BLASTX nr result

ID: Coptis25_contig00026484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026484
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA59244.1| TPA: putative DUF231 domain containing family pr...    56   4e-06
ref|XP_002448984.1| hypothetical protein SORBIDRAFT_05g002870 [S...    55   8e-06

>tpg|DAA59244.1| TPA: putative DUF231 domain containing family protein [Zea mays]
          Length = 456

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +2

Query: 2   ETLGDWIRREVNTSKTQVFYRTYSPVHFR 88
           ETL DW+R+EVNTSKT V YRTY+PVHFR
Sbjct: 298 ETLSDWLRKEVNTSKTHVIYRTYAPVHFR 326


>ref|XP_002448984.1| hypothetical protein SORBIDRAFT_05g002870 [Sorghum bicolor]
           gi|241934827|gb|EES07972.1| hypothetical protein
           SORBIDRAFT_05g002870 [Sorghum bicolor]
          Length = 469

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = +2

Query: 2   ETLGDWIRREVNTSKTQVFYRTYSPVHFR 88
           +TL DW+R+EVNTSKT V YRTY+PVHFR
Sbjct: 315 QTLSDWLRKEVNTSKTHVIYRTYAPVHFR 343


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