BLASTX nr result

ID: Coptis25_contig00026496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026496
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31464.3| unnamed protein product [Vitis vinifera]               84   1e-14
emb|CAN82378.1| hypothetical protein VITISV_036229 [Vitis vinifera]    84   1e-14
emb|CBI31022.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002529583.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|XP_002523187.1| Early endosome antigen, putative [Ricinus co...    55   6e-06

>emb|CBI31464.3| unnamed protein product [Vitis vinifera]
          Length = 926

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 37/181 (20%)
 Frame = -2

Query: 453 LKGELLREKGCSAFKKDKGRDAIKKRIDDVISRLDSVIRENAKL------DTSCDDSRCF 292
           +KGE+LREKG S+ + DK  D  K+RI++VI +L+++I+  ++L      D    + + F
Sbjct: 368 VKGEILREKGLSSRRSDKDPDDPKRRIEEVIVKLNNLIKWKSELGETFHDDFGIHEEQNF 427

Query: 291 DEK---------------------------DSIS----RPLSEEVRQQKEEQEDSDMRTV 205
            EK                           D++S      L  E+++ K++ ED  ++++
Sbjct: 428 PEKRLSRLDITDQLEMGIDTLEDVMEKVGSDTVSLAGDEELQTEIKKLKQDVEDLALQSM 487

Query: 204 IMNDISVILHKSLVKDLHYKLHKYDTMNQIRNEVSEVFFRETVKEWNHKIESYNVESHIR 25
           IM   +VIL K L+K+ + K + +D    IR  +    FRE V +WN  +ES   E+ IR
Sbjct: 488 IMEATNVILFKGLMKEFYIKFYNHDAETLIRECICRDIFREMVIDWNQNLESSEAEAQIR 547

Query: 24  E 22
           E
Sbjct: 548 E 548


>emb|CAN82378.1| hypothetical protein VITISV_036229 [Vitis vinifera]
          Length = 1395

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 37/181 (20%)
 Frame = -2

Query: 453  LKGELLREKGCSAFKKDKGRDAIKKRIDDVISRLDSVIRENAKL------DTSCDDSRCF 292
            +KGE++REKG S+ + DK  D  K+RI++VI +L+++I+  ++L      D    + + F
Sbjct: 837  VKGEIJREKGLSSRRSDKDPDXPKRRIEEVIVKLNNLIKWKSELGETFHDDFGIHEEQNF 896

Query: 291  DEK---------------------------DSIS----RPLSEEVRQQKEEQEDSDMRTV 205
             EK                           D++S      L  E+++ K++ ED  ++++
Sbjct: 897  PEKRLSRLDITDQLEMGIDTLEDVMEKVGSDTVSLAGDEELQTEIKKLKQDVEDLALQSM 956

Query: 204  IMNDISVILHKSLVKDLHYKLHKYDTMNQIRNEVSEVFFRETVKEWNHKIESYNVESHIR 25
            IM   +VIL K L+K+ + K + +D    IR  +    FRE V +WN  +ES   E+ IR
Sbjct: 957  IMEATNVILFKGLMKEFYIKFYNHDAETLIRECICRDIFREMVIDWNQNLESSEAEAQIR 1016

Query: 24   E 22
            E
Sbjct: 1017 E 1017


>emb|CBI31022.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 32/146 (21%)
 Frame = -2

Query: 453 LKGELLREKGCSA-FKKDKGRDAIKKRIDDVISRLDSVIRENAKLDTSCDDSRCF----- 292
           LKG+ L+E+G S   +KDK  DA++K+I +VI +LD ++ EN KL    +++        
Sbjct: 381 LKGKFLKERGSSLPLRKDKEFDAMRKKIPEVILKLDDILVENEKLPAFSNNAESLGSLKD 440

Query: 291 -----------------DEKDSISRPLSEEVRQQKE-----EQEDSDMRTVIMNDISVIL 178
                            D K  I   +  E  Q  E     E EDSDM  +IM  +S I+
Sbjct: 441 RLDTLLSENHQLRDSLTDRKKEIYEVILREAAQNAETTSKYEIEDSDMEFIIMQGLSAII 500

Query: 177 HKSLVKDLHYKLH----KYDTMNQIR 112
           ++ ++KD   KL+    KYD  N+ R
Sbjct: 501 YREVMKDAEAKLNIMNVKYDCANEAR 526


>ref|XP_002529583.1| conserved hypothetical protein [Ricinus communis]
           gi|223530959|gb|EEF32817.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 792

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 37/181 (20%)
 Frame = -2

Query: 453 LKGELLREKGCSAFKKDKGRDAIKKRIDDVISRLDSVIRENAKLDTSCDD---------- 304
           LK E+   KG S   +++   + K+RI DVI R+ +++  NA+L  + +D          
Sbjct: 93  LKREISGGKGSSDAGREEDLVSSKRRIQDVIERMQNLVNWNAELGENYEDDEGDENVEGS 152

Query: 303 --------------------SRCFDEK-------DSISRPLSEEVRQQKEEQEDSDMRTV 205
                               S    EK       D +S  L +E+R  KEE+ED+ ++T+
Sbjct: 153 STKRLCNFTTTQQEGSLAEISEDGQEKVNKISISDVVSEELRKEIRMLKEEKEDASLQTM 212

Query: 204 IMNDISVILHKSLVKDLHYKLHKYDTMNQIRNEVSEVFFRETVKEWNHKIESYNVESHIR 25
           IM      + +  V +   +L +YD    I   + E   ++ V EWN ++  Y +++ IR
Sbjct: 213 IMEQTYATIWEGCVYESSTELLRYDLEILITKGIHEDLLKKMVNEWNGQMGCYKMDAQIR 272

Query: 24  E 22
           E
Sbjct: 273 E 273


>ref|XP_002523187.1| Early endosome antigen, putative [Ricinus communis]
           gi|223537594|gb|EEF39218.1| Early endosome antigen,
           putative [Ricinus communis]
          Length = 903

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
 Frame = -2

Query: 453 LKGELLREKGCSA-FKKDKGRDAIKKRIDDVISRLDSVIRENAKLDTSCDDSRCFDEKDS 277
           LK E LRE+G S   +KDK  D +KK+I +VI +LD ++ EN KL +  ++  C D    
Sbjct: 400 LKREYLRERGSSLPVRKDKELDTLKKKIPEVILKLDGILAENEKLPSFSNNGDCLDNLKD 459

Query: 276 ISRPLSEEVRQQKEEQEDSD-----MRTVIMNDISVILHKSLVKD----LHYKLHKYDTM 124
               L  E  Q ++   D       + + + N    IL +SL ++    +   L     +
Sbjct: 460 RLESLRLENHQLRDSLADKKKEIKCLSSQVSNASDKILERSLAEENLSKMLENLKSTLEV 519

Query: 123 NQIRNEVSEVFFRETVKEWNHKIESYNVE 37
           ++I+  +S+  F+  +KE   +++ ++ E
Sbjct: 520 SRIQTAISDDLFKFLLKEVVGQMKGFSEE 548


Top