BLASTX nr result

ID: Coptis25_contig00026445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026445
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531980.1| conserved hypothetical protein [Ricinus comm...   156   4e-36
ref|XP_003536394.1| PREDICTED: uncharacterized protein LOC100793...   150   2e-34
ref|XP_002307528.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|NP_001235784.1| uncharacterized protein LOC100500538 [Glycin...   144   2e-32
ref|XP_002300893.1| predicted protein [Populus trichocarpa] gi|2...   139   5e-31

>ref|XP_002531980.1| conserved hypothetical protein [Ricinus communis]
           gi|223528377|gb|EEF30416.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  156 bits (394), Expect = 4e-36
 Identities = 92/211 (43%), Positives = 119/211 (56%), Gaps = 5/211 (2%)
 Frame = +2

Query: 23  MATCSCIHSRLQIKDVPHLISRQWNPSSTESFRFLKRNSLK-----VSADLRCSTYLPLG 187
           MATC+ + S  QIK    L+ ++   + +E F  L R +       + + +RCS      
Sbjct: 1   MATCASLFSNTQIKGWRPLVHKKQKFNFSEQFNCLIRRNPSDDYHVLQSSIRCSAVNT-- 58

Query: 188 FTTSSLIDPLSSDATILNQPVDVSGIAPNLTSHTTVNSHAVYEYMQXXXXXXXXXXXXXX 367
                  + L + ATI  +P++      N+  +    S A  +++Q              
Sbjct: 59  -------ELLPTYATISERPLNSFEDVQNINLNVVKTSEATSKFIQSSVVADLDPATAKL 111

Query: 368 XIGILGPLFSAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILVPTRKLIXXXXXXX 547
            IG LGP  SAF FLFI+RIVMSWYPKLPVGKFPY++AYAPTEPILVPTRK+I       
Sbjct: 112 AIGFLGPFLSAFGFLFILRIVMSWYPKLPVGKFPYVIAYAPTEPILVPTRKVIPPVGGVD 171

Query: 548 XXXXXWFGLISFLSEILVGPQGLLKLLSQQV 640
                WFGLISFL+EIL+GPQGLL LLSQQV
Sbjct: 172 VTPVVWFGLISFLNEILLGPQGLLVLLSQQV 202


>ref|XP_003536394.1| PREDICTED: uncharacterized protein LOC100793885 [Glycine max]
          Length = 218

 Score =  150 bits (380), Expect = 2e-34
 Identities = 88/187 (47%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
 Frame = +2

Query: 92  WNPSSTESFRFLKRNSLKVSADLRCSTYLPLG----FTTSSLIDPLSSDATILNQPVDVS 259
           W  S   + R +  NS  +     CS Y  +G     T SSL+D  ++  + LN  VD++
Sbjct: 39  WKSSKYHTKRNVNDNSGVMQC---CSCYTEVGASAGITISSLVDAATTQIS-LNSDVDLN 94

Query: 260 GIAPNLTSHTTVNSHAVYEYMQXXXXXXXXXXXXXXXIGILGPLFSAFSFLFIVRIVMSW 439
            +  ++       SHA  ++M                IG LGP  S F FLFIVRIVMSW
Sbjct: 95  TLKLSMPE----TSHASSDFMTRLVLADLDPATAKLAIGFLGPFLSVFGFLFIVRIVMSW 150

Query: 440 YPKLPVGKFPYILAYAPTEPILVPTRKLIXXXXXXXXXXXXWFGLISFLSEILVGPQGLL 619
           YPKLPVGKFPY++AYAPTEP+L+PTRK+I            WFGLISFL+EILVGPQGLL
Sbjct: 151 YPKLPVGKFPYVIAYAPTEPLLIPTRKVIAPLAGVDVTPVVWFGLISFLNEILVGPQGLL 210

