BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026546
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15151.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...   140   8e-32
ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...   131   7e-29
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...   131   7e-29
ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinu...   130   1e-28

>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
          Length = 954

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/106 (63%), Positives = 89/106 (83%)
 Frame = +2

Query: 149 MAEDRELKTWVSDKLMSLLGYSQPTLVQFVIRLAKEGASPANVAEKLVESGLPSSTETRS 328
           M  +  LK WVSDKLMSLLGYSQPTLVQ+V+ LAK+ +SPA+V  KLVE GL +S+ETRS
Sbjct: 1   MGSESNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETRS 60

Query: 329 FAKEVFTRVPRKSADLSSYQREEREAAMLVKKQRTYQMLEASDDEE 466
           FA+E+F++VP K++ L+ YQ++EREAAMLV+KQ+TY +L+A D +E
Sbjct: 61  FAEEIFSKVPHKASGLNVYQKQEREAAMLVRKQKTYAILDADDSDE 106


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/106 (63%), Positives = 89/106 (83%)
 Frame = +2

Query: 149 MAEDRELKTWVSDKLMSLLGYSQPTLVQFVIRLAKEGASPANVAEKLVESGLPSSTETRS 328
           M  +  LK WVSDKLMSLLGYSQPTLVQ+V+ LAK+ +SPA+V  KLVE GL +S+ETRS
Sbjct: 1   MGSESNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETRS 60

Query: 329 FAKEVFTRVPRKSADLSSYQREEREAAMLVKKQRTYQMLEASDDEE 466
           FA+E+F++VP K++ L+ YQ++EREAAMLV+KQ+TY +L+A D +E
Sbjct: 61  FAEEIFSKVPHKASGLNVYQKQEREAAMLVRKQKTYAILDADDSDE 106


>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score =  131 bits (329), Expect = 7e-29
 Identities = 62/106 (58%), Positives = 87/106 (82%)
 Frame = +2

Query: 149 MAEDRELKTWVSDKLMSLLGYSQPTLVQFVIRLAKEGASPANVAEKLVESGLPSSTETRS 328
           M  D  LKTWVSDKLMSLLGYSQPT+VQ++I L+K+  SPA++  KLVE G+ SS +T +
Sbjct: 1   MGSDDNLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFGI-SSMDTHA 59

Query: 329 FAKEVFTRVPRKSADLSSYQREEREAAMLVKKQRTYQMLEASDDEE 466
           FA+E+++RVPR+S+ ++ YQ++EREAAML +KQ+TY +L+A DD +
Sbjct: 60  FAEEIYSRVPRRSSGINQYQKQEREAAMLARKQKTYSILKADDDSD 105


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score =  131 bits (329), Expect = 7e-29
 Identities = 62/106 (58%), Positives = 87/106 (82%)
 Frame = +2

Query: 149 MAEDRELKTWVSDKLMSLLGYSQPTLVQFVIRLAKEGASPANVAEKLVESGLPSSTETRS 328
           M  D  LKTWVSDKLMSLLGYSQPT+VQ++I L+K+  SPA++  KLVE G+ SS +T +
Sbjct: 1   MGSDDNLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFGI-SSMDTHA 59

Query: 329 FAKEVFTRVPRKSADLSSYQREEREAAMLVKKQRTYQMLEASDDEE 466
           FA+E+++RVPR+S+ ++ YQ++EREAAML +KQ+TY +L+A DD +
Sbjct: 60  FAEEIYSRVPRRSSGINQYQKQEREAAMLARKQKTYSILKADDDSD 105


>ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538063|gb|EEF39675.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 756

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/103 (59%), Positives = 84/103 (81%)
 Frame = +2

Query: 158 DRELKTWVSDKLMSLLGYSQPTLVQFVIRLAKEGASPANVAEKLVESGLPSSTETRSFAK 337
           D +LKTWVSDKLMS+LGYSQ T+VQ++I ++K+  SPA+V  KL E G  +S ETRSF++
Sbjct: 3   DSDLKTWVSDKLMSILGYSQSTVVQYIIGISKQANSPADVQAKLSEFGFSTSAETRSFSE 62

Query: 338 EVFTRVPRKSADLSSYQREEREAAMLVKKQRTYQMLEASDDEE 466
           E+F+RVPRK + L+ YQ++EREAAML +KQ TY +L+A DD++
Sbjct: 63  ELFSRVPRKQSGLNIYQKQEREAAMLARKQLTYTLLDADDDDD 105