BLASTX nr result
ID: Coptis25_contig00026479
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00026479 (363 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263411.1| PREDICTED: probable xyloglucan endotransgluc... 111 5e-23 gb|ABA54988.1| xyloglucan endotransglycosylase hydrolase [Apium ... 105 4e-21 ref|XP_002320268.1| predicted protein [Populus trichocarpa] gi|2... 99 5e-19 gb|ABM91064.1| xyloglucan endotransglycosylase/hydrolase precurs... 98 6e-19 ref|XP_003552017.1| PREDICTED: probable xyloglucan endotransgluc... 96 2e-18 >ref|XP_002263411.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 33 [Vitis vinifera] gi|296086546|emb|CBI32135.3| unnamed protein product [Vitis vinifera] Length = 313 Score = 111 bits (278), Expect = 5e-23 Identities = 52/86 (60%), Positives = 66/86 (76%) Frame = +1 Query: 1 VNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSILDPVEGEEFAKLSQEQKMGM 180 V+YKYAPFV SFG+M+M+GC +D K+ C K +S DPV+GEEFAKLS++Q+MGM Sbjct: 227 VDYKYAPFVVSFGEMEMDGCTFDPKKKGVSCSKGS--VSSRDPVDGEEFAKLSEQQRMGM 284 Query: 181 DDYRKRFMIYSYCKDPRRYKVLPPEC 258 + RK+ M YSYCKD R+KVLPPEC Sbjct: 285 EWARKKLMFYSYCKDSSRFKVLPPEC 310 >gb|ABA54988.1| xyloglucan endotransglycosylase hydrolase [Apium graveolens] Length = 307 Score = 105 bits (262), Expect = 4e-21 Identities = 52/88 (59%), Positives = 61/88 (69%) Frame = +1 Query: 1 VNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSILDPVEGEEFAKLSQEQKMGM 180 VNYKYAPFVAS G ++M GC + CV G S LDPVEG+EFAKLS++Q GM Sbjct: 222 VNYKYAPFVASLGQIEMGGCIKQRADSTQSCVT---GPSTLDPVEGQEFAKLSKQQTTGM 278 Query: 181 DDYRKRFMIYSYCKDPRRYKVLPPECNR 264 D R++ M YSYCKD RYKVLP ECN+ Sbjct: 279 DWARRKHMFYSYCKDTSRYKVLPAECNK 306 >ref|XP_002320268.1| predicted protein [Populus trichocarpa] gi|222861041|gb|EEE98583.1| predicted protein [Populus trichocarpa] Length = 312 Score = 98.6 bits (244), Expect = 5e-19 Identities = 46/86 (53%), Positives = 59/86 (68%) Frame = +1 Query: 1 VNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSILDPVEGEEFAKLSQEQKMGM 180 VNYKYAPFV SF +M+M GC +++T V C K+ S LDPV+G EF +LS EQ + M Sbjct: 228 VNYKYAPFVVSFAEMEMTGCIFNQTALVTSCSKANP--SSLDPVDGPEFVRLSNEQSVAM 285 Query: 181 DDYRKRFMIYSYCKDPRRYKVLPPEC 258 D R++ M YSYC D R+K +PPEC Sbjct: 286 DWARRKLMFYSYCNDRSRFKAMPPEC 311 >gb|ABM91064.1| xyloglucan endotransglycosylase/hydrolase precursor XTH-38 [Populus tremula x Populus tremuloides] Length = 312 Score = 98.2 bits (243), Expect = 6e-19 Identities = 47/86 (54%), Positives = 60/86 (69%) Frame = +1 Query: 1 VNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSILDPVEGEEFAKLSQEQKMGM 180 VNYKYAPFV SF +M+M GC +++T V C K+ S LDPV+G EFA+LS+EQ M Sbjct: 228 VNYKYAPFVVSFAEMEMTGCIFNQTAIVTSCSKANP--SSLDPVDGPEFARLSKEQSAAM 285 Query: 181 DDYRKRFMIYSYCKDPRRYKVLPPEC 258 D R++ M YSYC D R+K +PPEC Sbjct: 286 DWARRKLMFYSYCNDRSRFKGMPPEC 311 >ref|XP_003552017.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 33-like [Glycine max] Length = 310 Score = 96.3 bits (238), Expect = 2e-18 Identities = 47/87 (54%), Positives = 57/87 (65%) Frame = +1 Query: 1 VNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSILDPVEGEEFAKLSQEQKMGM 180 VNYKYAPFV SF +++ GC D T V C K+ S LDPV G EF KLSQ+Q M Sbjct: 226 VNYKYAPFVVSFAQIELSGCISDPTAPVSSCSKASS--SGLDPVNGPEFTKLSQQQIAAM 283 Query: 181 DDYRKRFMIYSYCKDPRRYKVLPPECN 261 D R++ M YSYC D R+KV+PPEC+ Sbjct: 284 DWARRKLMFYSYCNDRSRFKVMPPECH 310