BLASTX nr result

ID: Coptis25_contig00026583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026583
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20169.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250...   140   8e-32
ref|XP_002331717.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_003540498.1| PREDICTED: uncharacterized protein LOC100812...   132   2e-29
ref|XP_003596313.1| DNA polymerase delta subunit [Medicago trunc...   132   2e-29

>emb|CBI20169.3| unnamed protein product [Vitis vinifera]
          Length = 477

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/98 (69%), Positives = 85/98 (86%)
 Frame = -1

Query: 295 MAEIGTLNILGEIQYLVSDQLQVVSYKWLSRNFSVSSNEAKRILMEFVEQNGSGLEIVYT 116
           MA+I TL IL EI+ LVSD+LQVVSYKWLSR+F V+SN AKR+L EFVE++G GLE+VYT
Sbjct: 1   MADIETLGILEEIEALVSDKLQVVSYKWLSRSFLVTSNVAKRLLHEFVEKHGGGLEVVYT 60

Query: 115 VSGWLKDSDPVYHVRLVSGVKLAEVKKKFEGNCSLQVY 2
           +SGWLK+  PVYH+RLVS  KLAE K++F+G+CS+QVY
Sbjct: 61  LSGWLKNDPPVYHIRLVSEPKLAEAKQEFDGHCSVQVY 98


>ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250468 [Vitis vinifera]
          Length = 524

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/98 (69%), Positives = 85/98 (86%)
 Frame = -1

Query: 295 MAEIGTLNILGEIQYLVSDQLQVVSYKWLSRNFSVSSNEAKRILMEFVEQNGSGLEIVYT 116
           MA+I TL IL EI+ LVSD+LQVVSYKWLSR+F V+SN AKR+L EFVE++G GLE+VYT
Sbjct: 1   MADIETLGILEEIEALVSDKLQVVSYKWLSRSFLVTSNVAKRLLHEFVEKHGGGLEVVYT 60

Query: 115 VSGWLKDSDPVYHVRLVSGVKLAEVKKKFEGNCSLQVY 2
           +SGWLK+  PVYH+RLVS  KLAE K++F+G+CS+QVY
Sbjct: 61  LSGWLKNDPPVYHIRLVSEPKLAEAKQEFDGHCSVQVY 98


>ref|XP_002331717.1| predicted protein [Populus trichocarpa] gi|222874323|gb|EEF11454.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  135 bits (340), Expect = 3e-30
 Identities = 65/93 (69%), Positives = 76/93 (81%)
 Frame = -1

Query: 280 TLNILGEIQYLVSDQLQVVSYKWLSRNFSVSSNEAKRILMEFVEQNGSGLEIVYTVSGWL 101
           TL IL EI+ LVSD+LQVVSYKWLSRNF VSSN AKR+L EFV   GSG E+VYT+SGWL
Sbjct: 3   TLGILDEIEVLVSDKLQVVSYKWLSRNFMVSSNAAKRLLQEFVNTRGSGFEVVYTLSGWL 62

Query: 100 KDSDPVYHVRLVSGVKLAEVKKKFEGNCSLQVY 2
           K++   YH+RLVSG KL E K++F GNCS+QVY
Sbjct: 63  KNNPSSYHIRLVSGPKLEEAKQEFNGNCSVQVY 95


>ref|XP_003540498.1| PREDICTED: uncharacterized protein LOC100812372 [Glycine max]
          Length = 518

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/98 (62%), Positives = 83/98 (84%)
 Frame = -1

Query: 295 MAEIGTLNILGEIQYLVSDQLQVVSYKWLSRNFSVSSNEAKRILMEFVEQNGSGLEIVYT 116
           MA+  TL+ + EI+ LVSD+LQVVSYKWLSRN+ VSS+EAKR+L EFV+++  GLE+VY 
Sbjct: 1   MAQTQTLSFIHEIESLVSDKLQVVSYKWLSRNYMVSSDEAKRLLQEFVQKHEGGLEVVYA 60

Query: 115 VSGWLKDSDPVYHVRLVSGVKLAEVKKKFEGNCSLQVY 2
           +SGWLK + P YHVRLV+G KLAE +++F+G+CS+Q+Y
Sbjct: 61  LSGWLKSNHPSYHVRLVTGPKLAEAQQEFDGDCSVQIY 98


>ref|XP_003596313.1| DNA polymerase delta subunit [Medicago truncatula]
           gi|355485361|gb|AES66564.1| DNA polymerase delta subunit
           [Medicago truncatula]
          Length = 527

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/98 (63%), Positives = 81/98 (82%)
 Frame = -1

Query: 295 MAEIGTLNILGEIQYLVSDQLQVVSYKWLSRNFSVSSNEAKRILMEFVEQNGSGLEIVYT 116
           M+   TL+++ EI+ LVSDQLQVVSYKWLSR++ +SSNEAKR+L EFVE++  GLE+VY 
Sbjct: 1   MSNTETLSLIHEIESLVSDQLQVVSYKWLSRSYQISSNEAKRLLREFVEKHEDGLEVVYA 60

Query: 115 VSGWLKDSDPVYHVRLVSGVKLAEVKKKFEGNCSLQVY 2
           +SGWLK S P YHVRLV+G  LAE +++F+G CS+QVY
Sbjct: 61  LSGWLKSSIPSYHVRLVTGTMLAEAQEEFDGKCSVQVY 98


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