BLASTX nr result

ID: Coptis25_contig00026677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026677
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530481.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   165   4e-39
emb|CBI29251.3| unnamed protein product [Vitis vinifera]              163   1e-38
ref|XP_003551803.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   163   2e-38
ref|XP_003621622.1| ADP-ribosylation factor GTPase-activating pr...   159   2e-37
ref|XP_004167355.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   159   3e-37

>ref|XP_003530481.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
           AGD3-like [Glycine max]
          Length = 1228

 Score =  165 bits (417), Expect = 4e-39
 Identities = 82/130 (63%), Positives = 94/130 (72%)
 Frame = -3

Query: 391 DWIEKITGVIASLLSSQTPLQCLPVSPMGTGRYXXXXXXXXXXXXXXFDNPATEECGSEK 212
           DWIEKITGVIASLLSSQ P + LP SPMG+G +               D+ A EEC +++
Sbjct: 418 DWIEKITGVIASLLSSQIPERMLPASPMGSGHHRSTSESSSFESSDF-DHYAVEECAADR 476

Query: 211 IFIAGHHERSCRNSHQQRLNVKSEKPIDVLRRVCGNDVCADCGALDPDWASLNLGILICI 32
            F + H ER  R+  QQR   KSEKPIDVLRRVCGND CADCGA +PDWASLNLG+L+CI
Sbjct: 477 SFTSAHLERPSRSLQQQRSCTKSEKPIDVLRRVCGNDKCADCGAPEPDWASLNLGVLVCI 536

Query: 31  ECSGVHRNLG 2
           ECSGVHRNLG
Sbjct: 537 ECSGVHRNLG 546


>emb|CBI29251.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  163 bits (413), Expect = 1e-38
 Identities = 81/130 (62%), Positives = 92/130 (70%)
 Frame = -3

Query: 391 DWIEKITGVIASLLSSQTPLQCLPVSPMGTGRYXXXXXXXXXXXXXXFDNPATEECGSEK 212
           DWIEKITGVIASLLSSQ P +CLP+SPMG+  +               D+ A EE  SE+
Sbjct: 418 DWIEKITGVIASLLSSQAPERCLPISPMGSSHHRSASESSSYESTDF-DHTAVEEYTSER 476

Query: 211 IFIAGHHERSCRNSHQQRLNVKSEKPIDVLRRVCGNDVCADCGALDPDWASLNLGILICI 32
                HHER  +   Q R  +KSEKPIDVLRRVCGND CADCGA +PDWASLNLG+L+CI
Sbjct: 477 SSATAHHERPSKGLQQIRSCIKSEKPIDVLRRVCGNDKCADCGAPEPDWASLNLGVLVCI 536

Query: 31  ECSGVHRNLG 2
           ECSGVHRNLG
Sbjct: 537 ECSGVHRNLG 546


>ref|XP_003551803.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
           AGD3-like [Glycine max]
          Length = 1231

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/130 (62%), Positives = 94/130 (72%)
 Frame = -3

Query: 391 DWIEKITGVIASLLSSQTPLQCLPVSPMGTGRYXXXXXXXXXXXXXXFDNPATEECGSEK 212
           DWIEKITGVIASLLSSQ P + LP SPMG+G +               D+ A EEC +++
Sbjct: 418 DWIEKITGVIASLLSSQIPDRMLPASPMGSGHHRSTSESSSFESSDF-DHSAVEECAADR 476

Query: 211 IFIAGHHERSCRNSHQQRLNVKSEKPIDVLRRVCGNDVCADCGALDPDWASLNLGILICI 32
            F + + ER  R+  QQR   KSEKPIDVLRRVCGND CADCGA +PDWASLNLG+L+CI
Sbjct: 477 SFTSAYLERPSRSLQQQRSCTKSEKPIDVLRRVCGNDKCADCGAPEPDWASLNLGVLVCI 536

Query: 31  ECSGVHRNLG 2
           ECSGVHRNLG
Sbjct: 537 ECSGVHRNLG 546


>ref|XP_003621622.1| ADP-ribosylation factor GTPase-activating protein AGD3 [Medicago
           truncatula] gi|355496637|gb|AES77840.1| ADP-ribosylation
           factor GTPase-activating protein AGD3 [Medicago
           truncatula]
          Length = 832

 Score =  159 bits (402), Expect = 2e-37
 Identities = 81/130 (62%), Positives = 96/130 (73%)
 Frame = -3

Query: 391 DWIEKITGVIASLLSSQTPLQCLPVSPMGTGRYXXXXXXXXXXXXXXFDNPATEECGSEK 212
           DWIEKITGVIASLLSSQ P + LP SPMG+G +              FD+ A EE  +++
Sbjct: 420 DWIEKITGVIASLLSSQIPERLLPASPMGSG-HLRSTSESSSFESSDFDHCAVEESAADR 478

Query: 211 IFIAGHHERSCRNSHQQRLNVKSEKPIDVLRRVCGNDVCADCGALDPDWASLNLGILICI 32
            F++ H ER+ RN +QQR   KSEKPI+VLRRV GND CADCGA +PDWASLNLG+L+CI
Sbjct: 479 CFVSSHLERASRNLNQQRSCNKSEKPIEVLRRVIGNDKCADCGAPEPDWASLNLGVLVCI 538

Query: 31  ECSGVHRNLG 2
           ECSGVHRNLG
Sbjct: 539 ECSGVHRNLG 548


>ref|XP_004167355.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
           AGD3-like, partial [Cucumis sativus]
          Length = 1194

 Score =  159 bits (401), Expect = 3e-37
 Identities = 80/130 (61%), Positives = 91/130 (70%)
 Frame = -3

Query: 391 DWIEKITGVIASLLSSQTPLQCLPVSPMGTGRYXXXXXXXXXXXXXXFDNPATEECGSEK 212
           DWIEKITGVIASLLSSQ P +CL  SPMG+G +               D  A EE  SE+
Sbjct: 403 DWIEKITGVIASLLSSQAPERCLAGSPMGSGHHRSTSESSSFESSDF-DQTAVEEYTSER 461

Query: 211 IFIAGHHERSCRNSHQQRLNVKSEKPIDVLRRVCGNDVCADCGALDPDWASLNLGILICI 32
              + H +R  RN  QQR  +K EKPID+LRRVCGND CADCGA +PDWASLNLG+L+CI
Sbjct: 462 SLSSSHMDRPSRNLQQQRSVMKIEKPIDILRRVCGNDKCADCGAPEPDWASLNLGVLVCI 521

Query: 31  ECSGVHRNLG 2
           ECSGVHRNLG
Sbjct: 522 ECSGVHRNLG 531


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