BLASTX nr result

ID: Coptis25_contig00026545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026545
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37492.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002263495.2| PREDICTED: uncharacterized protein LOC100260...    62   6e-08
emb|CBI37490.3| unnamed protein product [Vitis vinifera]               62   6e-08
emb|CBI37493.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002264606.1| PREDICTED: uncharacterized transporter C5D6....    57   2e-06

>emb|CBI37492.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
 Frame = -3

Query: 328 LKIGAIYLWSYVYKIVRISSTKKMLEVELNGSINGV--PEEPLNISRNSCSDAPIPSNDC 155
           L IGAI +WSYVY I+RIS+ K   E+ L+ S   +    E L I    C++A +PS DC
Sbjct: 152 LAIGAIGIWSYVYTIMRISANKCKKEINLDDSTISIRTSGETLEILSEGCTEALLPSKDC 211

Query: 154 LMSRDEVDRFALPYSLDDKNVVGSHSVKFNQQLKMLAGKINLKR 23
             SR+  D   L ++  +         K  QQ+++L  KI+LK+
Sbjct: 212 PSSRECSDEVELAHAGSEGKQKVPFLEKIKQQVEILMEKIDLKK 255


>ref|XP_002263495.2| PREDICTED: uncharacterized protein LOC100260227 [Vitis vinifera]
          Length = 387

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/101 (34%), Positives = 54/101 (53%)
 Frame = -3

Query: 328 LKIGAIYLWSYVYKIVRISSTKKMLEVELNGSINGVPEEPLNISRNSCSDAPIPSNDCLM 149
           + IGAIYLWSYVY IVR+SS      + +         EPL           + S DC +
Sbjct: 128 MAIGAIYLWSYVYNIVRVSSVGTTEVINIEDDSPAKMREPL-----------LDSKDCSI 176

Query: 148 SRDEVDRFALPYSLDDKNVVGSHSVKFNQQLKMLAGKINLK 26
           S D  D+  LPY+  ++N+  + + K  + L+ML+ +IN++
Sbjct: 177 SVDYADQLTLPYTQSEENLKVTTADKVKRFLRMLSREINIQ 217


>emb|CBI37490.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/101 (34%), Positives = 54/101 (53%)
 Frame = -3

Query: 328 LKIGAIYLWSYVYKIVRISSTKKMLEVELNGSINGVPEEPLNISRNSCSDAPIPSNDCLM 149
           + IGAIYLWSYVY IVR+SS      + +         EPL           + S DC +
Sbjct: 193 MAIGAIYLWSYVYNIVRVSSVGTTEVINIEDDSPAKMREPL-----------LDSKDCSI 241

Query: 148 SRDEVDRFALPYSLDDKNVVGSHSVKFNQQLKMLAGKINLK 26
           S D  D+  LPY+  ++N+  + + K  + L+ML+ +IN++
Sbjct: 242 SVDYADQLTLPYTQSEENLKVTTADKVKRFLRMLSREINIQ 282


>emb|CBI37493.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
 Frame = -3

Query: 322 IGAIYLWSYVYKIVRISSTKKMLEVELNGSINGV--PEEPLNISRNSCSDAPIPSNDCLM 149
           +GAI +W+YVY I+R+S+TK   E+ L  S   V    E L IS + C++A +P  D   
Sbjct: 115 LGAIGVWTYVYMIMRMSATKCKGEINLCNSTTSVRTSREALEISSDCCTEALLPPRDSPR 174

Query: 148 SRDEVDRFALPYSLDDKNVVGSHSVKFNQQLKMLAGKINLKR 23
           S +  D   LP+   ++      S K  Q++K+   K N K+
Sbjct: 175 SGNWSDEEELPHDGSEEKSEVPFSEKIKQKVKIFMEKTNFKQ 216


>ref|XP_002264606.1| PREDICTED: uncharacterized transporter C5D6.04 isoform 1 [Vitis
           vinifera] gi|359476983|ref|XP_003631924.1| PREDICTED:
           uncharacterized transporter C5D6.04 isoform 2 [Vitis
           vinifera]
          Length = 418

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
 Frame = -3

Query: 322 IGAIYLWSYVYKIVRISSTKKMLEVELNGSINGV--PEEPLNISRNSCSDAPIPSNDCLM 149
           +GAI +W+YVY I+R+S+TK   E+ L  S   V    E L IS + C++A +P  D   
Sbjct: 154 LGAIGVWTYVYMIMRMSATKCKGEINLCNSTTSVRTSREALEISSDCCTEALLPPRDSPR 213

Query: 148 SRDEVDRFALPYSLDDKNVVGSHSVKFNQQLKMLAGKINLKR 23
           S +  D   LP+   ++      S K  Q++K+   K N K+
Sbjct: 214 SGNWSDEEELPHDGSEEKSEVPFSEKIKQKVKIFMEKTNFKQ 255


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