BLASTX nr result

ID: Coptis25_contig00026439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026439
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269428.1| PREDICTED: probable E3 ubiquitin-protein lig...   301   1e-79
emb|CAN70237.1| hypothetical protein VITISV_014614 [Vitis vinifera]   301   1e-79
ref|XP_004149076.1| PREDICTED: probable E3 ubiquitin-protein lig...   271   1e-70
ref|XP_002308433.1| predicted protein [Populus trichocarpa] gi|2...   264   1e-68
ref|XP_002533218.1| ankyrin repeat-containing protein, putative ...   247   2e-63

>ref|XP_002269428.1| PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Vitis
           vinifera] gi|297743747|emb|CBI36630.3| unnamed protein
           product [Vitis vinifera]
          Length = 509

 Score =  301 bits (771), Expect = 1e-79
 Identities = 147/203 (72%), Positives = 164/203 (80%), Gaps = 3/203 (1%)
 Frame = -3

Query: 802 GCKHGDSLPTCLDPCVVCLEGKCTVAAEGCGHEFCTRCALYLCSTNSTSTISHGPPGSIT 623
           G ++ DSLPTC DPCVVCLE KCTVAA+GC HEFCT+CALYLCS NS+ST+S  P GSI 
Sbjct: 307 GWRNNDSLPTCQDPCVVCLERKCTVAAQGCDHEFCTKCALYLCSMNSSSTVSQCPLGSIA 366

Query: 622 CPLCRHGIVLFVKLPGTNPTVKEIVRSSLSLTMCACSSETTEP--MLTQFCKPDFRCNPI 449
           CPLCR+GIV FVKLPGT P VKEI R+SLSL+ C CS E  EP  + T FCKPDF C+ I
Sbjct: 367 CPLCRNGIVSFVKLPGTKPLVKEIARTSLSLSFCTCSGEGPEPTSLTTPFCKPDFHCSRI 426

Query: 448 SPLGPSSFRTLSCQRFPSMKLNSSLCMGAPDSSP-LVSCDADRRWRNHVVRCPRPNLHRS 272
           SPLG SSFR+LSCQRF S+KLNSSLCMGAPD+SP LV C  DR  RNH+ RC R  L RS
Sbjct: 427 SPLG-SSFRSLSCQRFSSVKLNSSLCMGAPDTSPSLVPCTVDRNLRNHLARCSRSGLRRS 485

Query: 271 ASHSETRRSWFSSLNQYVATSSG 203
           ASHSE+RRSWFS+LNQYVAT SG
Sbjct: 486 ASHSESRRSWFSALNQYVATGSG 508


>emb|CAN70237.1| hypothetical protein VITISV_014614 [Vitis vinifera]
          Length = 511

 Score =  301 bits (771), Expect = 1e-79
 Identities = 147/203 (72%), Positives = 164/203 (80%), Gaps = 3/203 (1%)
 Frame = -3

Query: 802 GCKHGDSLPTCLDPCVVCLEGKCTVAAEGCGHEFCTRCALYLCSTNSTSTISHGPPGSIT 623
           G ++ DSLPTC DPCVVCLE KCTVAA+GC HEFCT+CALYLCS NS+ST+S  P GSI 
Sbjct: 309 GWRNNDSLPTCQDPCVVCLERKCTVAAQGCDHEFCTKCALYLCSMNSSSTVSQCPLGSIA 368

Query: 622 CPLCRHGIVLFVKLPGTNPTVKEIVRSSLSLTMCACSSETTEP--MLTQFCKPDFRCNPI 449
           CPLCR+GIV FVKLPGT P VKEI R+SLSL+ C CS E  EP  + T FCKPDF C+ I
Sbjct: 369 CPLCRNGIVSFVKLPGTKPLVKEIARTSLSLSFCTCSGEGPEPTSLTTPFCKPDFHCSRI 428

Query: 448 SPLGPSSFRTLSCQRFPSMKLNSSLCMGAPDSSP-LVSCDADRRWRNHVVRCPRPNLHRS 272
           SPLG SSFR+LSCQRF S+KLNSSLCMGAPD+SP LV C  DR  RNH+ RC R  L RS
Sbjct: 429 SPLG-SSFRSLSCQRFSSVKLNSSLCMGAPDTSPSLVPCTVDRNLRNHLARCSRSGLRRS 487

Query: 271 ASHSETRRSWFSSLNQYVATSSG 203
           ASHSE+RRSWFS+LNQYVAT SG
Sbjct: 488 ASHSESRRSWFSALNQYVATGSG 510


>ref|XP_004149076.1| PREDICTED: probable E3 ubiquitin-protein ligase XBOS32-like
           [Cucumis sativus] gi|449517425|ref|XP_004165746.1|
           PREDICTED: probable E3 ubiquitin-protein ligase
           XBOS32-like [Cucumis sativus]
          Length = 510

 Score =  271 bits (693), Expect = 1e-70
 Identities = 135/204 (66%), Positives = 154/204 (75%), Gaps = 4/204 (1%)
 Frame = -3

