BLASTX nr result

ID: Coptis25_contig00026596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026596
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34793.3| unnamed protein product [Vitis vinifera]              147   2e-33
ref|XP_002281705.1| PREDICTED: uncharacterized protein LOC100256...   147   2e-33
ref|XP_002310984.1| predicted protein [Populus trichocarpa] gi|2...   143   3e-32
ref|XP_002514464.1| conserved hypothetical protein [Ricinus comm...   134   1e-29
ref|XP_004147986.1| PREDICTED: uncharacterized protein LOC101212...   128   8e-28

>emb|CBI34793.3| unnamed protein product [Vitis vinifera]
          Length = 829

 Score =  147 bits (370), Expect = 2e-33
 Identities = 89/204 (43%), Positives = 115/204 (56%), Gaps = 6/204 (2%)
 Frame = +3

Query: 51  RAIIQAWAELRDSLHHQSFN---FQSLQTLINSQTSLHVADPQAKXXXXXXXXXXXXXXX 221
           RAIIQAW ELRDSL +QSF+   FQSL+TL +SQ+SL+VADPQA+               
Sbjct: 37  RAIIQAWTELRDSLQYQSFHPNHFQSLRTLFDSQSSLYVADPQARLLLSILSSSNLSLPH 96

Query: 222 XXXXXXFFKLLYIWLRKSSKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI--- 392
                 F +LLYIW+RKS+KP                                   +   
Sbjct: 97  ESYPF-FLRLLYIWVRKSTKPSSVLVDSAVEVVARLFSIQFDTRKSSSLFSQGILLLGAF 155

Query: 393 SSVPTLSESSKRACVELICKLMEEQRDFIVSRGESVLPEVLAGIGYALSSSQLVYFGRLL 572
           S VP  SE SK  C+EL+C+L+EE+   I S  E ++P++L GIGYALSSS   +F ++L
Sbjct: 156 SVVPVASEHSKTVCLELLCRLLEEEYQLIGS-SEELIPDILGGIGYALSSSGNAHFAQIL 214

Query: 573 NSLFGIWSKEGGVCGVLSHGLMVL 644
           NSL GIW KEGG  G +SHGL++L
Sbjct: 215 NSLLGIWGKEGGPHGNVSHGLIIL 238


>ref|XP_002281705.1| PREDICTED: uncharacterized protein LOC100256489 [Vitis vinifera]
          Length = 819

 Score =  147 bits (370), Expect = 2e-33
 Identities = 89/204 (43%), Positives = 115/204 (56%), Gaps = 6/204 (2%)
 Frame = +3

Query: 51  RAIIQAWAELRDSLHHQSFN---FQSLQTLINSQTSLHVADPQAKXXXXXXXXXXXXXXX 221
           RAIIQAW ELRDSL +QSF+   FQSL+TL +SQ+SL+VADPQA+               
Sbjct: 37  RAIIQAWTELRDSLQYQSFHPNHFQSLRTLFDSQSSLYVADPQARLLLSILSSSNLSLPH 96

Query: 222 XXXXXXFFKLLYIWLRKSSKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI--- 392
                 F +LLYIW+RKS+KP                                   +   
Sbjct: 97  ESYPF-FLRLLYIWVRKSTKPSSVLVDSAVEVVARLFSIQFDTRKSSSLFSQGILLLGAF 155

Query: 393 SSVPTLSESSKRACVELICKLMEEQRDFIVSRGESVLPEVLAGIGYALSSSQLVYFGRLL 572
           S VP  SE SK  C+EL+C+L+EE+   I S  E ++P++L GIGYALSSS   +F ++L
Sbjct: 156 SVVPVASEHSKTVCLELLCRLLEEEYQLIGS-SEELIPDILGGIGYALSSSGNAHFAQIL 214

Query: 573 NSLFGIWSKEGGVCGVLSHGLMVL 644
           NSL GIW KEGG  G +SHGL++L
Sbjct: 215 NSLLGIWGKEGGPHGNVSHGLIIL 238


>ref|XP_002310984.1| predicted protein [Populus trichocarpa] gi|222850804|gb|EEE88351.1|
           predicted protein [Populus trichocarpa]
          Length = 608

 Score =  143 bits (360), Expect = 3e-32
 Identities = 86/204 (42%), Positives = 115/204 (56%), Gaps = 6/204 (2%)
 Frame = +3

Query: 51  RAIIQAWAELRDSLHHQSF---NFQSLQTLINSQTSLHVADPQAKXXXXXXXXXXXXXXX 221
           RAIIQAWAELRD   HQSF   +FQSL+ L++++TSLHVA+PQAK               
Sbjct: 35  RAIIQAWAELRDCHQHQSFEPHHFQSLKILLDARTSLHVAEPQAKLLVSILSSTNLVIPL 94

