BLASTX nr result

ID: Coptis25_contig00026462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026462
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36348.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_002329045.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
gb|ABK95820.1| unknown [Populus trichocarpa]                           84   1e-14
ref|XP_002517662.1| conserved hypothetical protein [Ricinus comm...    82   6e-14
ref|XP_002265017.2| PREDICTED: uncharacterized protein LOC100245...    81   1e-13

>emb|CBI36348.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/80 (55%), Positives = 57/80 (71%), Gaps = 7/80 (8%)
 Frame = +1

Query: 172 SNPEPEDHNTR-------AFSSPEDLRYLWKLGAGSVVGAVVIKYGSILFPAITRPNIVW 330
           SNPE E+ ++        +F S EDL+YL KLG GSVVGA VIKYGSI+ P ITRPNI+ 
Sbjct: 45  SNPEREEQDSSMNNNISPSFISEEDLKYLVKLGGGSVVGAAVIKYGSIILPEITRPNIIQ 104

Query: 331 ALVLISTPVLVSAVILTKHS 390
           AL+++S PV+V+  +L K S
Sbjct: 105 ALIMVSAPVVVAVWLLLKQS 124


>ref|XP_002329045.1| predicted protein [Populus trichocarpa] gi|222839716|gb|EEE78039.1|
           predicted protein [Populus trichocarpa]
          Length = 119

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/69 (62%), Positives = 53/69 (76%)
 Frame = +1

Query: 184 PEDHNTRAFSSPEDLRYLWKLGAGSVVGAVVIKYGSILFPAITRPNIVWALVLISTPVLV 363
           P  + T + +S ED  YL KLGAGS+ GA VIKYGSILFP ITRPNI+ AL++ISTPV+V
Sbjct: 48  PSLNGTTSGTSQEDWNYLLKLGAGSLAGAAVIKYGSILFPEITRPNILQALIMISTPVVV 107

Query: 364 SAVILTKHS 390
           + V+L K S
Sbjct: 108 AVVLLIKLS 116


>gb|ABK95820.1| unknown [Populus trichocarpa]
          Length = 149

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/69 (62%), Positives = 53/69 (76%)
 Frame = +1

Query: 184 PEDHNTRAFSSPEDLRYLWKLGAGSVVGAVVIKYGSILFPAITRPNIVWALVLISTPVLV 363
           P  + T + +S ED  YL KLGAGS+ GA VIKYGSILFP ITRPNI+ AL++ISTPV+V
Sbjct: 78  PSLNGTTSGTSQEDWNYLLKLGAGSLAGAAVIKYGSILFPEITRPNILQALIMISTPVVV 137

Query: 364 SAVILTKHS 390
           + V+L K S
Sbjct: 138 AVVLLIKLS 146


>ref|XP_002517662.1| conserved hypothetical protein [Ricinus communis]
           gi|223543294|gb|EEF44826.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 76

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/57 (66%), Positives = 46/57 (80%)
 Frame = +1

Query: 220 EDLRYLWKLGAGSVVGAVVIKYGSILFPAITRPNIVWALVLISTPVLVSAVILTKHS 390
           EDL +LWKLGAGSV GA +IKYGSILFP ITRPNI+ AL ++ TPV ++ V+L K S
Sbjct: 16  EDLSFLWKLGAGSVAGAAIIKYGSILFPEITRPNILLALAIVLTPVFLAIVLLIKQS 72


>ref|XP_002265017.2| PREDICTED: uncharacterized protein LOC100245821 [Vitis vinifera]
          Length = 72

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/62 (62%), Positives = 49/62 (79%)
 Frame = +1

Query: 205 AFSSPEDLRYLWKLGAGSVVGAVVIKYGSILFPAITRPNIVWALVLISTPVLVSAVILTK 384
           +F S EDL+YL KLG GSVVGA VIKYGSI+ P ITRPNI+ AL+++S PV+V+  +L K
Sbjct: 8   SFISEEDLKYLVKLGGGSVVGAAVIKYGSIILPEITRPNIIQALIMVSAPVVVAVWLLLK 67

Query: 385 HS 390
            S
Sbjct: 68  QS 69


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