Query: 802 GCKHGDSLPTCLDPCVVCLEGKCTVAAEGCGHEFCTRCALYLCSTNSTSTISHGPPGSIT 623
           G +  DSL TC DPCVVCLE +CTVAA+GC HEFCTRCALYLCSTN TS++SHGP GSI 
Sbjct: 308 GWRSCDSLLTCQDPCVVCLERECTVAAQGCDHEFCTRCALYLCSTNCTSSVSHGPTGSIA 367

Query: 622 CPLCRHGIVLFVKLPGTNPTVKEIVRSSLSLTMCACSSETTEP--MLTQFCKPDFRCNPI 449
           CPLCR+GIV F+KLP T P  KEI R+SLSL+ C CS E  EP  + T  CKP+F C+ I
Sbjct: 368 CPLCRNGIVSFIKLPRTKPIAKEITRTSLSLSFCTCSGEAPEPPTLTTPLCKPEFTCSRI 427

Query: 448 SPLGPSSFRTLSCQRFPSMKLNSSLCMGAP--DSSPLVSCDADRRWRNHVVRCPRPNLHR 275
           SPLG +SFR+LSCQRFPS+KLNS+LCMG P   SS LV CD DR  RNHV RC R +  R
Sbjct: 428 SPLG-ASFRSLSCQRFPSVKLNSNLCMGDPHSSSSSLVPCDVDRNMRNHVSRCSRSSGFR 486

Query: 274 SASHSETRRSWFSSLNQYVATSSG 203
             + SE RRSW S+LNQYV T SG
Sbjct: 487 RTA-SEGRRSWLSALNQYVTTGSG 509


>ref|XP_002308433.1| predicted protein [Populus trichocarpa] gi|222854409|gb|EEE91956.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score =  264 bits (675), Expect = 1e-68
 Identities = 127/202 (62%), Positives = 147/202 (72%), Gaps = 2/202 (0%)
 Frame = -3

Query: 802 GCKHGDSLPTCLDPCVVCLEGKCTVAAEGCGHEFCTRCALYLCSTNSTSTISHGPPGSIT 623
           G ++ DSLPTC D CVVCLE KCTVAAEGCGHEFCTRCALYLCST   ST++ GP GS+ 
Sbjct: 307 GWRNNDSLPTCDDTCVVCLETKCTVAAEGCGHEFCTRCALYLCSTICISTVAQGPTGSVA 366

Query: 622 CPLCRHGIVLFVKLPGTNPTVKEIVRSSLSLTMCACSSETTE--PMLTQFCKPDFRCNPI 449
           CPLCRHGIV FVKLPGT P VK I R+SLSL+ C C+ E  +   M T   KPDF+C  I
Sbjct: 367 CPLCRHGIVSFVKLPGTKPVVKAIARTSLSLSFCTCTGEEPDFPSMTTPLRKPDFQCTKI 426

Query: 448 SPLGPSSFRTLSCQRFPSMKLNSSLCMGAPDSSPLVSCDADRRWRNHVVRCPRPNLHRSA 269
           SP  PSSFR+LSCQ+FPSM  N+S CMGA D++PLV C  D   R   VRC R  + RS 
Sbjct: 427 SP--PSSFRSLSCQKFPSMNFNASRCMGASDTTPLVPCTIDLNPREREVRCSRSRIRRST 484

Query: 268 SHSETRRSWFSSLNQYVATSSG 203
           S+ E R+SW S+LNQYV T +G
Sbjct: 485 SNPERRKSWLSALNQYVTTGTG 506


>ref|XP_002533218.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223526975|gb|EEF29171.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 511

 Score =  247 bits (631), Expect = 2e-63
 Identities = 125/205 (60%), Positives = 144/205 (70%), Gaps = 5/205 (2%)
 Frame = -3

Query: 802 GCKHGDSLPTCLDPCVVCLEGKCTVAAEGCGHEFCTRCALYLCSTNSTSTISHGPPGSIT 623
           G ++ +SL TC D CVVCLE  CTVAAEGCGHEFCT CALYLCST  TS  + G PGS+T
Sbjct: 307 GWRNEESLLTCQDTCVVCLERACTVAAEGCGHEFCTWCALYLCSTFCTSNAAQGFPGSVT 366

Query: 622 CPLCRHGIVLFVKLPGTNPTVKEIVRSSLSLTMCACSSETTEP--MLTQFCKPDFRCNPI 449
           CPLCRHGIV F KLPGT P +K I R+SLSL  C CS E  EP  M+T  CKPDF C  I
Sbjct: 367 CPLCRHGIVSFAKLPGTKPMMKAIGRTSLSLAFCTCSGEEPEPTSMITPLCKPDFGCTRI 426

Query: 448 SPLGPSSFRTLSCQRFPSMKLNSSLCMGAPDSSP-LVSCDADRRWRNHVVRCPRPNLHRS 272
           SPL  SSFR+LSCQ+FPSMK N+  CMG PD++P LV    DR    H+VRC R  L RS
Sbjct: 427 SPLS-SSFRSLSCQKFPSMKFNARGCMGTPDTTPSLVPSTIDRNLGKHLVRCSRSRLGRS 485

Query: 271 AS--HSETRRSWFSSLNQYVATSSG 203
            S  ++E RRSW S++NQY    +G
Sbjct: 486 TSNNYTERRRSWLSAINQYTTIGTG 510


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