BLASTX nr result

ID: Coptis25_contig00026480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026480
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61501.1| hypothetical protein OsJ_15790 [Oryza sativa Japo...    70   1e-10
ref|XP_002441714.1| hypothetical protein SORBIDRAFT_08g001155 [S...    69   5e-10
emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]    67   1e-09
emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]    66   3e-09
emb|CAN82176.1| hypothetical protein VITISV_015084 [Vitis vinifera]    66   3e-09

>gb|EEE61501.1| hypothetical protein OsJ_15790 [Oryza sativa Japonica Group]
          Length = 285

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/68 (44%), Positives = 45/68 (66%)
 Frame = -1

Query: 254 RVVWKIPIPLKVKFFFWCVMLGRTLTADALIRRSMVVSPICTMCNMLMESISHVFLHCRF 75
           +++WK   P + KFF +C M    LTAD L RR   ++PIC +C+  +ES +H+FL+C F
Sbjct: 134 KIIWKSRAPERCKFFMFCAMKNACLTADNLQRRGWHLAPICHLCSKDIESCTHIFLNCAF 193

Query: 74  ALEVWTLM 51
           + EVW L+
Sbjct: 194 SREVWGLV 201


>ref|XP_002441714.1| hypothetical protein SORBIDRAFT_08g001155 [Sorghum bicolor]
           gi|241942407|gb|EES15552.1| hypothetical protein
           SORBIDRAFT_08g001155 [Sorghum bicolor]
          Length = 370

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/80 (37%), Positives = 45/80 (56%)
 Frame = -1

Query: 272 STPFPSRVVWKIPIPLKVKFFFWCVMLGRTLTADALIRRSMVVSPICTMCNMLMESISHV 93
           S P  ++ +WK   P +V+FFFW V+  R  TA+   R  +  S  C MC+ L E+I H+
Sbjct: 217 SLPIGAKEIWKTAAPPRVRFFFWLVLHRRCWTAERRFRHGLQSSATCVMCDQLPETIDHI 276

Query: 92  FLHCRFALEVWTLMLQPMVM 33
            L C F+ EVW + L  + +
Sbjct: 277 LLGCCFSKEVWHMCLNKLCL 296


>emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]
          Length = 577

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/73 (41%), Positives = 41/73 (56%)
 Frame = -1

Query: 269 TPFPSRVVWKIPIPLKVKFFFWCVMLGRTLTADALIRRSMVVSPICTMCNMLMESISHVF 90
           T FPS  +WK+ +  +V FF W    G+TLT D L RR   ++  C +C    ESI H+ 
Sbjct: 427 TSFPSSAIWKVSVQPRVSFFGWEATWGKTLTLDQLQRRGWALANRCYLCQRHEESIDHIL 486

Query: 89  LHCRFALEVWTLM 51
           LHC  A  +W L+
Sbjct: 487 LHCDKARTLWVLL 499


>emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]
          Length = 843

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
 Frame = -1

Query: 323 RSFYEKIREHDRPPEQRSTPFPSRVVWKIPIPLKVKFFFWCVMLGRTLTADALIRRSMVV 144
           +S+Y  ++  + P       FP++ VW    PL+ +FF W  M G+  T D L+RR   +
Sbjct: 666 KSYYRSLKVENNPL------FPAKEVWGSRAPLRTRFFAWEAMWGKISTVDMLMRRGWSM 719

Query: 143 SPICTMCNMLMESISHVFLHCRFALEVWTLMLQP--MVMAFP 24
              C +C    ES  H+ +HC    E+WT++L    +V  FP
Sbjct: 720 VNRCVLCKENEESTDHILIHCGKTRELWTVVLSSFGVVWVFP 761


>emb|CAN82176.1| hypothetical protein VITISV_015084 [Vitis vinifera]
          Length = 442

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/82 (34%), Positives = 45/82 (54%)
 Frame = -1

Query: 296 HDRPPEQRSTPFPSRVVWKIPIPLKVKFFFWCVMLGRTLTADALIRRSMVVSPICTMCNM 117
           H+      + PFP  ++W   +P KV FF W    G+ LT D L RR  +++  C++C  
Sbjct: 273 HNSLDHSCAVPFPWSIIWSPDVPTKVGFFVWEASWGKVLTQDQLKRRGWILAXRCSLCCA 332

Query: 116 LMESISHVFLHCRFALEVWTLM 51
             E+I+H+ +HC  A  +W L+
Sbjct: 333 EKETINHILVHCSKAKVLWDLV 354


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