BLASTX nr result
ID: Coptis25_contig00026683
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00026683 (918 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containi... 256 7e-66 emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera] 248 1e-63 ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|2... 239 9e-61 ref|XP_002525134.1| pentatricopeptide repeat-containing protein,... 231 2e-58 ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containi... 215 1e-53 >ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein At3g58590-like [Vitis vinifera] Length = 921 Score = 256 bits (653), Expect = 7e-66 Identities = 135/282 (47%), Positives = 180/282 (63%) Frame = +2 Query: 71 LLLQASTSKPPSLHTIQSIHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEM 250 LLL + K P+L + +HAL +T QPIFL NNLI Y L +S ++KVF EM Sbjct: 55 LLLLQACKKAPTLKETKPLHALTVTMASNSTQPIFLYNNLISLYVLQGELSTARKVFGEM 114 Query: 251 PERNAVSYNSIISAFIRCGEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQGFQL 430 +RN VSYN+II + R G W+LF EM GF PT++TF QGFQL Sbjct: 115 TQRNVVSYNTIIGGYSRNGSVEEAWNLFSEMRRYGFEPTQHTFAGLLSCASLKLSQGFQL 174 Query: 431 HCLMVKSGLLYSDAFPGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISSFGHHGF 610 MVKSGL ++D + GT+L+ LFGR G +D + F+EMP +NLVTWN+VIS FG++GF Sbjct: 175 QAQMVKSGLFHADPYAGTALLSLFGRNGCIDEVVCAFEEMPQKNLVTWNTVISLFGNYGF 234 Query: 611 VEESVIMFCELLRESEYPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTGSEFYTSVANS 790 EES+ +F EL+R SE SF GVLSGF L++G+Q+H L++K G + SV NS Sbjct: 235 SEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDLELGEQVHDLLIKNGFDCEVSVLNS 294 Query: 791 LVKMYVQCADVFLGEKVFEQIPVKDMVSWSIIIGTFAKSIYP 916 L+ MYV+C+ + L EK+FE V+D+VSW+ +IG AKS P Sbjct: 295 LINMYVKCSCICLAEKMFELGCVRDVVSWNTMIGALAKSERP 336 Score = 100 bits (248), Expect = 6e-19 Identities = 74/296 (25%), Positives = 133/296 (44%), Gaps = 33/296 (11%) Frame = +2 Query: 125 IHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFI-R 301 IHA +I + + +F+ + L+ YA D + + FDE+ E+N V +N++I + + Sbjct: 377 IHAKVIRN--KIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSNK 434 Query: 302 CGEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQGFQLHCLMVKSGL-------- 457 C SL M+ LG+ P E++F Q QLHCL+++ G Sbjct: 435 CFSSV---SLLKRMLQLGYCPNEFSFSAALKSSLVFELQ--QLHCLIMRMGYQQNEYVSS 489 Query: 458 ----------LYSDAF-------------PGTSLVGLFGRYGNLDGAMKLFKEMPYRNLV 568 + SDA P ++ G++ + G LF + ++V Sbjct: 490 ALITSYAKNGIISDALIFDAASNKPLLVGPSNAIAGVYNKIGQYHRTQDLFSLLEEPDIV 549 Query: 569 TWNSVISSFGHHGFVEESVIMFCELLRESEYPSERSFEGVLSGFKGLAYLQVGKQIHGLV 748 +WN +I++ +G +E +F + YP + +LS L L +G IHG + Sbjct: 550 SWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCNLALGSSIHGFI 609 Query: 749 LKTGSEFY-TSVANSLVKMYVQCADVFLGEKVFEQIPVKDMVSWSIIIGTFAKSIY 913 +KT +F T V N L+ MY +C + K+F +I +++++W+ +I + Y Sbjct: 610 IKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIERNIITWTALISALGVNGY 665 Score = 85.9 bits (211), Expect = 1e-14 Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 2/219 (0%) Frame = +2 Query: 239 FDEMPERNAVSYNSIISAFIRCGEENGVWSLFVEMMGLGFSPTEYTF-GXXXXXXXXXXF 415 F+EMP++N V++N++IS F G LF E+M G +E +F G Sbjct: 211 FEEMPQKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDL 270 Query: 416 