BLASTX nr result

ID: Coptis25_contig00026509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026509
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precu...   481   e-133
ref|XP_002301105.1| predicted protein [Populus trichocarpa] gi|2...   480   e-133
ref|XP_003522737.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   476   e-132
ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   476   e-132
gb|AAD16897.1| glutamyl-tRNA reductase precursor [Glycine max]        474   e-131

>ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus
            communis] gi|223550696|gb|EEF52182.1| Glutamyl-tRNA
            reductase 1, chloroplast precursor, putative [Ricinus
            communis]
          Length = 565

 Score =  481 bits (1239), Expect = e-133
 Identities = 253/374 (67%), Positives = 300/374 (80%), Gaps = 5/374 (1%)
 Frame = +2

Query: 2    REKLAIPEAEYPRAIRELCGFYHIEEAAVLSTCNRVEIYVVALSWHCGVRDVTEWMEKTS 181
            REKLAIPEAE+PRAI ELC   HI+EAAVLSTCNR+EIYVVALS H GV++VTEWM KTS
Sbjct: 134  REKLAIPEAEWPRAIGELCSLNHIDEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTS 193

Query: 182  GVAASELRPHLFLLRGSDAINHLFEVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRS 361
            G+  SE+  H FLL  +DA  HLFEVSAGLDSL+LG+ QIL +VKQVV  G+GV GFGR+
Sbjct: 194  GIPVSEICEHQFLLYNNDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRN 253

Query: 362  LNGLFRYALRVGADVLTKTNIASGPIISVSSAAVELAIIKLPQNLSSTARVLVIGAGKMG 541
            ++GLF++A+ VG  V T+TNIA+G + SVSSAAVELA++KLP++  +TAR+LVIGAGKMG
Sbjct: 254  ISGLFKHAISVGKRVRTETNIAAGAV-SVSSAAVELALMKLPESSHATARMLVIGAGKMG 312

Query: 542  KLVINHLVAKGWTKIVVVNRSEHRVDAIREDLSGVEIIYKPLTEMLTCAGESDVVFTSTA 721
            KLVI HLVAKG TK+VVVNRSE RV AIRE++  VEIIYKPL EMLTCA E+DVVFTSTA
Sbjct: 313  KLVIKHLVAKGCTKMVVVNRSEERVAAIREEIKDVEIIYKPLDEMLTCAAEADVVFTSTA 372

Query: 722  SNIPLFMKDNVETLPPVSTMNGGSRLFFDISVPRNVGSCVSDVENTQVYNVDDFKEVLAP 901
            S  PLF+K+NV+ LP VS+  G  RLF DISVPRNVGSCV+DVE  +VYNVDD KEV+A 
Sbjct: 373  SETPLFLKENVKDLPSVSSEVGSLRLFVDISVPRNVGSCVNDVEKARVYNVDDLKEVVAA 432

Query: 902  KME-----AMEAQAIVAKNLDDFRDKMDSFETVPTIKNLRALVETIRITELERCLSKIKH 1066
              E     AMEAQAI+ +    F    DS ETVPTIK LRA  E IR+ EL++CLSK+  
Sbjct: 433  NKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGE 492

Query: 1067 DIPKKTRRAIEDLS 1108
            +IPKKTRRA++DLS
Sbjct: 493  EIPKKTRRAVDDLS 506


>ref|XP_002301105.1| predicted protein [Populus trichocarpa] gi|222842831|gb|EEE80378.1|
            predicted protein [Populus trichocarpa]
          Length = 468

 Score =  480 bits (1236), Expect = e-133
 Identities = 254/374 (67%), Positives = 301/374 (80%), Gaps = 5/374 (1%)
 Frame = +2

Query: 2    REKLAIPEAEYPRAIRELCGFYHIEEAAVLSTCNRVEIYVVALSWHCGVRDVTEWMEKTS 181
            REKLAIPEAE+PRAI ELCG  HIEEAAVLSTCNR+EIYVVALS H GV++VTEWM KTS
Sbjct: 37   REKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTS 96

Query: 182  GVAASELRPHLFLLRGSDAINHLFEVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRS 361
            GV  SE+  H FLL  +DA  HLFEVSAGLDSL+LG+ QIL +VKQVV  G+GV GFGR+
Sbjct: 97   GVPVSEICEHRFLLYNNDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKGGQGVVGFGRN 156

Query: 362  LNGLFRYALRVGADVLTKTNIASGPIISVSSAAVELAIIKLPQNLSSTARVLVIGAGKMG 541
            ++GLF++A+ VG  V T+TNIA+G + SVSSAAVELA++KLP++  ++AR+LVIGAGKMG
Sbjct: 157  ISGLFKHAITVGKRVRTETNIAAGAV-SVSSAAVELALMKLPESSHASARMLVIGAGKMG 215

