BLASTX nr result

ID: Coptis25_contig00026479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026479
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263411.1| PREDICTED: probable xyloglucan endotransgluc...   111   5e-23
gb|ABA54988.1| xyloglucan endotransglycosylase hydrolase [Apium ...   105   4e-21
ref|XP_002320268.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
gb|ABM91064.1| xyloglucan endotransglycosylase/hydrolase precurs...    98   6e-19
ref|XP_003552017.1| PREDICTED: probable xyloglucan endotransgluc...    96   2e-18

>ref|XP_002263411.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 33 [Vitis vinifera] gi|296086546|emb|CBI32135.3|
           unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/86 (60%), Positives = 66/86 (76%)
 Frame = +1

Query: 1   VNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSILDPVEGEEFAKLSQEQKMGM 180
           V+YKYAPFV SFG+M+M+GC +D  K+   C K    +S  DPV+GEEFAKLS++Q+MGM
Sbjct: 227 VDYKYAPFVVSFGEMEMDGCTFDPKKKGVSCSKGS--VSSRDPVDGEEFAKLSEQQRMGM 284

Query: 181 DDYRKRFMIYSYCKDPRRYKVLPPEC 258
           +  RK+ M YSYCKD  R+KVLPPEC
Sbjct: 285 EWARKKLMFYSYCKDSSRFKVLPPEC 310


>gb|ABA54988.1| xyloglucan endotransglycosylase hydrolase [Apium graveolens]
          Length = 307

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/88 (59%), Positives = 61/88 (69%)
 Frame = +1

Query: 1   VNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSILDPVEGEEFAKLSQEQKMGM 180
           VNYKYAPFVAS G ++M GC   +      CV    G S LDPVEG+EFAKLS++Q  GM
Sbjct: 222 VNYKYAPFVASLGQIEMGGCIKQRADSTQSCVT---GPSTLDPVEGQEFAKLSKQQTTGM 278

Query: 181 DDYRKRFMIYSYCKDPRRYKVLPPECNR 264
           D  R++ M YSYCKD  RYKVLP ECN+
Sbjct: 279 DWARRKHMFYSYCKDTSRYKVLPAECNK 306


>ref|XP_002320268.1| predicted protein [Populus trichocarpa] gi|222861041|gb|EEE98583.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/86 (53%), Positives = 59/86 (68%)
 Frame = +1

Query: 1   VNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSILDPVEGEEFAKLSQEQKMGM 180
           VNYKYAPFV SF +M+M GC +++T  V  C K+    S LDPV+G EF +LS EQ + M
Sbjct: 228 VNYKYAPFVVSFAEMEMTGCIFNQTALVTSCSKANP--SSLDPVDGPEFVRLSNEQSVAM 285

Query: 181 DDYRKRFMIYSYCKDPRRYKVLPPEC 258
           D  R++ M YSYC D  R+K +PPEC
Sbjct: 286 DWARRKLMFYSYCNDRSRFKAMPPEC 311


>gb|ABM91064.1| xyloglucan endotransglycosylase/hydrolase precursor XTH-38 [Populus
           tremula x Populus tremuloides]
          Length = 312

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/86 (54%), Positives = 60/86 (69%)
 Frame = +1

Query: 1   VNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSILDPVEGEEFAKLSQEQKMGM 180
           VNYKYAPFV SF +M+M GC +++T  V  C K+    S LDPV+G EFA+LS+EQ   M
Sbjct: 228 VNYKYAPFVVSFAEMEMTGCIFNQTAIVTSCSKANP--SSLDPVDGPEFARLSKEQSAAM 285

Query: 181 DDYRKRFMIYSYCKDPRRYKVLPPEC 258
           D  R++ M YSYC D  R+K +PPEC
Sbjct: 286 DWARRKLMFYSYCNDRSRFKGMPPEC 311


>ref|XP_003552017.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 33-like [Glycine max]
          Length = 310

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/87 (54%), Positives = 57/87 (65%)
 Frame = +1

Query: 1   VNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSILDPVEGEEFAKLSQEQKMGM 180
           VNYKYAPFV SF  +++ GC  D T  V  C K+    S LDPV G EF KLSQ+Q   M
Sbjct: 226 VNYKYAPFVVSFAQIELSGCISDPTAPVSSCSKASS--SGLDPVNGPEFTKLSQQQIAAM 283

Query: 181 DDYRKRFMIYSYCKDPRRYKVLPPECN 261
           D  R++ M YSYC D  R+KV+PPEC+
Sbjct: 284 DWARRKLMFYSYCNDRSRFKVMPPECH 310


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