BLASTX nr result

ID: Coptis25_contig00026492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026492
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...    60   4e-07

>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Cucumis sativus]
           gi|449523563|ref|XP_004168793.1| PREDICTED: putative
           SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 3-like
           [Cucumis sativus]
          Length = 1113

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
 Frame = -2

Query: 456 MSSNMIEEVEKIKKIRSSLGLDIPDSDILKALSISKNDANAAIRLILDTPEFFSPSVTVK 277
           M  N I E EK+KKIRS +GLD PDS I + LS +  D + AI+ IL+ P F +  ++V 
Sbjct: 1   MEVNAILE-EKLKKIRSVVGLDFPDSFIHRTLSRNGGDPDEAIKYILENPGFLARPLSVV 59

Query: 276 R--TSTGARVST 247
           R  TSTGARVST
Sbjct: 60  RTVTSTGARVST 71


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