BLASTX nr result

ID: Coptis25_contig00026627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026627
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001148009.1| cationic amino acid transporter 4 [Zea mays]...    67   2e-09
ref|XP_002443551.1| hypothetical protein SORBIDRAFT_08g021380 [S...    60   1e-07
ref|XP_003532802.1| PREDICTED: cationic amino acid transporter 3...    59   5e-07
ref|XP_003524242.1| PREDICTED: uncharacterized amino acid permea...    58   7e-07
ref|XP_002869906.1| hypothetical protein ARALYDRAFT_329490 [Arab...    58   7e-07

>ref|NP_001148009.1| cationic amino acid transporter 4 [Zea mays]
           gi|195615096|gb|ACG29378.1| cationic amino acid
           transporter 4 [Zea mays] gi|414878003|tpg|DAA55134.1|
           TPA: cationic amino acid transporter 4 [Zea mays]
          Length = 600

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 9/68 (13%)
 Frame = +3

Query: 18  HGKAWKEVGFKLNNQVATLSLDETELN*MKGR-----KKTLKW*DLIWFG----IGSGIF 170
           +G+A  E G +L ++V T S+D+TE+N ++GR     ++TL W DLIWFG    IGSGIF
Sbjct: 31  YGQALLETGPRLRDRVTTRSMDDTEVNEVRGRSGADMRRTLTWWDLIWFGIGAVIGSGIF 90

Query: 171 ALTGQEAK 194
            LTGQEAK
Sbjct: 91  VLTGQEAK 98


>ref|XP_002443551.1| hypothetical protein SORBIDRAFT_08g021380 [Sorghum bicolor]
           gi|241944244|gb|EES17389.1| hypothetical protein
           SORBIDRAFT_08g021380 [Sorghum bicolor]
          Length = 598

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 9/68 (13%)
 Frame = +3

Query: 18  HGKAWKEVGFKLNNQVATLSLDETELN*MKGR-----KKTLKW*DLIWFG----IGSGIF 170
           +G+A  E G +L +++   SLD TE+N ++GR     ++ L W DLIWFG    IG+GIF
Sbjct: 34  YGRALLETGPRLRDRLTARSLDATEVNEVRGRSGADMRRNLTWWDLIWFGIGAVIGAGIF 93

Query: 171 ALTGQEAK 194
            LTGQEAK
Sbjct: 94  VLTGQEAK 101


>ref|XP_003532802.1| PREDICTED: cationic amino acid transporter 3-like [Glycine max]
          Length = 601

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 9/69 (13%)
 Frame = +3

Query: 15  THGKAWKEVGFKLNNQVATLSLDETELN*MKGR-----KKTLKW*DLIWFG----IGSGI 167
           ++G A +E  +K  N+V T S DETE+  MKGR     KKTL   DLIWFG    IGSGI
Sbjct: 34  SYGIALRETPWKFKNRVMTRSKDETEVVEMKGRSSNEMKKTLNSWDLIWFGIGAVIGSGI 93

Query: 168 FALTGQEAK 194
           F +TG EA+
Sbjct: 94  FVITGLEAR 102


>ref|XP_003524242.1| PREDICTED: uncharacterized amino acid permease YfnA-like [Glycine
           max]
          Length = 670

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 9/68 (13%)
 Frame = +3

Query: 18  HGKAWKEVGFKLNNQVATLSLDETELN*MKGR-----KKTLKW*DLIWFG----IGSGIF 170
           +GKA +E  ++  ++V T S DETE+  MKGR     KKTL   DLIWFG    IGSGIF
Sbjct: 35  YGKALRETPWRFKDRVMTRSKDETEVVEMKGRSGNEMKKTLNSWDLIWFGIGAVIGSGIF 94

Query: 171 ALTGQEAK 194
            +TG EA+
Sbjct: 95  VITGLEAR 102


>ref|XP_002869906.1| hypothetical protein ARALYDRAFT_329490 [Arabidopsis lyrata subsp.
           lyrata] gi|297315742|gb|EFH46165.1| hypothetical protein
           ARALYDRAFT_329490 [Arabidopsis lyrata subsp. lyrata]
          Length = 599

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 9/66 (13%)
 Frame = +3

Query: 24  KAWKEVGFKLNNQVATLSLDETELN*MKGR-----KKTLKW*DLIWFG----IGSGIFAL 176
           KA KE   +  +++ T SLD  E+N MK R     KKTL W DL+WFG    IGSGIF L
Sbjct: 38  KALKETPSRFMDRIMTRSLDSDEINEMKARSGHEMKKTLTWWDLMWFGIGAVIGSGIFVL 97

Query: 177 TGQEAK 194
           TG EA+
Sbjct: 98  TGLEAR 103


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