Query: 222 XXXXXXFFKLLYIWLRKSSKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI--- 392
                   +LLYIW+RKS +P                                   +   
Sbjct: 95  EAYPL-LLRLLYIWVRKSFRPSSALIDSAVETLSHLLATGLGSKKSPEFFSEGVLLLGAF 153

Query: 393 SSVPTLSESSKRACVELICKLMEEQRDFIVSRGESVLPEVLAGIGYALSSSQLVYFGRLL 572
           SSVP++SESSK  C+EL+C+L+E++   +   G  ++P+VLAGIGYAL SS +VY+ R L
Sbjct: 154 SSVPSVSESSKTVCLELLCRLLEDEYRLVSPFG-GLIPDVLAGIGYALCSSVIVYYARTL 212

Query: 573 NSLFGIWSKEGGVCGVLSHGLMVL 644
           N+L GIW +E G  G +SHGLM+L
Sbjct: 213 NALLGIWGREDGPPGSVSHGLMIL 236


>ref|XP_002514464.1| conserved hypothetical protein [Ricinus communis]
           gi|223546460|gb|EEF47960.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 829

 Score =  134 bits (337), Expect = 1e-29
 Identities = 82/204 (40%), Positives = 111/204 (54%), Gaps = 6/204 (2%)
 Frame = +3

Query: 51  RAIIQAWAELRDSLHHQSF---NFQSLQTLINSQTSLHVADPQAKXXXXXXXXXXXXXXX 221
           RAIIQAWAELRDS  HQSF   + Q+L+ L+  +TSLHVA+PQAK               
Sbjct: 42  RAIIQAWAELRDSFQHQSFQPNHLQALKILLQYKTSLHVAEPQAKLLISILSSQNIFLPL 101

Query: 222 XXXXXXFFKLLYIWLRKSSKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISS- 398
                  F+LLYIW+RKS +P                                   + + 
Sbjct: 102 ESYPL-LFRLLYIWVRKSFRPSLALVDSAVEVLSKRLHNNFDAKRNPELFAEAVLLLGAF 160

Query: 399 --VPTLSESSKRACVELICKLMEEQRDFIVSRGESVLPEVLAGIGYALSSSQLVYFGRLL 572
             VP+ +E+SK  C+EL+C+L++E    +VS  + ++P VLAGIGYAL SS   Y+ R+L
Sbjct: 161 AFVPSATETSKTVCLELLCRLLDEYYK-LVSSVDGLIPNVLAGIGYALCSSVNAYYVRIL 219

Query: 573 NSLFGIWSKEGGVCGVLSHGLMVL 644
           ++ FGIW KE G  G +SHGLM+L
Sbjct: 220 DAFFGIWGKEDGPHGNVSHGLMIL 243


>ref|XP_004147986.1| PREDICTED: uncharacterized protein LOC101212894 [Cucumis sativus]
           gi|449524346|ref|XP_004169184.1| PREDICTED:
           uncharacterized protein LOC101230084 [Cucumis sativus]
          Length = 826

 Score =  128 bits (322), Expect = 8e-28
 Identities = 85/204 (41%), Positives = 108/204 (52%), Gaps = 6/204 (2%)
 Frame = +3

Query: 51  RAIIQAWAELRDSLHHQSF---NFQSLQTLINSQTSLHVADPQAKXXXXXXXXXXXXXXX 221
           R IIQAWAELR SL HQ F   + QSL+ L+NSQ+SL+VADPQAK               
Sbjct: 31  REIIQAWAELRSSLEHQFFDDRHIQSLKILVNSQSSLYVADPQAK-LVISLLSSPNFSIS 89

Query: 222 XXXXXXFFKLLYIWLRKSSKP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 392
                 F ++LYIWLRKS +P                                      I
Sbjct: 90  DESYPLFLRILYIWLRKSLRPSLVLVDSSVEVLSQIFSSKIELRKNPLFISEGVLVLGAI 149

Query: 393 SSVPTLSESSKRACVELICKLMEEQRDFIVSRGESVLPEVLAGIGYALSSSQLVYFGRLL 572
           S +P+ SE SK  C+EL+C+++EE  D+++  G  ++PE LAGIGYA SSS   +  RLL
Sbjct: 150 SYLPSASEKSKLCCLELLCRVLEE--DYLLVGG--IVPEFLAGIGYAFSSSVNAHVVRLL 205

Query: 573 NSLFGIWSKEGGVCGVLSHGLMVL 644
           +SL GIWSK  G    LS GLM+L
Sbjct: 206 DSLLGIWSKVNGPIDTLSSGLMIL 229


Top