BLASTX nr result

ID: Coptis25_contig00026437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026437
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280126.2| PREDICTED: ubiquitin-conjugating enzyme E2 5...   263   4e-68
ref|XP_003549634.1| PREDICTED: ubiquitin-conjugating enzyme E2 5...   260   3e-67
ref|XP_002321579.1| predicted protein [Populus trichocarpa] gi|1...   256   4e-66
ref|NP_001237311.1| uncharacterized protein LOC100527526 [Glycin...   254   1e-65
ref|XP_002511435.1| ubiquitin-conjugating enzyme h, putative [Ri...   251   1e-64

>ref|XP_002280126.2| PREDICTED: ubiquitin-conjugating enzyme E2 5-like isoform 1 [Vitis
           vinifera] gi|359491603|ref|XP_003634294.1| PREDICTED:
           ubiquitin-conjugating enzyme E2 5-like isoform 2 [Vitis
           vinifera] gi|297733817|emb|CBI15064.3| unnamed protein
           product [Vitis vinifera]
          Length = 184

 Score =  263 bits (671), Expect = 4e-68
 Identities = 124/155 (80%), Positives = 135/155 (87%)
 Frame = +2

Query: 2   NEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSVGFLNKIFHPNVDELSGSVCLDVI 181
           NEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPS+GF+NKIFHPNVDELSGSVCLDVI
Sbjct: 30  NEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVI 89

Query: 182 NQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDKQQYEQKVKEYCERYAKR 361
           NQSWSPMFDLLNVFEVFLPQLLLYPN SDPLNGDAAS+M+K+K QYE+KVKEYCERYAK+
Sbjct: 90  NQSWSPMFDLLNVFEVFLPQLLLYPNASDPLNGDAASMMMKNKDQYEKKVKEYCERYAKK 149

Query: 362 ENIDNXXXXXXXXXXXXXXXXXASSEDDVAGNADP 466
           ENI N                 ASS++D+AG+ADP
Sbjct: 150 ENITNERLEEDSEDEDFSDGKSASSDEDIAGHADP 184


>ref|XP_003549634.1| PREDICTED: ubiquitin-conjugating enzyme E2 5-like isoform 1
           [Glycine max] gi|356562757|ref|XP_003549635.1|
           PREDICTED: ubiquitin-conjugating enzyme E2 5-like
           isoform 2 [Glycine max]
          Length = 184

 Score =  260 bits (664), Expect = 3e-67
 Identities = 123/155 (79%), Positives = 132/155 (85%)
 Frame = +2

Query: 2   NEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSVGFLNKIFHPNVDELSGSVCLDVI 181
           NEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPS+GF+NKIFHPNVDELSGSVCLDVI
Sbjct: 30  NEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVI 89

Query: 182 NQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDKQQYEQKVKEYCERYAKR 361
           NQSWSPMFDLLNVFEVFLPQLLLYPN SDPLNGDAASLM+KDK+ Y+QKVKEYCERYAK+
Sbjct: 90  NQSWSPMFDLLNVFEVFLPQLLLYPNASDPLNGDAASLMMKDKKLYDQKVKEYCERYAKK 149

Query: 362 ENIDNXXXXXXXXXXXXXXXXXASSEDDVAGNADP 466
           ENI N                  SS+D++ G ADP
Sbjct: 150 ENISNSTAEESGDEEDISEEESGSSDDEIPGRADP 184


>ref|XP_002321579.1| predicted protein [Populus trichocarpa] gi|118487761|gb|ABK95704.1|
           unknown [Populus trichocarpa]
           gi|222868575|gb|EEF05706.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  256 bits (654), Expect = 4e-66
 Identities = 122/157 (77%), Positives = 134/157 (85%), Gaps = 2/157 (1%)
 Frame = +2

Query: 2   NEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSVGFLNKIFHPNVDELSGSVCLDVI 181
           N+FNVEFHGPKESLYEGGVWKI VELPDAYPYKSPS+GF+NKIFHPNVDELSGSVCLDVI
Sbjct: 30  NDFNVEFHGPKESLYEGGVWKIHVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVI 89

Query: 182 NQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDKQQYEQKVKEYCERYAKR 361
           NQSWSPMFDLLNVFEVFLPQLL+YPNPSDPLNGDAASLM+KDK+QY+QKVKEYCERYAK+
Sbjct: 90  NQSWSPMFDLLNVFEVFLPQLLIYPNPSDPLNGDAASLMMKDKEQYDQKVKEYCERYAKK 149

Query: 362 ENIDNXXXXXXXXXXXXXXXXXASS--EDDVAGNADP 466
           E+I N                  SS  ED++AG+ DP
Sbjct: 150 EHIMNSTGEELSDEEDVSDEESGSSDEEDEIAGHVDP 186


>ref|NP_001237311.1| uncharacterized protein LOC100527526 [Glycine max]
           gi|255632544|gb|ACU16622.1| unknown [Glycine max]
          Length = 185

 Score =  254 bits (650), Expect = 1e-65
 Identities = 123/156 (78%), Positives = 132/156 (84%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   NEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSVGFLNKIFHPNVDELSGSVCLDVI 181
           NEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPS+GF+NKIFHPNVDELSGSVCLDVI
Sbjct: 30  NEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVI 89

Query: 182 NQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDKQQYEQKVKEYCERYAKR 361
           NQSWSPMFDLLNVFE FLPQLLLYPN SDPLNGDAASLM+KDK+ Y+QKVKEYCERYAK+
Sbjct: 90  NQSWSPMFDLLNVFEAFLPQLLLYPNASDPLNGDAASLMMKDKELYDQKVKEYCERYAKK 149

Query: 362 ENIDN-XXXXXXXXXXXXXXXXXASSEDDVAGNADP 466
           ENI N                  ASS+D++ G ADP
Sbjct: 150 ENICNSTAGEESGDEEDISEEESASSDDEIPGRADP 185


>ref|XP_002511435.1| ubiquitin-conjugating enzyme h, putative [Ricinus communis]
           gi|223550550|gb|EEF52037.1| ubiquitin-conjugating enzyme
           h, putative [Ricinus communis]
          Length = 184

 Score =  251 bits (642), Expect = 1e-64
 Identities = 118/155 (76%), Positives = 132/155 (85%)
 Frame = +2

Query: 2   NEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSVGFLNKIFHPNVDELSGSVCLDVI 181
           NEFNVEFHGPK SLYEGGVWKIRVELPDAYPYKSPS+GF+NKIFHPNVDELSGSVCLDVI
Sbjct: 30  NEFNVEFHGPKGSLYEGGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVI 89

Query: 182 NQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDKQQYEQKVKEYCERYAKR 361
           NQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLM+KD++QY++KVKEY ++YAK+
Sbjct: 90  NQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDREQYDEKVKEYLDKYAKK 149

Query: 362 ENIDNXXXXXXXXXXXXXXXXXASSEDDVAGNADP 466
            NI N                  SS++D+AG+ DP
Sbjct: 150 GNIMNSTAEEQSEEEDVSDEESGSSDNDIAGHVDP 184


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