VAL+LY+S  +FG+S N++AYNYLIN LC DGS 
Sbjct: 404 MDQHISPDKVTMDAAMCFLCKAGMVEVALELYNSNFEFGISPNTMAYNYLINALCRDGST 463

Query: 183 DEAYRVLLDSIKQGYFPGKRTTCILADALCREGKLDKMKELVLMSLELNIMQSE 344
           DEAYR+L  SI +GYFPGK+T  ILA ALCREGKLDKMKELV+ +LE N M ++
Sbjct: 464 DEAYRILKCSIYEGYFPGKKTFSILASALCREGKLDKMKELVIFALERNCMPND 517


>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71210-like, partial [Cucumis sativus]
          Length = 889

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/114 (68%), Positives = 94/114 (82%)
 Frame = +3

Query: 3   MEGRISPDKVTMNAAMCFFCKAGMVDVALDLYHSRSDFGLSLNSLAYNYLINTLCGDGSV 182
           M+  ISPDKVTM+AAMCF CKAGMV+VAL+LY+S  +FG+S N++AYNYLIN LC DGS 
Sbjct: 380 MDQHISPDKVTMDAAMCFLCKAGMVEVALELYNSNFEFGISPNTMAYNYLINALCRDGST 439

Query: 183 DEAYRVLLDSIKQGYFPGKRTTCILADALCREGKLDKMKELVLMSLELNIMQSE 344
           DEAYR+L  SI +GYFPGK+   ILA ALCREGKLDKMKELV+ +LE N M ++
Sbjct: 440 DEAYRILKCSIYEGYFPGKKXFSILASALCREGKLDKMKELVIFALERNCMPND 493


>ref|XP_002328803.1| predicted protein [Populus trichocarpa] gi|222839101|gb|EEE77452.1|
           predicted protein [Populus trichocarpa]
          Length = 881

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/113 (61%), Positives = 87/113 (76%)
 Frame = +3

Query: 6   EGRISPDKVTMNAAMCFFCKAGMVDVALDLYHSRSDFGLSLNSLAYNYLINTLCGDGSVD 185
           E +IS + VTMNAA+CFFCK GMV+VA  LY S+ +FG S N++AYNYLIN+LCG GS  
Sbjct: 391 ENQISANTVTMNAALCFFCKVGMVEVAHKLYKSKLEFGFSPNTMAYNYLINSLCGVGSSG 450

Query: 186 EAYRVLLDSIKQGYFPGKRTTCILADALCREGKLDKMKELVLMSLELNIMQSE 344
           EAY +L +SIKQGYFPG R   +LADALCR+GKLD + ELVL++L  N   S+
Sbjct: 451 EAYSLLKNSIKQGYFPGTRAFSVLADALCRQGKLDMVMELVLLALSKNFRLSD 503