BLASTX nr result
ID: Coptis25_contig00026556
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00026556
(1297 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI25024.3| unnamed protein product [Vitis vinifera] 379 e-103
ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containi... 379 e-103
ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containi... 379 e-102
ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containi... 365 2e-98
gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Ja... 364 3e-98
>emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 379 bits (974), Expect = e-103
Identities = 178/261 (68%), Positives = 213/261 (81%)
Frame = +1
Query: 1 SHMGLVDTGKIYFNWLVRDPDVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSM 180
SH+GLV+ G+ YF+ ++R +V PNV HYSCMVD+LGRAG + EA I+ MP +AT SM
Sbjct: 361 SHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASM 420
Query: 181 WGSLLGSCKIHGNLELGEIAAKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKD 360
WGSLL SC+I+ NLEL E+AAKHLF +EP N GNHVLLSNIYAAN W +VAR+R LLK+
Sbjct: 421 WGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKE 480
Query: 361 SGVRKEMGKSWIEVKDKVHTFVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHD 540
S +KE GKSWIE+K KVH+F+VGER HPRI +IY KL+ LV EMKK+ YKA T+HDLHD
Sbjct: 481 SKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHD 540
Query: 541 VEVAQKEELLRHHSEKLALAFGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAII 720
VE ++K+ELLRHHSEKLAL FG++ LP G PIRI KNLRICGDCHSF+KL S IT R II
Sbjct: 541 VEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREII 600
Query: 721 VRDTNRFHHFRDGSCSCRDFW 783
VRDTNRFHHF++G CSC +FW
Sbjct: 601 VRDTNRFHHFKNGYCSCGEFW 621
>ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like
[Vitis vinifera]
Length = 594
Score = 379 bits (974), Expect = e-103
Identities = 178/261 (68%), Positives = 213/261 (81%)
Frame = +1
Query: 1 SHMGLVDTGKIYFNWLVRDPDVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSM 180
SH+GLV+ G+ YF+ ++R +V PNV HYSCMVD+LGRAG + EA I+ MP +AT SM
Sbjct: 334 SHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASM 393
Query: 181 WGSLLGSCKIHGNLELGEIAAKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKD 360
WGSLL SC+I+ NLEL E+AAKHLF +EP N GNHVLLSNIYAAN W +VAR+R LLK+
Sbjct: 394 WGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKE 453
Query: 361 SGVRKEMGKSWIEVKDKVHTFVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHD 540
S +KE GKSWIE+K KVH+F+VGER HPRI +IY KL+ LV EMKK+ YKA T+HDLHD
Sbjct: 454 SKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHD 513
Query: 541 VEVAQKEELLRHHSEKLALAFGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAII 720
VE ++K+ELLRHHSEKLAL FG++ LP G PIRI KNLRICGDCHSF+KL S IT R II
Sbjct: 514 VEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREII 573
Query: 721 VRDTNRFHHFRDGSCSCRDFW 783
VRDTNRFHHF++G CSC +FW
Sbjct: 574 VRDTNRFHHFKNGYCSCGEFW 594
>ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like
[Glycine max]
Length = 618
Score = 379 bits (972), Expect = e-102
Identities = 176/261 (67%), Positives = 217/261 (83%)
Frame = +1
Query: 1 SHMGLVDTGKIYFNWLVRDPDVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSM 180
SHMGL + G+ YF+ +VR ++ P+V HYSCM+D+LGRAG + +A+ LIE MP AT SM
Sbjct: 358 SHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSM 417
Query: 181 WGSLLGSCKIHGNLELGEIAAKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKD 360
WGSLL SCKI+GN+E EIAAK+LF MEP+N GNH+LL+NIYAANK W +VAR+RKLL++
Sbjct: 418 WGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRE 477
Query: 361 SGVRKEMGKSWIEVKDKVHTFVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHD 540
+ VRKE G SWIE+K+K+H+F VGER HP+I DIYAKLD LV E+KKL+YK DT +DLHD
Sbjct: 478 TDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHD 537
Query: 541 VEVAQKEELLRHHSEKLALAFGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAII 720
VE +K+ LLRHHSEKLA+ FGL+ LP +PIRI KNLRICGDCH+F+KLVSK T+R II
Sbjct: 538 VEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREII 597
Query: 721 VRDTNRFHHFRDGSCSCRDFW 783
VRDTNRFHHF+DG CSC +FW
Sbjct: 598 VRDTNRFHHFKDGFCSCGEFW 618
>ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like
[Brachypodium distachyon]
Length = 631
Score = 365 bits (936), Expect = 2e-98
Identities = 172/261 (65%), Positives = 206/261 (78%)
Frame = +1
Query: 1 SHMGLVDTGKIYFNWLVRDPDVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSM 180
SH GLV+ G+ YF+ L+ D V PNV HYSCMVD+LGR+GK +EA L+ MP E T SM
Sbjct: 371 SHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASM 430
Query: 181 WGSLLGSCKIHGNLELGEIAAKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKD 360
WGSLLGSC+ + N+ L IAA+ LF +EPDNGGNHVLLSN+YAA+ W +V +RK LKD
Sbjct: 431 WGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKD 490
Query: 361 SGVRKEMGKSWIEVKDKVHTFVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHD 540
SG +KEMG+SWIE K KVH FVVGER+HPRITDIY KL+++ EM+K + + DLHD
Sbjct: 491 SGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHD 550
Query: 541 VEVAQKEELLRHHSEKLALAFGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAII 720
V QKEELL+HHSEKLAL+FGLISLPS +PI I KNLRICGDCHSF+K+ + IT R +I
Sbjct: 551 VHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVI 610
Query: 721 VRDTNRFHHFRDGSCSCRDFW 783
VRDTNRFHHF+DGSCSC DFW
Sbjct: 611 VRDTNRFHHFKDGSCSCGDFW 631
>gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein
OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein
OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 364 bits (934), Expect = 3e-98
Identities = 170/261 (65%), Positives = 206/261 (78%)
Frame = +1
Query: 1 SHMGLVDTGKIYFNWLVRDPDVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSM 180
SH GLV+ G+ YFN L+ D PNV HYSCMVD+LGR+GK +EA L++ MP E T SM
Sbjct: 370 SHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASM 429
Query: 181 WGSLLGSCKIHGNLELGEIAAKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKD 360
WGSLLGS +IH N+ L IAA+ LF +EP+NGGNHVLLSN+YAA+ W +V +RK L+D
Sbjct: 430 WGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRD 489
Query: 361 SGVRKEMGKSWIEVKDKVHTFVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHD 540
SG +KEMG+SWIE K K+H FV GEREHP ITD+Y KL+++ EM+K+ ++A+T DLHD
Sbjct: 490 SGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEMRKISHRANTQCDLHD 549
Query: 541 VEVAQKEELLRHHSEKLALAFGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAII 720
V QKEELL+HHSEKLA AFGLISLP +PI I KNLRICGDCHSF+K+VS IT R +I
Sbjct: 550 VHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCHSFMKIVSCITERQVI 609
Query: 721 VRDTNRFHHFRDGSCSCRDFW 783
VRD NRFHHF+DGSCSC DFW
Sbjct: 610 VRDINRFHHFKDGSCSCGDFW 630