Query: 620 KLLSQQV 640
            LLSQQV
Sbjct: 211 VLLSQQV 217


>ref|XP_002307528.1| predicted protein [Populus trichocarpa] gi|222856977|gb|EEE94524.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  144 bits (364), Expect = 1e-32
 Identities = 74/145 (51%), Positives = 88/145 (60%)
 Frame = +2

Query: 206 IDPLSSDATILNQPVDVSGIAPNLTSHTTVNSHAVYEYMQXXXXXXXXXXXXXXXIGILG 385
           +D   S   I  +P  +  +  N+       S A    +Q               +GILG
Sbjct: 63  VDLAMSHGDISGEPFSIPEVVGNINVGIPKTSDATSNLIQRLMLADLDPAAAKSAVGILG 122

Query: 386 PLFSAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILVPTRKLIXXXXXXXXXXXXW 565
           P  SAFSFLFI+RIVMSWYPKLPVGKFPY+L YAPTEP+L+PTRKLI            W
Sbjct: 123 PFLSAFSFLFILRIVMSWYPKLPVGKFPYVLVYAPTEPLLIPTRKLIPPLGGVDVTPVVW 182

Query: 566 FGLISFLSEILVGPQGLLKLLSQQV 640
           FGL+SFL+EILVGPQGLL LLSQQ+
Sbjct: 183 FGLLSFLNEILVGPQGLLVLLSQQI 207


>ref|NP_001235784.1| uncharacterized protein LOC100500538 [Glycine max]
           gi|255630585|gb|ACU15652.1| unknown [Glycine max]
          Length = 218

 Score =  144 bits (362), Expect = 2e-32
 Identities = 86/188 (45%), Positives = 105/188 (55%), Gaps = 3/188 (1%)
 Frame = +2

Query: 86  RQWNPSSTESFRFLKRNSLKVSADLRCSTYLPLGFTTSSLIDPLSSDATI---LNQPVDV 256
           R W  S   + R +  NS  +     CS Y  +G +    I  L + AT    LN  VD+
Sbjct: 37  RVWKSSKYHTKRNVNGNSGVMQC---CSCYTEVGASAGITISSLVNAATTHISLNSDVDL 93

Query: 257 SGIAPNLTSHTTVNSHAVYEYMQXXXXXXXXXXXXXXXIGILGPLFSAFSFLFIVRIVMS 436
           + +  ++       S A  + M                IG LGP  S F FLFI+RIVMS
Sbjct: 94  NTLKLSIQE----TSPASTDLMTRLVLADLDPDTAKLAIGFLGPFLSVFGFLFILRIVMS 149

Query: 437 WYPKLPVGKFPYILAYAPTEPILVPTRKLIXXXXXXXXXXXXWFGLISFLSEILVGPQGL 616
           WYPKLPVGKFPY++AYAPTEP+L+PTRK+I            WFGLISFL+EILVGPQGL
Sbjct: 150 WYPKLPVGKFPYVIAYAPTEPLLIPTRKVIPPLAGMDVTPVVWFGLISFLNEILVGPQGL 209

Query: 617 LKLLSQQV 640
           L LLSQQV
Sbjct: 210 LVLLSQQV 217


>ref|XP_002300893.1| predicted protein [Populus trichocarpa] gi|222842619|gb|EEE80166.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score =  139 bits (350), Expect = 5e-31
 Identities = 66/90 (73%), Positives = 74/90 (82%)
 Frame = +2

Query: 371 IGILGPLFSAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILVPTRKLIXXXXXXXX 550
           IGILGP  SAFSFLF++RIVMSWYPKLPVGKFPY++AYAPTEP+L+PTRKLI        
Sbjct: 14  IGILGPFLSAFSFLFVLRIVMSWYPKLPVGKFPYVIAYAPTEPLLIPTRKLIPPLGGVDV 73

Query: 551 XXXXWFGLISFLSEILVGPQGLLKLLSQQV 640
               WFGL SFL+EILVGPQGLL LLSQQ+
Sbjct: 74  TPVVWFGLSSFLNEILVGPQGLLVLLSQQI 103


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