BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026470
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]    93   3e-17
emb|CBI15337.3| unnamed protein product [Vitis vinifera]               91   7e-17
ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...    79   3e-13
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    78   8e-13
gb|ABA95877.2| F-box protein interaction domain containing prote...    76   2e-12

>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
 Frame = +2

Query: 20  LPIEDILRCKSVCKTWYELTRESHFISFQMSKALCQPSRVILAPLLYSCYENYRNSLFLI 199
           LPIEDILRC+SVCKTWY LT++S+F   Q  +      R++             NS+FL+
Sbjct: 32  LPIEDILRCRSVCKTWYGLTKDSYFFKLQFRRTFYHMPRLMF-------ISKSENSVFLL 84

Query: 200 GEEKCS--EIPINHLKLTDYIVTGSCNGLLFIASIYKSDHPAFIYNPSTREYKELP---N 364
             ++C   EI +  +   + IV  SCNGLL +AS  +S +P  I NP TR+Y  LP   N
Sbjct: 85  DGKQCKAREIALPTVLGRNLIVMSSCNGLLCLAS-EESPNPVIISNPITRKYIVLPESVN 143

Query: 365 IDFCTDEVLFGFGFDRIHKKYKVICVY 445
             +   + L G G+D  + KYKV+  Y
Sbjct: 144 ASYSFIQ-LVGLGYDPWNMKYKVVRSY 169


>emb|CBI15337.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 62/152 (40%), Positives = 80/152 (52%), Gaps = 4/152 (2%)
 Frame = +2

Query: 2   SSDLLRLPIEDILRCKSVCKTWYELTRESHFISFQMSKALCQPSRVILAPLLYSCYENYR 181
           S  L RLPIE ILRC+SVCKTW  + +   FI+ Q  K+  QPSRVIL P+         
Sbjct: 160 SEILSRLPIELILRCRSVCKTWNSVIQSPLFINLQARKSHNQPSRVILKPIFGGVTATTM 219

Query: 182 NSLFLIG--EEKCSEIPINHLKLTDYIVTGSCNGLLFIASIYKSDHPAFIYNPSTREYKE 355
           +SLFL+   E K   I     + +   +  SCNGLL I S  +   P +I NP TRE+  
Sbjct: 220 HSLFLLDTEERKSRRIHDKSWRFSGLQIMSSCNGLLCITSDSELG-PVYISNPITREFVI 278

Query: 356 LPNID--FCTDEVLFGFGFDRIHKKYKVICVY 445
           LP+ +  F       G GFD  + KY V+  Y
Sbjct: 279 LPSPETGFSLLRHQVGLGFDSSNGKYIVVRAY 310


>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
           gi|223543465|gb|EEF44996.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 401

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 59/173 (34%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
 Frame = +2

Query: 11  LLRLPIEDILRCKSVCKTWYELTRESHFISFQMSKALCQPSRVILAPLLYSCYENYRNSL 190
           L R PI  +L CK V + WY   R     +  +++A  Q     L  L +S +   R+ L
Sbjct: 31  LSRQPIVSLLECKPVSRHWYTSVRNPLLANMHLNRAAEQN----LCLLFFSDWP--RSKL 84

Query: 191 FLIGEEKCSEIPINHLK------LTDYIVTGSCNGLLFIASIYKSDHPAFIYNPSTREYK 352
            L+  E      +  LK      L+++ V GSCNGL+ +   Y SD P +IYNP T E +
Sbjct: 85  ELVQVEHPEPRKLKTLKTPFESVLSEFEVVGSCNGLICLYD-YFSDDPLYIYNPFTIECR 143

Query: 353 ELPNIDFCTDEVL----FGFGFDRIHKKYKVICVYRSYYGDIDYEGSDTEAAV 499
           ELP ++     V+    FGFGF    ++YKVI +     G+ D+ G   EA V
Sbjct: 144 ELPRVEASPHSVICRVVFGFGFHPKMEEYKVIKIVYYKQGNNDFSGGAPEAFV 196


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
 Frame = +2

Query: 11  LLRLPIEDILRCKSVCKTWYELTRESHFISFQMSKALCQPSRVILAPLLYSCYENYRNSL 190
           L RLPI  +++ K VC+ W  L ++   +   +S   C         L+  C    RN+L
Sbjct: 37  LSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLS---CSTQDTDHPCLILHCDFPIRNNL 93

Query: 191 FLIG-------EEKCSEIPINHLK-LTDYIVTGSCNGLLFIASIYKSDHPAFIYNPSTRE 346
           + +        +EK   IP      + ++ V GSCNGLL ++    +D   +IYNP T  
Sbjct: 94  YFVDFAAHEEEKEKVKRIPAPFSSMMPEFEVVGSCNGLLCLSDSLYND-SLYIYNPFTGC 152

Query: 347 YKELP-NIDFCTDEVLFGFGFDRIHKKYKVICV--YRSYYG 460
           YKELP ++ +   EV+ GFGF+   K+YKVI +  YR+ +G
Sbjct: 153 YKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNGHG 193


>gb|ABA95877.2| F-box protein interaction domain containing protein, expressed
           [Oryza sativa Japonica Group]
          Length = 410

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 15/160 (9%)
 Frame = +2

Query: 11  LLRLPIEDILRCKSVCKTWYELTRESHFISFQMSKALCQPSRVILAPLLYSCYENYRNSL 190
           LLRLP + ++R KSVCK W+ +     FI+  +  +  +PS +++AP  Y   +N +N  
Sbjct: 44  LLRLPSKSLMRFKSVCKAWHAMISSPIFINAHLEWSKLKPSSLLMAPGFYQKQKNGQNIA 103

Query: 191 FLIGEEKCSEIPINHLKLTDY-------IVTGS----CNGLLFIASIYKSDHPAFIYNPS 337
           FL+G  K      N + L D+       + T +    C+GLL ++++ K      IYNPS
Sbjct: 104 FLMGLYKYQGGNNNVVHLHDFPRDFPQVLDTWTRPVHCDGLLLVSNMSKK---MIIYNPS 160

Query: 338 TREYKELP----NIDFCTDEVLFGFGFDRIHKKYKVICVY 445
           TRE   LP    N+   T     GFGFD    KYKV  V+
Sbjct: 161 TREIVSLPKGSRNLHKGTG---IGFGFDPRSSKYKVARVF 197