BLASTX nr result

ID: Coptis25_contig00026475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026475
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO73539.1| leafy/floricaula [Salix discolor]                       91   7e-17
ref|XP_002322307.1| predicted protein [Populus trichocarpa] gi|7...    91   7e-17
gb|AEK26561.1| leafy protein [Populus tremula]                         91   7e-17
gb|AEK26560.1| leafy protein [Populus tremula] gi|340007713|gb|A...    91   7e-17
gb|AEK26559.1| leafy protein [Populus tremula]                         91   7e-17

>gb|AAO73539.1| leafy/floricaula [Salix discolor]
          Length = 375

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/76 (64%), Positives = 57/76 (75%)
 Frame = -3

Query: 338 PSYPMAMRPRDQHIGRGLEELFQGYRVRYSTVAKIAELGFTVNTLLGMTDGEIDEMLVTN 159
           P+   A+RPR+     GLEELFQ Y +RY T AKIAELGFTVNTLL M D E+DEM+  +
Sbjct: 36  PAAAFAVRPRELC---GLEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDEMM-NS 91

Query: 158 LSQIFHWDLPVGKRYG 111
           LSQIF WDL VG+RYG
Sbjct: 92  LSQIFRWDLLVGERYG 107


>ref|XP_002322307.1| predicted protein [Populus trichocarpa]
           gi|7227895|sp|O04064.1|FLLH_POPTR RecName:
           Full=Floricaula/leafy homolog; AltName: Full=PTLF
           gi|1930094|gb|AAB51533.1| FLORICAULA/LEAFY homolog
           [Populus trichocarpa] gi|222869303|gb|EEF06434.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/76 (64%), Positives = 57/76 (75%)
 Frame = -3

Query: 338 PSYPMAMRPRDQHIGRGLEELFQGYRVRYSTVAKIAELGFTVNTLLGMTDGEIDEMLVTN 159
           P+   A+RPR+     GLEELFQ Y +RY T AKIAELGFTVNTLL M D E+DEM+  +
Sbjct: 36  PAAAFAVRPRELC---GLEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDEMM-NS 91

Query: 158 LSQIFHWDLPVGKRYG 111
           LSQIF WDL VG+RYG
Sbjct: 92  LSQIFRWDLLVGERYG 107


>gb|AEK26561.1| leafy protein [Populus tremula]
          Length = 377

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/76 (64%), Positives = 57/76 (75%)
 Frame = -3

Query: 338 PSYPMAMRPRDQHIGRGLEELFQGYRVRYSTVAKIAELGFTVNTLLGMTDGEIDEMLVTN 159
           P+   A+RPR+     GLEELFQ Y +RY T AKIAELGFTVNTLL M D E+DEM+  +
Sbjct: 36  PAAAFAVRPRELC---GLEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDEMM-NS 91

Query: 158 LSQIFHWDLPVGKRYG 111
           LSQIF WDL VG+RYG
Sbjct: 92  LSQIFRWDLLVGERYG 107


>gb|AEK26560.1| leafy protein [Populus tremula] gi|340007713|gb|AEK26562.1| leafy
           protein [Populus tremula]
          Length = 377

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/76 (64%), Positives = 57/76 (75%)
 Frame = -3

Query: 338 PSYPMAMRPRDQHIGRGLEELFQGYRVRYSTVAKIAELGFTVNTLLGMTDGEIDEMLVTN 159
           P+   A+RPR+     GLEELFQ Y +RY T AKIAELGFTVNTLL M D E+DEM+  +
Sbjct: 36  PAAAFAVRPRELC---GLEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDEMM-NS 91

Query: 158 LSQIFHWDLPVGKRYG 111
           LSQIF WDL VG+RYG
Sbjct: 92  LSQIFRWDLLVGERYG 107


>gb|AEK26559.1| leafy protein [Populus tremula]
          Length = 377

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/76 (64%), Positives = 57/76 (75%)
 Frame = -3

Query: 338 PSYPMAMRPRDQHIGRGLEELFQGYRVRYSTVAKIAELGFTVNTLLGMTDGEIDEMLVTN 159
           P+   A+RPR+     GLEELFQ Y +RY T AKIAELGFTVNTLL M D E+DEM+  +
Sbjct: 36  PAAAFAVRPRELC---GLEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDEMM-NS 91

Query: 158 LSQIFHWDLPVGKRYG 111
           LSQIF WDL VG+RYG
Sbjct: 92  LSQIFRWDLLVGERYG 107


Top