BLASTX nr result

ID: Coptis25_contig00026469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026469
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298486.1| predicted protein [Populus trichocarpa] gi|2...   257   9e-67
tpg|DAA59152.1| TPA: putative clathrin heavy chain family protei...   250   1e-64
gb|AFW81520.1| putative clathrin heavy chain family protein [Zea...   249   1e-64
gb|AFW81519.1| putative clathrin heavy chain family protein [Zea...   249   1e-64
gb|AFW55790.1| putative clathrin heavy chain family protein [Zea...   249   1e-64

>ref|XP_002298486.1| predicted protein [Populus trichocarpa] gi|222845744|gb|EEE83291.1|
            predicted protein [Populus trichocarpa]
          Length = 1711

 Score =  257 bits (656), Expect = 9e-67
 Identities = 123/148 (83%), Positives = 134/148 (90%)
 Frame = -3

Query: 543  QKVEKHELLEMRRVAAYIYKKGGRWKQSIALSTKDNQYKDAMETCSQSGEHELSEELLAY 364
            QK+EKHELLEMRRVAAYIYKK GRWKQSIALS KDN YKD METCSQSGE ELSEELL Y
Sbjct: 1523 QKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDCMETCSQSGERELSEELLVY 1582

Query: 363  FIEQGKKECFASCLFVCYDLIQPEVVLELAWMNNMVDFAFPYLLQFIREYTSKVDEFVKD 184
            FIEQGKKECFA+CLFVCYD+I+P+V LELAWMNNM+DFAFPYLLQFIREYTSKVDE +K+
Sbjct: 1583 FIEQGKKECFAACLFVCYDMIRPDVALELAWMNNMIDFAFPYLLQFIREYTSKVDELIKE 1642

Query: 183  KFVSLSEVKAKETEEKDMVAQQALFPAL 100
            K  +LSEVKAKE EEKDMVAQQ ++  L
Sbjct: 1643 KLEALSEVKAKEKEEKDMVAQQNMYAQL 1670


>tpg|DAA59152.1| TPA: putative clathrin heavy chain family protein [Zea mays]
          Length = 394

 Score =  250 bits (638), Expect = 1e-64
 Identities = 119/148 (80%), Positives = 132/148 (89%)
 Frame = -3

Query: 543 QKVEKHELLEMRRVAAYIYKKGGRWKQSIALSTKDNQYKDAMETCSQSGEHELSEELLAY 364
           QK+EKHELLEMRR+AAYIYKK GRWKQSIALS KDN YKD METCSQSG+ ELSE+LL Y
Sbjct: 195 QKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVY 254

Query: 363 FIEQGKKECFASCLFVCYDLIQPEVVLELAWMNNMVDFAFPYLLQFIREYTSKVDEFVKD 184
           FIEQGKKECFASCLF+CYDLI+P+V LELAWMNNMVDFAFPYLLQFIREYTSKVD+ VKD
Sbjct: 255 FIEQGKKECFASCLFICYDLIRPDVALELAWMNNMVDFAFPYLLQFIREYTSKVDDLVKD 314

Query: 183 KFVSLSEVKAKETEEKDMVAQQALFPAL 100
           K  S +E +AKE EEKD+VAQQ ++  L
Sbjct: 315 KIESQNEERAKEKEEKDLVAQQNMYAQL 342


>gb|AFW81520.1| putative clathrin heavy chain family protein [Zea mays]
          Length = 461

 Score =  249 bits (637), Expect = 1e-64
 Identities = 119/148 (80%), Positives = 131/148 (88%)
 Frame = -3

Query: 543 QKVEKHELLEMRRVAAYIYKKGGRWKQSIALSTKDNQYKDAMETCSQSGEHELSEELLAY 364
           QK+EKHELLEMRR+AAYIYKK GRWKQSIALS KDN YKD METCSQSG+ ELSE+LL Y
Sbjct: 265 QKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVY 324

Query: 363 FIEQGKKECFASCLFVCYDLIQPEVVLELAWMNNMVDFAFPYLLQFIREYTSKVDEFVKD 184
           FIEQGKKECFASCLF+CYDLI+P+V LELAWMNNMVDFAFPYLLQFIREYTSKVD+ VKD
Sbjct: 325 FIEQGKKECFASCLFICYDLIRPDVALELAWMNNMVDFAFPYLLQFIREYTSKVDDLVKD 384

Query: 183 KFVSLSEVKAKETEEKDMVAQQALFPAL 100
           K  S  E +AKE EEKD+VAQQ ++  L
Sbjct: 385 KIESQKEERAKEKEEKDLVAQQNMYAQL 412


>gb|AFW81519.1| putative clathrin heavy chain family protein [Zea mays]
          Length = 668

 Score =  249 bits (637), Expect = 1e-64
 Identities = 119/148 (80%), Positives = 131/148 (88%)
 Frame = -3

Query: 543 QKVEKHELLEMRRVAAYIYKKGGRWKQSIALSTKDNQYKDAMETCSQSGEHELSEELLAY 364
           QK+EKHELLEMRR+AAYIYKK GRWKQSIALS KDN YKD METCSQSG+ ELSE+LL Y
Sbjct: 472 QKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVY 531

Query: 363 FIEQGKKECFASCLFVCYDLIQPEVVLELAWMNNMVDFAFPYLLQFIREYTSKVDEFVKD 184
           FIEQGKKECFASCLF+CYDLI+P+V LELAWMNNMVDFAFPYLLQFIREYTSKVD+ VKD
Sbjct: 532 FIEQGKKECFASCLFICYDLIRPDVALELAWMNNMVDFAFPYLLQFIREYTSKVDDLVKD 591

Query: 183 KFVSLSEVKAKETEEKDMVAQQALFPAL 100
           K  S  E +AKE EEKD+VAQQ ++  L
Sbjct: 592 KIESQKEERAKEKEEKDLVAQQNMYAQL 619


>gb|AFW55790.1| putative clathrin heavy chain family protein [Zea mays]
          Length = 1707

 Score =  249 bits (637), Expect = 1e-64
 Identities = 119/148 (80%), Positives = 131/148 (88%)
 Frame = -3

Query: 543  QKVEKHELLEMRRVAAYIYKKGGRWKQSIALSTKDNQYKDAMETCSQSGEHELSEELLAY 364
            QK+EKHELLEMRR+AAYIYKK GRWKQSIALS KDN YKD METCSQSG+ ELSE+LL Y
Sbjct: 1511 QKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVY 1570

Query: 363  FIEQGKKECFASCLFVCYDLIQPEVVLELAWMNNMVDFAFPYLLQFIREYTSKVDEFVKD 184
            FIEQGKKECFASCLF+CYDLI+P+V LELAWMNNMVDFAFPYLLQFIREYTSKVD+ VKD
Sbjct: 1571 FIEQGKKECFASCLFICYDLIRPDVALELAWMNNMVDFAFPYLLQFIREYTSKVDDLVKD 1630

Query: 183  KFVSLSEVKAKETEEKDMVAQQALFPAL 100
            K  S  E +AKE EEKD+VAQQ ++  L
Sbjct: 1631 KIESQKEERAKEKEEKDLVAQQNMYAQL 1658


Top