Query: 542  KLVINHLVAKGWTKIVVVNRSEHRVDAIREDLSGVEIIYKPLTEMLTCAGESDVVFTSTA 721
            KLVI HLVAKG TK+VVVNR+  RV AIRE+L  VEIIYKP  +MLTCA E+DVVFTST+
Sbjct: 216  KLVIKHLVAKGCTKMVVVNRTGDRVAAIREELKDVEIIYKPFPDMLTCAAEADVVFTSTS 275

Query: 722  SNIPLFMKDNVETLPPVSTMNGGSRLFFDISVPRNVGSCVSDVENTQVYNVDDFKEVLAP 901
            S  PLF++D+V+ LPPV +  GGSRLF DISVPRNVGSCVSD+EN +VYNVDD KEV+A 
Sbjct: 276  SETPLFVRDDVKDLPPVGSEVGGSRLFVDISVPRNVGSCVSDLENVRVYNVDDLKEVVAA 335

Query: 902  KME-----AMEAQAIVAKNLDDFRDKMDSFETVPTIKNLRALVETIRITELERCLSKIKH 1066
              E     AMEAQAI+ +    F    DS ETVPTIK LRA  E IR+ ELE+CLSK+  
Sbjct: 336  NKEDRLRKAMEAQAIINEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELEKCLSKMGD 395

Query: 1067 DIPKKTRRAIEDLS 1108
            DI KKTRRA++DLS
Sbjct: 396  DISKKTRRAVDDLS 409


>ref|XP_003522737.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Glycine
            max]
          Length = 539

 Score =  476 bits (1226), Expect = e-132
 Identities = 252/374 (67%), Positives = 295/374 (78%), Gaps = 5/374 (1%)
 Frame = +2

Query: 2    REKLAIPEAEYPRAIRELCGFYHIEEAAVLSTCNRVEIYVVALSWHCGVRDVTEWMEKTS 181
            REKLAIPEAE+PRAI ELC   HIEEAAVLSTCNR+EIYV+ALS H GV++V EWM KTS
Sbjct: 106  REKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYVLALSQHRGVKEVMEWMSKTS 165

Query: 182  GVAASELRPHLFLLRGSDAINHLFEVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRS 361
             V  SEL  H FLL  +DA  HLFEVSAGLDSL+LG+ QIL +VKQVV  G+GV GFGR+
Sbjct: 166  SVPVSELSQHRFLLYNNDATQHLFEVSAGLDSLVLGEGQILSQVKQVVKVGQGVNGFGRN 225

Query: 362  LNGLFRYALRVGADVLTKTNIASGPIISVSSAAVELAIIKLPQNLSSTARVLVIGAGKMG 541
            ++GLF++A+ VG  V T+TNIASG + SVSSAAVELA +KLP+     AR+LVIGAGKMG
Sbjct: 226  ISGLFKHAITVGKRVRTETNIASGAV-SVSSAAVELAYMKLPEASHDNARMLVIGAGKMG 284

Query: 542  KLVINHLVAKGWTKIVVVNRSEHRVDAIREDLSGVEIIYKPLTEMLTCAGESDVVFTSTA 721
            KLVI HLVAKG  K+VVVNR+E RV AIRE+L  +EIIYKPL+EMLTCAGE+D+VFTSTA
Sbjct: 285  KLVIKHLVAKGCKKMVVVNRTEERVAAIREELKDIEIIYKPLSEMLTCAGEADLVFTSTA 344

Query: 722  SNIPLFMKDNVETLPPVSTMNGGSRLFFDISVPRNVGSCVSDVENTQVYNVDDFKEVLAP 901
            S  PLF+K++V+ LPP S   GG R F DISVPRNVGSCVSD+E+ +VYNVDD KEV+A 
Sbjct: 345  SENPLFLKEHVKDLPPASQEVGGRRFFIDISVPRNVGSCVSDLESVRVYNVDDLKEVVAA 404

Query: 902  KME-----AMEAQAIVAKNLDDFRDKMDSFETVPTIKNLRALVETIRITELERCLSKIKH 1066
              E     AMEAQAI+A+    F    DS ETVPTIK LRA  E IR+ ELE+CL K+  
Sbjct: 405  NKEDRLRKAMEAQAIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELEKCLGKMGD 464

Query: 1067 DIPKKTRRAIEDLS 1108
            DIPKKTRRA++DLS
Sbjct: 465  DIPKKTRRAVDDLS 478


>ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic [Vitis vinifera]
            gi|147816412|emb|CAN77439.1| hypothetical protein
            VITISV_007402 [Vitis vinifera]
          Length = 545

 Score =  476 bits (1225), Expect = e-132
 Identities = 252/374 (67%), Positives = 296/374 (79%), Gaps = 5/374 (1%)
 Frame = +2

Query: 2    REKLAIPEAEYPRAIRELCGFYHIEEAAVLSTCNRVEIYVVALSWHCGVRDVTEWMEKTS 181
            REKLAIPEAE+PRAI ELC   HIEEAAVLSTCNR+EIYVVALS H GV++VTEWM KTS
Sbjct: 112  REKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTS 171

