BLASTX nr result

ID: Coptis25_contig00026591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026591
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551747.1| PREDICTED: ABC transporter C family member 3...    89   4e-16
ref|XP_002533032.1| multidrug resistance-associated protein 2, 6...    86   3e-15
ref|XP_002533033.1| multidrug resistance-associated protein 2, 6...    84   1e-14
ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...    82   5e-14
emb|CBI26749.3| unnamed protein product [Vitis vinifera]               82   5e-14

>ref|XP_003551747.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1306

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 8/101 (7%)
 Frame = +1

Query: 1   LAAGTDFMELVGAHKQAFSGQMDSTTERGVVGAENVRSIDQENGALE----ENEKQNIDD 168
           L + TDFMELVGAH++A S  M S  ER +   E V    +++ +L     E E++NIDD
Sbjct: 641 LRSDTDFMELVGAHREALSSVMSS--ER-IPTLETVNISTKDSDSLRYFELEQEEKNIDD 697

Query: 169 ----TDETLEISAQLVQEEEREKGRVGYKVYWKYLTTLYGG 279
               +D+T++   QL+QEEEREKGRV +KVYWKY+TT YGG
Sbjct: 698 HHDKSDDTVKPKGQLIQEEEREKGRVRFKVYWKYITTAYGG 738


>ref|XP_002533032.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223527170|gb|EEF29340.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1233

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/97 (50%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   LAAGTDFMELVGAHKQAFSGQMDSTTERGVVGAENVR--SIDQENGA--LEENEKQNIDD 168
           L +G+DFMELV AH+ A S  +DS       G E++   ++   NG    EEN+      
Sbjct: 654 LNSGSDFMELVSAHESALS-PLDSNQAGSASGNESISKDNMSSTNGVPLKEENKDSQNGK 712

Query: 169 TDETLEISAQLVQEEEREKGRVGYKVYWKYLTTLYGG 279
            DE +E   QLVQEEEREKGRVG+ VYWKYLTT YGG
Sbjct: 713 MDEIVEPKGQLVQEEEREKGRVGFPVYWKYLTTAYGG 749


>ref|XP_002533033.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223527171|gb|EEF29341.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1453

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/99 (48%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
 Frame = +1

Query: 1    LAAGTDFMELVGAHKQAFSGQMDSTTERGVVGAENVR------SIDQENGALEENEKQNI 162
            L +G+DFMELVGAHK A +  +DS     V G E++       S   E+    EN+K   
Sbjct: 779  LNSGSDFMELVGAHKTALAA-LDSNQAGPVSGNESISKDNDGMSSTSEDPLKGENKKLQH 837

Query: 163  DDTDETLEISAQLVQEEEREKGRVGYKVYWKYLTTLYGG 279
               DE +E   QLVQEEEREKG VG+ +YWKYLT  YGG
Sbjct: 838  GKADEIIEPKKQLVQEEEREKGSVGFPIYWKYLTAAYGG 876


>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
 Frame = +1

Query: 10   GTDFMELVGAHKQAFSGQMDSTTERGVVGAENVRSID----QENGALEENEKQNIDDTDE 177
            G+DF+ELVGAHK+A S       E+  + +EN  S+D     E    EEN      + + 
Sbjct: 829  GSDFVELVGAHKKALSALESIEAEKSSIMSEN--SVDTGSTSEVVPKEENRNGQTGNIEG 886

Query: 178  TLEISAQLVQEEEREKGRVGYKVYWKYLTTLYGG 279
            T    AQLVQEEEREKG+VG+ VYWKY+TT YGG
Sbjct: 887  TDGPKAQLVQEEEREKGKVGFSVYWKYITTAYGG 920


>emb|CBI26749.3| unnamed protein product [Vitis vinifera]
          Length = 1269

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/90 (48%), Positives = 57/90 (63%)
 Frame = +1

Query: 10  GTDFMELVGAHKQAFSGQMDSTTERGVVGAENVRSIDQENGALEENEKQNIDDTDETLEI 189
           G+DF+ELVGAHK+A S       E+  + +EN  + + + G        NI+ TD     
Sbjct: 626 GSDFVELVGAHKKALSALESIEAEKSSIMSENKENRNGQTG--------NIEGTDGP--- 674

Query: 190 SAQLVQEEEREKGRVGYKVYWKYLTTLYGG 279
            AQLVQEEEREKG+VG+ VYWKY+TT YGG
Sbjct: 675 KAQLVQEEEREKGKVGFSVYWKYITTAYGG 704


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