BLASTX nr result

ID: Coptis25_contig00026558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026558
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001754191.1| predicted protein [Physcomitrella patens sub...   160   8e-38
ref|XP_001752421.1| predicted protein [Physcomitrella patens sub...   160   1e-37
ref|XP_001769084.1| predicted protein [Physcomitrella patens sub...   159   2e-37
gb|ABR16267.1| unknown [Picea sitchensis]                             158   4e-37
ref|XP_002526219.1| 26S protease regulatory subunit, putative [R...   157   8e-37

>ref|XP_001754191.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162694745|gb|EDQ81092.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 446

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/91 (84%), Positives = 87/91 (95%)
 Frame = +3

Query: 168 TRVGKKQRKQKGSESASRLPHVTPVTKCKLRLLKLQRIKDYLLMEEEFVFNQERRKPQED 347
           TRVG+KQRKQKGSE+A+RLP VTP TKCKLRLLKL+R+KDYLLMEEEFV NQER KPQED
Sbjct: 37  TRVGRKQRKQKGSEAAARLPVVTPATKCKLRLLKLERVKDYLLMEEEFVTNQERLKPQED 96

Query: 348 KNEEERSKVDEIRGSPLSVGNLEEMIDENHA 440
           KNEE+RSKVD++RGSP+SVGNLEE+IDENHA
Sbjct: 97  KNEEDRSKVDDLRGSPMSVGNLEEIIDENHA 127


>ref|XP_001752421.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162696321|gb|EDQ82660.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 446

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/91 (84%), Positives = 86/91 (94%)
 Frame = +3

Query: 168 TRVGKKQRKQKGSESASRLPHVTPVTKCKLRLLKLQRIKDYLLMEEEFVFNQERRKPQED 347
           TRVG+KQRKQKGSE+A+RLP VTP TKCKLRLLKL R+KDYLLMEEEFV NQER KPQED
Sbjct: 37  TRVGRKQRKQKGSEAAARLPVVTPATKCKLRLLKLDRVKDYLLMEEEFVTNQERLKPQED 96

Query: 348 KNEEERSKVDEIRGSPLSVGNLEEMIDENHA 440
           KNEE+RSKVD++RGSP+SVGNLEE+IDENHA
Sbjct: 97  KNEEDRSKVDDLRGSPMSVGNLEEIIDENHA 127


>ref|XP_001769084.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679718|gb|EDQ66162.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 446

 Score =  159 bits (402), Expect = 2e-37
 Identities = 76/91 (83%), Positives = 87/91 (95%)
 Frame = +3

Query: 168 TRVGKKQRKQKGSESASRLPHVTPVTKCKLRLLKLQRIKDYLLMEEEFVFNQERRKPQED 347
           +RVG+KQRKQKGSE+A+RLP VTP TKCKLRLLKL+R+KDYLLMEEEFV NQER KPQED
Sbjct: 37  SRVGRKQRKQKGSEAAARLPVVTPATKCKLRLLKLERVKDYLLMEEEFVTNQERLKPQED 96

Query: 348 KNEEERSKVDEIRGSPLSVGNLEEMIDENHA 440
           KNEE+RSKVD++RGSP+SVGNLEE+IDENHA
Sbjct: 97  KNEEDRSKVDDLRGSPMSVGNLEEIIDENHA 127


>gb|ABR16267.1| unknown [Picea sitchensis]
          Length = 444

 Score =  158 bits (400), Expect = 4e-37
 Identities = 76/91 (83%), Positives = 87/91 (95%)
 Frame = +3

Query: 168 TRVGKKQRKQKGSESASRLPHVTPVTKCKLRLLKLQRIKDYLLMEEEFVFNQERRKPQED 347
           TRVG++QRKQKG E+A+RLP VTP+TKCKLRLLKL+RIKDYLLMEEEFV NQER KPQED
Sbjct: 35  TRVGRRQRKQKGPEAAARLPVVTPLTKCKLRLLKLERIKDYLLMEEEFVSNQERLKPQED 94

Query: 348 KNEEERSKVDEIRGSPLSVGNLEEMIDENHA 440
           KNEE+RSKVD++RGSP+SVGNLEE+IDENHA
Sbjct: 95  KNEEDRSKVDDLRGSPMSVGNLEEIIDENHA 125


>ref|XP_002526219.1| 26S protease regulatory subunit, putative [Ricinus communis]
           gi|223534458|gb|EEF36160.1| 26S protease regulatory
           subunit, putative [Ricinus communis]
          Length = 443

 Score =  157 bits (397), Expect = 8e-37
 Identities = 75/91 (82%), Positives = 87/91 (95%)
 Frame = +3

Query: 168 TRVGKKQRKQKGSESASRLPHVTPVTKCKLRLLKLQRIKDYLLMEEEFVFNQERRKPQED 347
           +RVG+KQRKQKG E+A+RLP VTP+TKCKLRLLKL+RIKDYLLMEEEFV NQER KPQE+
Sbjct: 34  SRVGRKQRKQKGPEAAARLPTVTPLTKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEE 93

Query: 348 KNEEERSKVDEIRGSPLSVGNLEEMIDENHA 440
           KNEE+RSKVD++RGSP+SVGNLEE+IDENHA
Sbjct: 94  KNEEDRSKVDDLRGSPMSVGNLEELIDENHA 124


Top