Query: 182  GVAASELRPHLFLLRGSDAINHLFEVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRS 361
            GV  SEL  H FLL   DA  HLFEVSAGLDSL+LG+ QIL +VKQVV  G+GV GFGR+
Sbjct: 172  GVPVSELCHHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRN 231

Query: 362  LNGLFRYALRVGADVLTKTNIASGPIISVSSAAVELAIIKLPQNLSSTARVLVIGAGKMG 541
            ++GLF++A+ VG  V T+TNIA+G + SVSSAAVELA++KLP++  +TAR+LVIGAGKMG
Sbjct: 232  ISGLFKHAITVGKRVRTETNIAAGAV-SVSSAAVELALMKLPESSHATARMLVIGAGKMG 290

Query: 542  KLVINHLVAKGWTKIVVVNRSEHRVDAIREDLSGVEIIYKPLTEMLTCAGESDVVFTSTA 721
            KLVI HLVAKG TK+V+VNR E RV AIRE++  VEIIY+PLTEML CA E+DVVFTSTA
Sbjct: 291  KLVIKHLVAKGCTKMVIVNRGEERVAAIREEMKDVEIIYRPLTEMLACAAEADVVFTSTA 350

Query: 722  SNIPLFMKDNVETLPPVSTMNGGSRLFFDISVPRNVGSCVSDVENTQVYNVDDFKEVLAP 901
            S  PLF+K++V+ LP V    GG RLF DISVPRNVG+CVSD+E  +VYNVDD KEV+A 
Sbjct: 351  SETPLFLKEHVKDLPAVGQDVGGLRLFVDISVPRNVGACVSDLETARVYNVDDLKEVVAA 410

Query: 902  KME-----AMEAQAIVAKNLDDFRDKMDSFETVPTIKNLRALVETIRITELERCLSKIKH 1066
              E     AMEAQAI+ +    F    DS ETVPTIK LRA  E IR+ ELE+CLSK+  
Sbjct: 411  NKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAYAERIRVAELEKCLSKMGD 470

Query: 1067 DIPKKTRRAIEDLS 1108
            DI KKTRRA++DLS
Sbjct: 471  DISKKTRRAVDDLS 484


>gb|AAD16897.1| glutamyl-tRNA reductase precursor [Glycine max]
          Length = 542

 Score =  474 bits (1221), Expect = e-131
 Identities = 250/374 (66%), Positives = 297/374 (79%), Gaps = 5/374 (1%)
 Frame = +2

Query: 2    REKLAIPEAEYPRAIRELCGFYHIEEAAVLSTCNRVEIYVVALSWHCGVRDVTEWMEKTS 181
            REKLAIPEAE+PRAI ELC   HIEEAAVLSTCNR+EIYVVALS H GV++VTEWM KTS
Sbjct: 110  REKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYVVALSKHRGVKEVTEWMSKTS 169

Query: 182  GVAASELRPHLFLLRGSDAINHLFEVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRS 361
            G+  ++L  H FLL   DA  HLFEVSAGLDSL+LG+ QIL +VKQVV  G+GV GFGR+
Sbjct: 170  GIPVADLCQHQFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVNGFGRN 229

Query: 362  LNGLFRYALRVGADVLTKTNIASGPIISVSSAAVELAIIKLPQNLSSTARVLVIGAGKMG 541
            ++GLF++A+ VG  V T+TNIA+G + SVSSAAVELA++KLP+   + AR+LVIGAGKMG
Sbjct: 230  ISGLFKHAITVGKRVRTETNIAAGAV-SVSSAAVELALMKLPEASHANARMLVIGAGKMG 288

Query: 542  KLVINHLVAKGWTKIVVVNRSEHRVDAIREDLSGVEIIYKPLTEMLTCAGESDVVFTSTA 721
            KLVI HLVAKG TK+VVVNRSE RV AIRE++  VEIIYKPL+EMLTC GE+DVVFTSTA
Sbjct: 289  KLVIKHLVAKGCTKMVVVNRSEERVAAIREEIKDVEIIYKPLSEMLTCIGEADVVFTSTA 348

Query: 722  SNIPLFMKDNVETLPPVSTMNGGSRLFFDISVPRNVGSCVSDVENTQVYNVDDFKEVLAP 901
            S  PLF+KD+V+ LPP +   GG RLF DISVPRNVGSC+SD+E+ +VYNVDD KEV+A 
Sbjct: 349  SENPLFLKDDVKELPPATDEVGGRRLFVDISVPRNVGSCLSDLESVRVYNVDDLKEVVAA 408

Query: 902  KME-----AMEAQAIVAKNLDDFRDKMDSFETVPTIKNLRALVETIRITELERCLSKIKH 1066
              E     AMEAQAI+ +    F    DS ETVPTIK LRA  E IR+ ELE+CL K+  
Sbjct: 409  NKEDRLRKAMEAQAIIGEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELEKCLGKMGD 468

Query: 1067 DIPKKTRRAIEDLS 1108
            DI KKT+RA++DLS
Sbjct: 469  DINKKTQRAVDDLS 482


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