Q-GFQLHCLMVKSGLLYSDAFPGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISS 592 + G Q+H L++K+G + SL+ ++ + + A K+F+ R++V+WN++I + Sbjct: 271 ELGEQVHDLLIKNGF-DCEVSVLNSLINMYVKCSCICLAEKMFELGCVRDVVSWNTMIGA 329 Query: 593 FGHHGFVEESVIMFCELLRESEYPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTGSEFY 772 + + +F ++ + P+E +F V++ L L G+ IH V++ E Sbjct: 330 LAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNKIESN 389 Query: 773 TSVANSLVKMYVQCADVFLGEKVFEQIPVKDMVSWSIII 889 V ++LV Y +C ++ F++I K++V W+ +I Sbjct: 390 VFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALI 428 Score = 80.9 bits (198), Expect = 4e-13 Identities = 61/233 (26%), Positives = 117/233 (50%), Gaps = 2/233 (0%) Frame = +2 Query: 119 QSIHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFI 298 + +H L+I GF D + + N+LI Y + +++K+F+ R+ VS+N++I A Sbjct: 274 EQVHDLLIKNGF--DCEVSVLNSLINMYVKCSCICLAEKMFELGCVRDVVSWNTMIGALA 331 Query: 299 RCGEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQ--GFQLHCLMVKSGLLYSDA 472 + + V LF++M G P E TF G +H ++++ + S+ Sbjct: 332 KSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRN-KIESNV 390 Query: 473 FPGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISSFGHHGFVEESVIMFCELLRE 652 F G++LV + + NL+ A F E+ +N+V WN++I + + F SV + +L+ Sbjct: 391 FVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSNKCF--SSVSLLKRMLQL 448 Query: 653 SEYPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTGSEFYTSVANSLVKMYVQ 811 P+E SF L K ++ +Q+H L+++ G + V+++L+ Y + Sbjct: 449 GYCPNEFSFSAAL---KSSLVFEL-QQLHCLIMRMGYQQNEYVSSALITSYAK 497 Score = 77.0 bits (188), Expect = 6e-12 Identities = 62/282 (21%), Positives = 124/282 (43%), Gaps = 35/282 (12%) Frame = +2 Query: 116 IQSIHALIITFGFQFDQPIFLSNNLIKSYALLDYVSIS---------------------- 229 +Q +H LI+ G+Q ++ ++S+ LI SYA +S + Sbjct: 469 LQQLHCLIMRMGYQQNE--YVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAIAGV 526 Query: 230 ----------KKVFDEMPERNAVSYNSIISAFIRCGEENGVWSLFVEMMGLGFSPTEYTF 379 + +F + E + VS+N +I+A R G+ V+ LF M P YT Sbjct: 527 YNKIGQYHRTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTV 586 Query: 380 GXXXXXXXXXX--FQGFQLHCLMVKSGLLYSDAFPGTSLVGLFGRYGNLDGAMKLFKEMP 553 G +H ++K+ + D F L+ ++G+ G ++ ++K+F ++ Sbjct: 587 VSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKII 646 Query: 554 YRNLVTWNSVISSFGHHGFVEESVIMFCELLRESEYPSERSFEGVLSGFKGLAYLQVGKQ 733 RN++TW ++IS+ G +G+ E++ +F E+ P + V S + ++ G + Sbjct: 647 ERNIITWTALISALGVNGYANEALKLFREMESLGFKPDGVALVAVFSACRHGGLVKEGME 706 Query: 734 IHGLVLKT-GSEFYTSVANSLVKMYVQCADVFLGEKVFEQIP 856 + + K+ G E + +V + +C + E+V +P Sbjct: 707 LFWQMKKSCGIEPNIDHYHCVVDLLARCGHLQEAEQVISNMP 748 >emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera] Length = 954 Score = 248 bits (634), Expect = 1e-63 Identities = 133/282 (47%), Positives = 180/282 (63%) Frame = +2 Query: 71 LLLQASTSKPPSLHTIQSIHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEM 250 LLLQA + P +L + +HAL +T QPIFL NNLI Y L +S +++VF EM Sbjct: 56 LLLQACKTAP-TLKETKPLHALTVTMASNSTQPIFLYNNLISLYVLQGELSTAREVFGEM 114 Query: 251 PERNAVSYNSIISAFIRCGEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQGFQL 430 +RN VSYN+II + R G W+LF E+ GF PT++TF QGFQL Sbjct: 115 TQRNVVSYNTIIGGYSRNGSVEEAWNLFSELRRYGFEPTQHTFAGLLSCASLKLSQGFQL 174 Query: 431 HCLMVKSGLLYSDAFPGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISSFGHHGF 610 MVKSGL ++D + GT+L+ LF R G +D + F+EMP +NLVTWN+VIS FG++GF Sbjct: 175 QAQMVKSGLFHADPYAGTALLSLFRRNGCIDEVVCAFEEMPLKNLVTWNTVISLFGNYGF 234 Query: 611 VEESVIMFCELLRESEYPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTGSEFYTSVANS 790 EES+ +F EL+R SE SF GVLSGF L++G+Q+H L++K G + SV NS Sbjct: 235 SEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDLELGEQVHDLLIKNGFDXEVSVLNS 294 Query: 791 LVKMYVQCADVFLGEKVFEQIPVKDMVSWSIIIGTFAKSIYP 916 L+ MYV+C+ + L EK+FE V+D+VSW+ +IG AKS P Sbjct: 295 LINMYVKCSCIXLAEKMFELGCVRDVVSWNTMIGALAKSERP 336 Score = 99.4 bits (246), Expect = 1e-18 Identities = 74/296 (25%), Positives = 132/296 (44%), Gaps = 33/296 (11%) Frame = +2 Query: 125 IHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFI-R 301 IHA +I + + +F+ + L+ YA D + + FDE+ E+N V +N++I + + Sbjct: 377 IHAKVIRN--KIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSNK 434 Query: 302 CGEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQGFQLHCLMVKSGL-------- 457 C SL M+ LG+ P E +F Q QLHCL+++ G Sbjct: 435 CFSSV---SLLKRMLQLGYXPNEXSFSAALKSSLVFELQ--QLHCLIMRMGYQQNEYVSS 489 Query: 458 ----------LYSDAF-------------PGTSLVGLFGRYGNLDGAMKLFKEMPYRNLV 568 + SDA P ++ G++ + G LF + ++V Sbjct: 490 ALITSYAKNGIISDALIFDAASNKPLLVGPSNAIAGVYNKIGQYHXTQDLFSLLEEPDIV 549 Query: 569 TWNSVISSFGHHGFVEESVIMFCELLRESEYPSERSFEGVLSGFKGLAYLQVGKQIHGLV 748 +WN +I++ +G +E +F + YP + +LS L L +G IHG + Sbjct: 550 SWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCNLALGSSIHGFI 609 Query: 749 LKTGSEFY-TSVANSLVKMYVQCADVFLGEKVFEQIPVKDMVSWSIIIGTFAKSIY 913 +KT +F T V N L+ MY +C + K+F +I +++++W+ +I + Y Sbjct: 610 IKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIXRNIITWTALISALGVNGY 665 Score = 84.7 bits (208), Expect = 3e-14 Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 2/219 (0%) Frame = +2 Query: 239 FDEMPERNAVSYNSIISAFIRCGEENGVWSLFVEMMGLGFSPTEYTF-GXXXXXXXXXXF 415 F+EMP +N V++N++IS F G LF E+M G +E +F G Sbjct: 211 FEEMPLKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDL 270 Query: 416 Q-GFQLHCLMVKSGLLYSDAFPGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISS 592 + G Q+H L++K+G + SL+ ++ + + A K+F+ R++V+WN++I + Sbjct: 271 ELGEQVHDLLIKNGF-DXEVSVLNSLINMYVKCSCIXLAEKMFELGCVRDVVSWNTMIGA 329 Query: 593 FGHHGFVEESVIMFCELLRESEYPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTGSEFY 772 + + +F ++ + P+E +F V++ L L G+ IH V++ E Sbjct: 330 LAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNKIESN 389 Query: 773 TSVANSLVKMYVQCADVFLGEKVFEQIPVKDMVSWSIII 889 V ++LV Y +C ++ F++I K++V W+ +I Sbjct: 390 VFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALI 428 Score = 83.2 bits (204), Expect = 8e-14 Identities = 70/297 (23%), Positives = 136/297 (45%), Gaps = 34/297 (11%) Frame = +2 Query: 119 QSIHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFI 298 + +H L+I GF D + + N+LI Y + +++K+F+ R+ VS+N++I A Sbjct: 274 EQVHDLLIKNGF--DXEVSVLNSLINMYVKCSCIXLAEKMFELGCVRDVVSWNTMIGALA 331 Query: 299 RCGEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQ--GFQLHCLMVKSGLLYSDA 472 + + V LF++M G P E TF G +H ++++ + S+ Sbjct: 332 KSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRN-KIESNV 390 Query: 473 FPGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISSFGHHGFVEESVIMFCELLRE 652 F G++LV + + NL+ A F E+ +N+V WN++I + + F SV + +L+ Sbjct: 391 FVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSNKCF--SSVSLLKRMLQL 448 Query: 653 SEYPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTG---SEFYTSV-------------- 781 P+E SF L K ++ +Q+H L+++ G +E+ +S Sbjct: 449 GYXPNEXSFSAAL---KSSLVFEL-QQLHCLIMRMGYQQNEYVSSALITSYAKNGIISDA 504 Query: 782 ---------------ANSLVKMYVQCADVFLGEKVFEQIPVKDMVSWSIIIGTFAKS 907 +N++ +Y + + +F + D+VSW+I+I A++ Sbjct: 505 LIFDAASNKPLLVGPSNAIAGVYNKIGQYHXTQDLFSLLEEPDIVSWNILIAACARN 561 Score = 73.9 bits (180), Expect = 5e-11 Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 34/210 (16%) Frame = +2 Query: 116 IQSIHALIITFGFQFDQPIFLSNNLIKSYALLDYVS------------------------ 223 +Q +H LI+ G+Q ++ ++S+ LI SYA +S Sbjct: 469 LQQLHCLIMRMGYQQNE--YVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAIAGV 526 Query: 224 --------ISKKVFDEMPERNAVSYNSIISAFIRCGEENGVWSLFVEMMGLGFSPTEYTF 379 ++ +F + E + VS+N +I+A R G+ V+ LF M P YT Sbjct: 527 YNKIGQYHXTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTV 586 Query: 380 GXXXXXXXXXX--FQGFQLHCLMVKSGLLYSDAFPGTSLVGLFGRYGNLDGAMKLFKEMP 553 G +H ++K+ + D F L+ ++G+ G ++ ++K+F ++ Sbjct: 587 VSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKII 646 Query: 554 YRNLVTWNSVISSFGHHGFVEESVIMFCEL 643 RN++TW ++IS+ G +G+ E++ +F E+ Sbjct: 647 XRNIITWTALISALGVNGYANEALKLFREM 676 >ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|222862901|gb|EEF00408.1| predicted protein [Populus trichocarpa] Length = 737 Score = 239 bits (609), Expect = 9e-61 Identities = 130/289 (44%), Positives = 179/289 (61%) Frame = +2 Query: 50 VKHQLPHLLLQASTSKPPSLHTIQSIHALIITFGFQFDQPIFLSNNLIKSYALLDYVSIS 229 +K+Q L L S SK +L T + +HAL IT G +Q F+ NN+I YA + V ++ Sbjct: 8 LKYQYRLLQLLQSCSKLRALDTTKPLHALTITIGPNPEQSTFVYNNIISFYASFNQVPMA 67 Query: 230 KKVFDEMPERNAVSYNSIISAFIRCGEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXX 409 KVFD MP RN VSYNSIIS F + G W F EM+ GF P +T Sbjct: 68 HKVFDNMPHRNKVSYNSIISCFSKYGYLEEAWRTFCEMIDCGFRPNNFTLSGLLSCASMD 127 Query: 410 XFQGFQLHCLMVKSGLLYSDAFPGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVIS 589 +G L L +K+GL SD F GT+L+GLFGR G LD A +F++MP ++LVTWNS+IS Sbjct: 128 VGRGIMLQALAIKNGLFCSDVFVGTALLGLFGRCGWLDEAFHVFEDMPDKSLVTWNSMIS 187 Query: 590 SFGHHGFVEESVIMFCELLRESEYPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTGSEF 769 GHHGFVE+ V++F +L+R+ S+ SFEGVLSG L+ G QIHGLV+K+G + Sbjct: 188 LLGHHGFVEDCVVLFRKLVRKEGSLSKCSFEGVLSGLVCEEDLEFGGQIHGLVIKSGLDC 247 Query: 770 YTSVANSLVKMYVQCADVFLGEKVFEQIPVKDMVSWSIIIGTFAKSIYP 916 V+NSL+ MY + + + EK+FE++ +D+V+W+ II F+KS P Sbjct: 248 EVLVSNSLINMYARRSSMSQVEKLFEEVDGRDVVTWNTIISAFSKSKNP 296 Score = 102 bits (253), Expect = 2e-19 Identities = 86/295 (29%), Positives = 138/295 (46%), Gaps = 34/295 (11%) Frame = +2 Query: 125 IHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFIRC 304 IH L+I G D + +SN+LI YA +S +K+F+E+ R+ V++N+IISAF + Sbjct: 236 IHGLVIKSGL--DCEVLVSNSLINMYARRSSMSQVEKLFEEVDGRDVVTWNTIISAFSKS 293 Query: 305 GEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQ--GFQLHCLMVKSGLLYSDAFP 478 +F++M G P + TF G +H +VK+ L +D + Sbjct: 294 KNPGKALEVFLKMSEDGIMPNQTTFVSVINSCTSLLVPMCGEYVHGKIVKTAL-ETDVYL 