BLASTX nr result

ID: Coptis25_contig00026450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026450
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533410.1| conserved hypothetical protein [Ricinus comm...   139   2e-31
ref|XP_002318554.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
emb|CBI15445.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_002276096.1| PREDICTED: carbon catabolite repressor prote...   137   1e-30
ref|XP_003543162.1| PREDICTED: carbon catabolite repressor prote...   135   3e-30

>ref|XP_002533410.1| conserved hypothetical protein [Ricinus communis]
           gi|223526739|gb|EEF28968.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 447

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/108 (61%), Positives = 81/108 (75%)
 Frame = +1

Query: 154 RPWVFNSRHNCSHLQDNIVIVSYNILGVENAKKHPHLYNNFSQQYLNWERRKLRIRNELN 333
           R WVF S ++ S  +D +V+VSYNILGVENA  HP LY     ++L+W+RRK  I  E+N
Sbjct: 76  RRWVF-SDNDFSAYKDRVVVVSYNILGVENASNHPDLYFKIPPKFLDWDRRKELICEEIN 134

Query: 334 SYNASILCLQEVDRFDDLAKILKIDGFTGIYKARTGEACDGCAIFWRE 477
            YNA ILC QEVDRFDDL  +L+ D F G+YKARTGEACDGCAIFW++
Sbjct: 135 HYNAGILCFQEVDRFDDLDCLLQEDSFRGVYKARTGEACDGCAIFWKD 182


>ref|XP_002318554.1| predicted protein [Populus trichocarpa] gi|222859227|gb|EEE96774.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/109 (57%), Positives = 79/109 (72%)
 Frame = +1

Query: 154 RPWVFNSRHNCSHLQDNIVIVSYNILGVENAKKHPHLYNNFSQQYLNWERRKLRIRNELN 333
           R W F S H+    +D +V VSYNILGVENA KHP LY     +++ WERRK  I  E++
Sbjct: 85  RKWTF-SCHDSPAYEDRVVFVSYNILGVENASKHPDLYFKIPLEFMEWERRKELICKEMH 143

Query: 334 SYNASILCLQEVDRFDDLAKILKIDGFTGIYKARTGEACDGCAIFWREE 480
            YNA ILC Q VDRFDDL  +L+ DG+ G+YKARTGEACDGCA+FW+++
Sbjct: 144 HYNAGILCFQAVDRFDDLDDLLQKDGYRGVYKARTGEACDGCAVFWKDK 192


>emb|CBI15445.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/109 (57%), Positives = 81/109 (74%)
 Frame = +1

Query: 154 RPWVFNSRHNCSHLQDNIVIVSYNILGVENAKKHPHLYNNFSQQYLNWERRKLRIRNELN 333
           R WVF++R + S  +D +V+VSYNILGVENA  HP LY+    + L+W RR+  I  E+N
Sbjct: 92  RRWVFSTR-DLSDYKDKVVVVSYNILGVENASNHPDLYSKVPTKLLDWNRRRKLINKEIN 150

Query: 334 SYNASILCLQEVDRFDDLAKILKIDGFTGIYKARTGEACDGCAIFWREE 480
            YN SILC QEVDRF+DL  +LK  GF G+YKARTGEA DGCA+FW+++
Sbjct: 151 QYNPSILCFQEVDRFNDLNNLLKKGGFKGVYKARTGEAYDGCAMFWKDD 199


>ref|XP_002276096.1| PREDICTED: carbon catabolite repressor protein 4 homolog 5-like
           [Vitis vinifera]
          Length = 590

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/109 (57%), Positives = 81/109 (74%)
 Frame = +1

Query: 154 RPWVFNSRHNCSHLQDNIVIVSYNILGVENAKKHPHLYNNFSQQYLNWERRKLRIRNELN 333
           R WVF++R + S  +D +V+VSYNILGVENA  HP LY+    + L+W RR+  I  E+N
Sbjct: 92  RRWVFSTR-DLSDYKDKVVVVSYNILGVENASNHPDLYSKVPTKLLDWNRRRKLINKEIN 150

Query: 334 SYNASILCLQEVDRFDDLAKILKIDGFTGIYKARTGEACDGCAIFWREE 480
            YN SILC QEVDRF+DL  +LK  GF G+YKARTGEA DGCA+FW+++
Sbjct: 151 QYNPSILCFQEVDRFNDLNNLLKKGGFKGVYKARTGEAYDGCAMFWKDD 199


>ref|XP_003543162.1| PREDICTED: carbon catabolite repressor protein 4 homolog 5-like
           [Glycine max]
          Length = 405

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/109 (55%), Positives = 81/109 (74%)
 Frame = +1

Query: 154 RPWVFNSRHNCSHLQDNIVIVSYNILGVENAKKHPHLYNNFSQQYLNWERRKLRIRNELN 333
           R WV +S+ + S+  D +++VSYNILGVENA  HP LY+N    +L W+RRK  I  E+N
Sbjct: 29  RRWVVSSKDS-SNCTDKVLVVSYNILGVENASNHPDLYSNIPHSFLEWDRRKRLILEEIN 87

Query: 334 SYNASILCLQEVDRFDDLAKILKIDGFTGIYKARTGEACDGCAIFWREE 480
           +YNASILC QEVD F+DL  + +  GF G+YKARTGEA DGCA+FW+++
Sbjct: 88  NYNASILCFQEVDHFNDLDDLFQNSGFKGVYKARTGEAQDGCAVFWKDK 136


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