BLASTX nr result

ID: Coptis25_contig00026456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026456
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510983.1| conserved hypothetical protein [Ricinus comm...    64   1e-08

>ref|XP_002510983.1| conserved hypothetical protein [Ricinus communis]
           gi|223550098|gb|EEF51585.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 323

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
 Frame = +2

Query: 26  DGALFFDP----HFKIVHISGSYPRLNIYSQATRKWSVYNLDLDPCVTDSFWSPRYVFLD 193
           + AL FDP    H+K+V       RL ++S  +  W+    +L   ++   W    ++  
Sbjct: 134 NAALAFDPSISPHYKVVLFDSRNNRLLVFSSKSWSWNPLKYELQDVLSILRWDKESIYFC 193

Query: 194 GLLYNLSMSGHLV--IIDLQQIDS---RAIKLPDIVVAGNLIGCLGVSQGILHYSWSDKH 358
           G +Y LS SGH+V   ID +++ S   RAIKLP        + C GVS G LHY+  D  
Sbjct: 194 GAIYKLSKSGHVVKFSIDEEKVASDRVRAIKLPKYAPE---MRCYGVSNGSLHYANVD-D 249

Query: 359 SNMSVWML 382
            N+ +W+L
Sbjct: 250 GNLQIWVL 257


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