352 Query: 479 GTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISSFGHHGFVEESVIMFCELLRESE 658 G++LV + + G LD A F+E+ +N+V+WNS+I + + SV + E+L+ Sbjct: 353 GSALVDYYAKCGKLDNAHYCFREIHQKNVVSWNSLILGYANKCSF-ASVSLLLEMLKLGF 411 Query: 659 YPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTGSE----FYTSV--------------- 781 P+E SF VL K L++ KQIH L ++ G E TS+ Sbjct: 412 RPNEFSFSAVL---KSSLVLEL-KQIHSLTIRLGYENNEYVLTSLITSYGRNGLITDALI 467 Query: 782 -------------ANSLVKMYVQCADVFLGEKVFEQIPVKDMVSWSIIIGTFAKS 907 ANS+ +Y + F K Q+ D VSW+I+I A++ Sbjct: 468 FVKASETLLAVVPANSIAGIYNRSGQYFETLKFLSQLEEPDTVSWNIVIAACARN 522 Score = 100 bits (249), Expect = 5e-19 Identities = 69/259 (26%), Positives = 134/259 (51%), Gaps = 3/259 (1%) Frame = +2 Query: 125 IHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFIRC 304 + AL I G F +F+ L+ + ++ + VF++MP+++ V++NS+IS Sbjct: 134 LQALAIKNGL-FCSDVFVGTALLGLFGRCGWLDEAFHVFEDMPDKSLVTWNSMISLLGHH 192 Query: 305 GEENGVWSLFVEMMGLGFSPTEYTF-GXXXXXXXXXXFQ-GFQLHCLMVKSGLLYSDAFP 478 G LF +++ S ++ +F G + G Q+H L++KSGL + Sbjct: 193 GFVEDCVVLFRKLVRKEGSLSKCSFEGVLSGLVCEEDLEFGGQIHGLVIKSGL-DCEVLV 251 Query: 479 GTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISSFGHHGFVEESVIMFCELLRESE 658 SL+ ++ R ++ KLF+E+ R++VTWN++IS+F +++ +F ++ + Sbjct: 252 SNSLINMYARRSSMSQVEKLFEEVDGRDVVTWNTIISAFSKSKNPGKALEVFLKMSEDGI 311 Query: 659 YPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTGSEFYTSVANSLVKMYVQCADVFLGEK 838 P++ +F V++ L G+ +HG ++KT E + ++LV Y +C + Sbjct: 312 MPNQTTFVSVINSCTSLLVPMCGEYVHGKIVKTALETDVYLGSALVDYYAKCGKLDNAHY 371 Query: 839 VFEQIPVKDMVSW-SIIIG 892 F +I K++VSW S+I+G Sbjct: 372 CFREIHQKNVVSWNSLILG 390 Score = 94.0 bits (232), Expect = 4e-17 Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 32/287 (11%) Frame = +2 Query: 125 IHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFIRC 304 +H I+ + D ++L + L+ YA + + F E+ ++N VS+NS+I + Sbjct: 337 VHGKIVKTALETD--VYLGSALVDYYAKCGKLDNAHYCFREIHQKNVVSWNSLILGYANK 394 Query: 305 GEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQGFQLHCLMVKSGL--------- 457 V SL +EM+ LGF P E++F + Q+H L ++ G Sbjct: 395 CSFASV-SLLLEMLKLGFRPNEFSFSAVLKSSLVLELK--QIHSLTIRLGYENNEYVLTS 451 Query: 458 ---------LYSDAF-------------PGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVT 571 L +DA P S+ G++ R G +K ++ + V+ Sbjct: 452 LITSYGRNGLITDALIFVKASETLLAVVPANSIAGIYNRSGQYFETLKFLSQLEEPDTVS 511 Query: 572 WNSVISSFGHHGFVEESVIMFCELLRESEYPSERSFEGVLSGFKGLAYLQVGKQIHGLVL 751 WN VI++ +G E +F + P ++ +L + L +G IHGL++ Sbjct: 512 WNIVIAACARNGNYNEVFELFKHMRVAQMLPDNYTYTSLLCVSSKVCNLALGSSIHGLLI 571 Query: 752 KTG-SEFYTSVANSLVKMYVQCADVFLGEKVFEQIPVKDMVSWSIII 889 KT S F V N L+ MY +C ++ K+F+ + +++++W+ +I Sbjct: 572 KTNFSYFDIVVRNVLIDMYGKCGNLESSAKIFDSMTERNLITWTALI 618 Score = 84.7 bits (208), Expect = 3e-14 Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 2/210 (0%) Frame = +2 Query: 233 KVFDEMPERNAVSYNSIISAFIRCGEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXX 412 K ++ E + VS+N +I+A R G N V+ LF M P YT+ Sbjct: 499 KFLSQLEEPDTVSWNIVIAACARNGNYNEVFELFKHMRVAQMLPDNYTYTSLLCVSSKVC 558 Query: 413 --FQGFQLHCLMVKSGLLYSDAFPGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVI 586 G +H L++K+ Y D L+ ++G+ GNL+ + K+F M RNL+TW ++I Sbjct: 559 NLALGSSIHGLLIKTNFSYFDIVVRNVLIDMYGKCGNLESSAKIFDSMTERNLITWTALI 618 Query: 587 SSFGHHGFVEESVIMFCELLRESEYPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTGSE 766 S+ G +G +E++ F ++ P + +F VL+ + A ++ G Q+ G + E Sbjct: 619 SALGINGCAQEALERFNDMEFLGSRPDKVAFIAVLTACRHGALVREGMQLFGKMNNYHIE 678 Query: 767 FYTSVANSLVKMYVQCADVFLGEKVFEQIP 856 + LV + + + EKV +P Sbjct: 679 PDMDHYHCLVDLLARNGHLEEAEKVISCMP 708 >ref|XP_002525134.