BLASTX nr result

ID: Coptis25_contig00026446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026446
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264706.1| PREDICTED: putative kinase-like protein TMKL...   135   5e-30
ref|XP_002303085.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002521132.1| Serine/threonine-protein kinase PBS1, putati...   124   6e-27
ref|NP_189109.1| putative kinase-like protein TMKL1 [Arabidopsis...   120   9e-26
gb|ACN59322.1| leucine-rich repeat receptor-like protein kinase ...   120   9e-26

>ref|XP_002264706.1| PREDICTED: putative kinase-like protein TMKL1-like [Vitis vinifera]
          Length = 668

 Score =  135 bits (339), Expect = 5e-30
 Identities = 80/124 (64%), Positives = 83/124 (66%)
 Frame = -2

Query: 374 LCGGPLRKCKSGSTGLSSRTIAAIVIGLMTSAVVLASVLIGYVQXXXXXXXXXXXXXXXX 195
           LCG PLR CKS S GLS   IA IVIGLMT +VVLAS+LIGYVQ                
Sbjct: 279 LCGSPLRSCKSNS-GLSPGAIAGIVIGLMTGSVVLASLLIGYVQGKKRKSRGENEEEFEE 337

Query: 194 XXXXXXXXXXXXXXGKLILFQGAEHLTLEDVLNATGQVMEKTSYGTVYKAKLADGGTIAL 15
                          KLILFQG EHLTLEDVLNATGQVMEKTSYGTVYKAKLADGG+IAL
Sbjct: 338 GEDDENGSGGSGDG-KLILFQGGEHLTLEDVLNATGQVMEKTSYGTVYKAKLADGGSIAL 396

Query: 14  RLLR 3
           RLLR
Sbjct: 397 RLLR 400


>ref|XP_002303085.1| predicted protein [Populus trichocarpa] gi|222844811|gb|EEE82358.1|
           predicted protein [Populus trichocarpa]
          Length = 678

 Score =  129 bits (325), Expect = 2e-28
 Identities = 79/126 (62%), Positives = 83/126 (65%), Gaps = 2/126 (1%)
 Frame = -2

Query: 374 LCGGPLRKCKSGSTGLSSRTIAAIVIGLMTSAVVLASVLIGYVQXXXXXXXXXXXXXXXX 195
           LCG PLR C SGS+ LS   IA IVIGLMT  VVLAS+LIGY+Q                
Sbjct: 285 LCGLPLRSC-SGSSRLSPGAIAGIVIGLMTGVVVLASLLIGYMQNKRRKGMGDSDDDMEE 343

Query: 194 XXXXXXXXXXXXXXG--KLILFQGAEHLTLEDVLNATGQVMEKTSYGTVYKAKLADGGTI 21
                         G  KLILFQG EHLTLEDVLNATGQVMEKTSYGTVYKAKLADGGTI
Sbjct: 344 ESGDDGVGGVGGVGGEGKLILFQGGEHLTLEDVLNATGQVMEKTSYGTVYKAKLADGGTI 403

Query: 20  ALRLLR 3
           ALRL+R
Sbjct: 404 ALRLMR 409


>ref|XP_002521132.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223539701|gb|EEF41283.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 687

 Score =  124 bits (312), Expect = 6e-27
 Identities = 76/128 (59%), Positives = 81/128 (63%), Gaps = 4/128 (3%)
 Frame = -2

Query: 374 LCGGPLRKCKSGSTGLSSRTIAAIVIGLMTSAVVLASVLIGYVQXXXXXXXXXXXXXXXX 195
           LCG PLR C SGS+ LSS  IA IVIGLMT  VVLAS+ IGY+Q                
Sbjct: 292 LCGLPLRSC-SGSSRLSSGAIAGIVIGLMTGVVVLASLSIGYMQNKKRKGREDSEDELEE 350

Query: 194 XXXXXXXXXXXXXXG----KLILFQGAEHLTLEDVLNATGQVMEKTSYGTVYKAKLADGG 27
                              KLILFQG EHLTL+DVLNATGQV EKT+YGTVYKAKLADGG
Sbjct: 351 VEDEENGGSGGNAGSGGEGKLILFQGGEHLTLDDVLNATGQVTEKTTYGTVYKAKLADGG 410

Query: 26  TIALRLLR 3
           TIALRLLR
Sbjct: 411 TIALRLLR 418


>ref|NP_189109.1| putative kinase-like protein TMKL1 [Arabidopsis thaliana]
           gi|464900|sp|P33543.1|TMKL1_ARATH RecName: Full=Putative
           kinase-like protein TMKL1; Flags: Precursor
           gi|313190|emb|CAA51385.1| TMKL1 [Arabidopsis thaliana]
           gi|9279794|dbj|BAB01215.1| receptor kinase [Arabidopsis
           thaliana] gi|20259336|gb|AAM13993.1| putative kinase
           TMKL1 precursor [Arabidopsis thaliana]
           gi|332643413|gb|AEE76934.1| putative kinase-like protein
           TMKL1 [Arabidopsis thaliana]
          Length = 674

 Score =  120 bits (302), Expect = 9e-26
 Identities = 69/124 (55%), Positives = 82/124 (66%)
 Frame = -2

Query: 374 LCGGPLRKCKSGSTGLSSRTIAAIVIGLMTSAVVLASVLIGYVQXXXXXXXXXXXXXXXX 195
           LCG PL+ C  GS+ LS   +A +VIGLM+ AVV+AS+LIGY+Q                
Sbjct: 282 LCGLPLKPCL-GSSRLSPGAVAGLVIGLMSGAVVVASLLIGYLQNKKRKSSIESEDDLEE 340

Query: 194 XXXXXXXXXXXXXXGKLILFQGAEHLTLEDVLNATGQVMEKTSYGTVYKAKLADGGTIAL 15
                         GKL++FQG E+LTL+DVLNATGQVMEKTSYGTVYKAKL+DGG IAL
Sbjct: 341 GDEEDEIGEKEGGEGKLVVFQGGENLTLDDVLNATGQVMEKTSYGTVYKAKLSDGGNIAL 400

Query: 14  RLLR 3
           RLLR
Sbjct: 401 RLLR 404


>gb|ACN59322.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis
           thaliana]
          Length = 623

 Score =  120 bits (302), Expect = 9e-26
 Identities = 69/124 (55%), Positives = 82/124 (66%)
 Frame = -2

Query: 374 LCGGPLRKCKSGSTGLSSRTIAAIVIGLMTSAVVLASVLIGYVQXXXXXXXXXXXXXXXX 195
           LCG PL+ C  GS+ LS   +A +VIGLM+ AVV+AS+LIGY+Q                
Sbjct: 231 LCGLPLKPCL-GSSRLSPGAVAGLVIGLMSGAVVVASLLIGYLQNKKRKSSIESEDDLEE 289

Query: 194 XXXXXXXXXXXXXXGKLILFQGAEHLTLEDVLNATGQVMEKTSYGTVYKAKLADGGTIAL 15
                         GKL++FQG E+LTL+DVLNATGQVMEKTSYGTVYKAKL+DGG IAL
Sbjct: 290 GDEEDEIGEKEGGEGKLVVFQGGENLTLDDVLNATGQVMEKTSYGTVYKAKLSDGGNIAL 349

Query: 14  RLLR 3
           RLLR
Sbjct: 350 RLLR 353


Top