BLASTX nr result

ID: Coptis25_contig00026602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026602
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139006.1| PREDICTED: high mobility group B protein 15-...   105   5e-21
ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-...   104   1e-20
emb|CBI17313.3| unnamed protein product [Vitis vinifera]              104   2e-20
ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-...   104   2e-20
emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]   104   2e-20

>ref|XP_004139006.1| PREDICTED: high mobility group B protein 15-like [Cucumis sativus]
           gi|449530303|ref|XP_004172135.1| PREDICTED: high
           mobility group B protein 15-like [Cucumis sativus]
          Length = 491

 Score =  105 bits (263), Expect = 5e-21
 Identities = 65/169 (38%), Positives = 99/169 (58%), Gaps = 8/169 (4%)
 Frame = +2

Query: 2   KMIGELWSKVTETEKAVYQERGLKDKERYKCEMLVYKENLKRGQIISDAVPIQQRLAPPE 181
           +MIG+LW+K+ E+E+ VYQE+ +KDKERY+ EM+ Y+E L+ GQIISDAVP+QQRL  P+
Sbjct: 300 RMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPD 359

Query: 182 VLMV--ERDEKMEVGEEDKFETE----EDDSGEDQMEDDSIHTRENGSSLGGSDSEEKIA 343
           + MV  +++E+ E GE    + +    E DSGE + E+     +E        D E+   
Sbjct: 360 LNMVYGDKNEETEGGESQTPDHDTSYVEGDSGEYKTEE-----KEEDEEDDEEDEEDDSE 414

Query: 344 DTVSEMEI-SVGVENKIESDNVATKDDGFK-LRKRDQNDGDERNVQQRD 484
           +  S   I +V V   +E +   T+  G + +RK     GD++ V   D
Sbjct: 415 EDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESSTVGDKKEVLAGD 463


>ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
          Length = 425

 Score =  104 bits (260), Expect = 1e-20
 Identities = 50/92 (54%), Positives = 66/92 (71%)
 Frame = +2

Query: 2   KMIGELWSKVTETEKAVYQERGLKDKERYKCEMLVYKENLKRGQIISDAVPIQQRLAPPE 181
           +MIGELW+K+ E+EK VYQE+ +KDKERY+ EM  Y+E  K GQ+ISDAVP+QQRL  P+
Sbjct: 297 RMIGELWNKLKESEKTVYQEKAMKDKERYRAEMEDYREKQKMGQVISDAVPLQQRLPEPD 356

Query: 182 VLMVERDEKMEVGEEDKFETEEDDSGEDQMED 277
             M++ D KM+  E D  +T E+ SG    ED
Sbjct: 357 ADMLDVDIKMDEAEGDSPQTPEESSGGSDYED 388


>emb|CBI17313.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  104 bits (259), Expect = 2e-20
 Identities = 55/95 (57%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
 Frame = +2

Query: 2   KMIGELWSKVTETEKAVYQERGLKDKERYKCEMLVYKENLKRGQIISDAVPIQQRLAPPE 181
           +MIGELW+K+ E EKAVYQE+ +KDKERY+ EM  Y+E LK GQIISDAVPIQQRL   +
Sbjct: 322 RMIGELWTKLKENEKAVYQEKAVKDKERYRVEMEDYRERLKMGQIISDAVPIQQRLPHAD 381

Query: 182 VLMVERDEK--MEVGEEDKFETEEDDSGEDQMEDD 280
           V MVE + K  ME GE  +    E  SG+   +DD
Sbjct: 382 VDMVEAEAKTEMEGGESPQTPENESSSGKTDSDDD 416


>ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-like [Vitis vinifera]
          Length = 482

 Score =  104 bits (259), Expect = 2e-20
 Identities = 55/95 (57%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
 Frame = +2

Query: 2   KMIGELWSKVTETEKAVYQERGLKDKERYKCEMLVYKENLKRGQIISDAVPIQQRLAPPE 181
           +MIGELW+K+ E EKAVYQE+ +KDKERY+ EM  Y+E LK GQIISDAVPIQQRL   +
Sbjct: 321 RMIGELWTKLKENEKAVYQEKAVKDKERYRVEMEDYRERLKMGQIISDAVPIQQRLPHAD 380

Query: 182 VLMVERDEK--MEVGEEDKFETEEDDSGEDQMEDD 280
           V MVE + K  ME GE  +    E  SG+   +DD
Sbjct: 381 VDMVEAEAKTEMEGGESPQTPENESSSGKTDSDDD 415


>emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]
          Length = 461

 Score =  104 bits (259), Expect = 2e-20
 Identities = 55/95 (57%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
 Frame = +2

Query: 2   KMIGELWSKVTETEKAVYQERGLKDKERYKCEMLVYKENLKRGQIISDAVPIQQRLAPPE 181
           +MIGELW+K+ E EKAVYQE+ +KDKERY+ EM  Y+E LK GQIISDAVPIQQRL   +
Sbjct: 300 RMIGELWTKLKENEKAVYQEKAVKDKERYRVEMEDYRERLKMGQIISDAVPIQQRLPHAD 359

Query: 182 VLMVERDEK--MEVGEEDKFETEEDDSGEDQMEDD 280
           V MVE + K  ME GE  +    E  SG+   +DD
Sbjct: 360 VDMVEAEAKTEMEGGESPQTPENESSSGKTDSDDD 394


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