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223535593|gb|EEF37261.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 792 Score = 231 bits (588), Expect = 2e-58 Identities = 125/282 (44%), Positives = 175/282 (62%), Gaps = 1/282 (0%) Frame = +2 Query: 74 LLQASTSKPPSLHTIQSIHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMP 253 LL A T + SL T + +HAL IT G +QP +L NN+I Y +S+++KVFD MP Sbjct: 17 LLHACT-RARSLATTKPLHALTITLGPNPNQPAYLFNNIISLYTSFSELSLARKVFDNMP 75 Query: 254 ERNAVSYNSIISAFIRCGEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQGFQLH 433 +R+ SYNSII+++ + G +F M GF P +T G QL Sbjct: 76 QRSIASYNSIITSYCKYGYLEEALGVFSRMRDCGFRPNNFTLSGLLSCSKMDLSIGLQLQ 135 Query: 434 CLMVKSGLLYSDAFPGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISSFGHHGFV 613 L +K+GL Y DAF GT+L+ +FGR+G L+ A+ +F+++P ++LVTWNS+I FG HG+V Sbjct: 136 ALAMKNGLFYIDAFVGTALLNVFGRWGWLNEALHVFEDLPIKSLVTWNSIICLFGQHGYV 195 Query: 614 EESVIMFCELLRE-SEYPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTGSEFYTSVANS 790 E+ +I FCEL RE SE SF GVLSG YL+ G+QIH LV KTG ++ SV NS Sbjct: 196 EDCIIYFCELHREIGCCLSECSFVGVLSGLVCGKYLEFGEQIHSLVTKTGFDYTVSVVNS 255 Query: 791 LVKMYVQCADVFLGEKVFEQIPVKDMVSWSIIIGTFAKSIYP 916 ++ +YV+CA + L EK FE+ KD+V+W+ +I AKS P Sbjct: 256 VISVYVKCATLHLAEKKFEEAACKDIVTWNTMIVALAKSEKP 297 Score = 100 bits (248), Expect = 6e-19 Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 34/289 (11%) Frame = +2 Query: 125 IHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFIRC 304 IHA +I F D +++ + L+ YA D + ++ F ++ E+N VS+NS+I + C Sbjct: 338 IHAKVIMHAFDTD--VYVGSALVDYYAKCDKLDDARCCFVKIHEKNVVSWNSLI---LGC 392 Query: 305 GEE--NGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQGFQLHCLMVKSGL------- 457 + SL VEM+ G+ P E++F Q QLHCL+++ G Sbjct: 393 ANKCPYAAISLLVEMLQCGYQPNEFSFSAVLISSSILELQ--QLHCLIIRMGYDNNDYVL 450 Query: 458 -----------LYSDAF-------------PGTSLVGLFGRYGNLDGAMKLFKEMPYRNL 565 L SDA P ++ G++ + G+ ++L ++ + Sbjct: 451 SSLITSYGRNGLISDALVFLAASETPLAAVPSNNVAGIYNKAGHYYKTLELLSQLEEPDN 510 Query: 566 VTWNSVISSFGHHGFVEESVIMFCELLRESEYPSERSFEGVLSGFKGLAYLQVGKQIHGL 745 V+WN I++ +G +E +F ++L +P ++ +LS + L +G IHG Sbjct: 511 VSWNIAIAACARNGNYKEVFELFKQMLVAQIHPDNYTYVSLLSSSSQICDLALGSSIHGF 570 Query: 746 VLKTG-SEFYTSVANSLVKMYVQCADVFLGEKVFEQIPVKDMVSWSIII 889 ++K S T V N L+ MY +C + K+F + +++++W+ +I Sbjct: 571 LIKNNFSSCDTFVCNVLLDMYGKCGCLRSSVKIFNSMRDRNLITWTALI 619 Score = 76.6 bits (187), Expect = 7e-12 Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 2/228 (0%) Frame = +2 Query: 179 SNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFIRCGEENGVWSLFVEMMGLGF 358 SNN+ Y + + ++ ++ E + VS+N I+A R G V+ LF +M+ Sbjct: 482 SNNVAGIYNKAGHYYKTLELLSQLEEPDNVSWNIAIAACARNGNYKEVFELFKQMLVAQI 541 Query: 359 SPTEYTFGXXXXXXXXXX--FQGFQLHCLMVKSGLLYSDAFPGTSLVGLFGRYGNLDGAM 532 P YT+ G +H ++K+ D F L+ ++G+ G L ++ Sbjct: 542 HPDNYTYVSLLSSSSQICDLALGSSIHGFLIKNNFSSCDTFVCNVLLDMYGKCGCLRSSV 601 Query: 533 KLFKEMPYRNLVTWNSVISSFGHHGFVEESVIMFCELLRESEYPSERSFEGVLSGFKGLA 712 K+F M RNL+TW ++IS+ G + E++ F ++ + P + +F VL+ + A Sbjct: 602 KIFNSMRDRNLITWTALISALGINSCAHEALERFKDMEHQGLRPDKVAFIAVLTACRHGA 661 Query: 713 YLQVGKQIHGLVLKTGSEFYTSVANSLVKMYVQCADVFLGEKVFEQIP 856 + G ++ + G E + LV ++ + V EKV +P Sbjct: 662 LVGEGIELFKKMKSYGLEPEMDHYHCLVDLFSRHGHVKEAEKVISSMP 709 Score = 74.3 bits (181), Expect = 4e-11 Identities = 60/251 (23%), Positives = 122/251 (48%), Gaps = 4/251 (1%) Frame = +2 Query: 173 FLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFIRCGEENGVWSLFVEM-MG 349 F+ L+ + +++ + VF+++P ++ V++NSII F + G F E+ Sbjct: 149 FVGTALLNVFGRWGWLNEALHVFEDLPIKSLVTWNSIICLFGQHGYVEDCIIYFCELHRE 208 Query: 350 LGFSPTEYTFGXXXXXXXXXXFQGF--QLHCLMVKSGLLYSDAFPGTSLVGLFGRYGNLD 523 +G +E +F + F Q+H L+ K+G Y+ + S++ ++ + L Sbjct: 209 IGCCLSECSFVGVLSGLVCGKYLEFGEQIHSLVTKTGFDYTVSVVN-SVISVYVKCATLH 267 Query: 524 GAMKLFKEMPYRNLVTWNSVISSFGHHGFVEESVIMFCELLRESEYPSERSFEGVLSGFK 703 A K F+E +++VTWN++I + +++ +F ++ R++ P++ +F ++S Sbjct: 268 LAEKKFEEAACKDIVTWNTMIVALAKSEKPIKALELFFKMPRDAIRPNQITFASLISSCA 327 Query: 704 GLAYLQVGKQIHGLVLKTGSEFYTSVANSLVKMYVQCADVFLGEKVFEQIPVKDMVSW-S 880 L + IH V+ + V ++LV Y +C + F +I K++VSW S Sbjct: 328 NLQIPMYAEFIHAKVIMHAFDTDVYVGSALVDYYAKCDKLDDARCCFVKIHEKNVVSWNS 387 Query: 881 IIIGTFAKSIY 913 +I+G K Y Sbjct: 388 LILGCANKCPY 398 >ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containing protein At3g58590-like [Glycine max] Length = 732 Score = 215 bits (548), Expect = 1e-53 Identities = 116/272 (42%), Positives = 166/272 (61%), Gaps = 1/272 (0%) Frame = +2 Query: 104 SLHTIQSIHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSI 283 SL + +HAL IT G Q IF+ NN+I SY L V ++K+FD +P R VSYN++ Sbjct: 26 SLDATKCLHALSITMGHIPKQSIFIHNNIISSYIALGEVLNARKLFDALPHRTVVSYNTL 85 Query: 284 ISAFIRCGEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQGFQLHCLMVKSGLLY 463 I+A+ R G + W+L M G GF+PT+YT +G QL L +++GLL Sbjct: 86 ITAYCRRGNVDDAWNLLCHMRGSGFAPTQYTLTGLLSCELLNHSRGVQLQALSIRNGLLD 145 Query: 464 SDAFPGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISSFGHHGFVEESVIMFCEL 643 +DAF GT+L+GLFGR G D F++MP ++LVTWNS++S +GFVEE I+F +L Sbjct: 146 ADAFVGTALLGLFGRLGCWDELFLAFEDMPQKSLVTWNSMVSLLARNGFVEECKILFRDL 205 Query: 644 LRESEYPSERSFEGVLSGF-KGLAYLQVGKQIHGLVLKTGSEFYTSVANSLVKMYVQCAD 820 + SE S VLSG L+ G+QIHGL++K G + ANSL+ +YV+C Sbjct: 206 VGTGISLSEGSVVAVLSGLVDSEEDLEYGEQIHGLMVKCGFGCEITAANSLISVYVRCKA 265 Query: 821 VFLGEKVFEQIPVKDMVSWSIIIGTFAKSIYP 916 +F E++FEQ+PV+++VSW+ +I KS P Sbjct: 266 MFAVERLFEQVPVENVVSWNTVIDALVKSERP 297 Score = 110 bits (275), Expect = 5e-22 Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 32/289 (11%) Frame = +2 Query: 119 QSIHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFI 298 +S+HA II GF+ D + + L+ Y+ D + K FD++ E+N VS+N++I+ + Sbjct: 336 ESVHAKIIRSGFESD--VIVGTALVDFYSKCDKFISAHKCFDQIEEKNVVSWNALITGYS 393 Query: 299 RCGEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQGFQLHCLMVKSG-------- 454 + L +M+ LG+SP E++F QLH L+++SG Sbjct: 394 NICSSTSIL-LLQKMLQLGYSPNEFSFSAVLKSSSMSNLH--QLHGLIIRSGYESNEYVL 450 Query: 455 ----------------LLYSDAF-------PGTSLVGLFGRYGNLDGAMKLFKEMPYRNL 565 L + + F P + G++ R +KL + + Sbjct: 451 SSLVMAYTRNGLINEALSFVEEFNNPLPVVPSNIIAGIYNRTSLYHETIKLLSLLEKPDA 510 Query: 566 VTWNSVISSFGHHGFVEESVIMFCELLRESEYPSERSFEGVLSGFKGLAYLQVGKQIHGL 745 V+WN VIS+ +E +F + +P +F ++S L L +G +HGL Sbjct: 511 VSWNIVISACARSNSYDEVFALFKHMHSACIHPDSYTFMSIISVCTKLCLLNLGSSLHGL 570 Query: 746 VLKTG-SEFYTSVANSLVKMYVQCADVFLGEKVFEQIPVKDMVSWSIII 889 ++KT S + T + N L+ MY +C + KVFE+I K++++W+ +I Sbjct: 571 IIKTNLSNYDTFLGNVLIDMYGKCGSIDSSVKVFEEIMYKNIITWTALI 619 Score = 95.1 bits (235), Expect = 2e-17 Identities = 68/258 (26%), Positives = 120/258 (46%), Gaps = 3/258 (1%) Frame = +2 Query: 125 IHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFIRC 304 + AL I G D F+ L+ + L F++MP+++ V++NS++S R Sbjct: 134 LQALSIRNGL-LDADAFVGTALLGLFGRLGCWDELFLAFEDMPQKSLVTWNSMVSLLARN 192 Query: 305 GEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQ---GFQLHCLMVKSGLLYSDAF 475 G LF +++G G S +E + G Q+H LMVK G + Sbjct: 193 GFVEECKILFRDLVGTGISLSEGSVVAVLSGLVDSEEDLEYGEQIHGLMVKCGF-GCEIT 251 Query: 476 PGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISSFGHHGFVEESVIMFCELLRES 655 SL+ ++ R + +LF+++P N+V+WN+VI + ++ +F + R Sbjct: 252 AANSLISVYVRCKAMFAVERLFEQVPVENVVSWNTVIDALVKSERPMMALDLFLNMARRG 311 Query: 656 EYPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTGSEFYTSVANSLVKMYVQCADVFLGE 835 PS+ +F V+ L G+ +H ++++G E V +LV Y +C Sbjct: 312 LMPSQATFVAVIHSCTSLRNSVCGESVHAKIIRSGFESDVIVGTALVDFYSKCDKFISAH 371 Query: 836 KVFEQIPVKDMVSWSIII 889 K F+QI K++VSW+ +I Sbjct: 372 KCFDQIEEKNVVSWNALI 389 Score = 91.7 bits (226), Expect = 2e-16 Identities = 63/233 (27%), Positives = 117/233 (50%), Gaps = 2/233 (0%) Frame = +2 Query: 119 QSIHALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFI 298 + IH L++ GF + I +N+LI Y + +++F+++P N VS+N++I A + Sbjct: 235 EQIHGLMVKCGFGCE--ITAANSLISVYVRCKAMFAVERLFEQVPVENVVSWNTVIDALV 292 Query: 299 RCGEENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQ--GFQLHCLMVKSGLLYSDA 472 + LF+ M G P++ TF G +H +++SG SD Sbjct: 293 KSERPMMALDLFLNMARRGLMPSQATFVAVIHSCTSLRNSVCGESVHAKIIRSGF-ESDV 351 Query: 473 FPGTSLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISSFGHHGFVEESVIMFCELLRE 652 GT+LV + + A K F ++ +N+V+WN++I+ + + S+++ ++L+ Sbjct: 352 IVGTALVDFYSKCDKFISAHKCFDQIEEKNVVSWNALITGYSNI-CSSTSILLLQKMLQL 410 Query: 653 SEYPSERSFEGVLSGFKGLAYLQVGKQIHGLVLKTGSEFYTSVANSLVKMYVQ 811 P+E SF VL ++ L Q+HGL++++G E V +SLV Y + Sbjct: 411 GYSPNEFSFSAVLKS-SSMSNLH---QLHGLIIRSGYESNEYVLSSLVMAYTR 459 Score = 89.7 bits (221), Expect = 8e-16 Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 2/204 (0%) Frame = +2 Query: 131 ALIITFGFQFDQPIFLSNNLIKSYALLDYVSISKKVFDEMPERNAVSYNSIISAFIRCGE 310 AL F P+ SN + Y + K+ + + +AVS+N +ISA R Sbjct: 466 ALSFVEEFNNPLPVVPSNIIAGIYNRTSLYHETIKLLSLLEKPDAVSWNIVISACARSNS 525 Query: 311 ENGVWSLFVEMMGLGFSPTEYTFGXXXXXXXXXXFQ--GFQLHCLMVKSGLLYSDAFPGT 484 + V++LF M P YTF G LH L++K+ L D F G Sbjct: 526 YDEVFALFKHMHSACIHPDSYTFMSIISVCTKLCLLNLGSSLHGLIIKTNLSNYDTFLGN 585 Query: 485 SLVGLFGRYGNLDGAMKLFKEMPYRNLVTWNSVISSFGHHGFVEESVIMFCELLRESEYP 664 L+ ++G+ G++D ++K+F+E+ Y+N++TW ++I++ G +GF E+V+ F L P Sbjct: 586 VLIDMYGKCGSIDSSVKVFEEIMYKNIITWTALITALGLNGFAHEAVMRFQNLELMGLKP 645 Query: 665 SERSFEGVLSGFKGLAYLQVGKQI 736 + VLS + + G +I Sbjct: 646 DALALRAVLSSCRYGGLVNEGMEI 669