BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026433
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   535   e-150
emb|CBI19224.3| unnamed protein product [Vitis vinifera]              489   e-136
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...   462   e-128
ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containi...   451   e-124
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...   451   e-124

>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460-like
            [Vitis vinifera]
          Length = 475

 Score =  535 bits (1379), Expect = e-150
 Identities = 256/364 (70%), Positives = 311/364 (85%)
 Frame = -3

Query: 1093 IMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIPDSSSQKAACIPLLQSYVK 914
            I++WM +QN F+MS ADHAI LELIIK++SLAEAEEYFE++P+SSS+KAAC+PLL +YVK
Sbjct: 65   ILAWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVK 124

Query: 913  ERETGKAEALMLKMQALGYTVNPHPFNEMMKLYDATGQFEKVLYVIQQMKHNRIPRNVLS 734
            ER   KAEALMLK+  LG TV+PHPFNEMMKLY AT QFE+V  VI QMK N+IP NVLS
Sbjct: 125  ERAIEKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLS 184

Query: 733  YNIWMNACSQLSGVAAVETVCREMLNDKSVKVGWSTHSTLANIYINSGLVEKATAALKTA 554
            YN+WM+ACS++SG+A+ E V ++M++DK+V+VGWST STLANIY+ SGL++KA  ALK A
Sbjct: 185  YNLWMSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNA 244

Query: 553  EQMLSMHKRLGYFFLITLYASLGNKDGILRLWEASKAVTGRMTSANYMSILLCLVKIGDI 374
            E+ LS H RLGYFFLIT+YASL NK+ +LRLWEASK V GR+TS NYM ILLCLVK+GDI
Sbjct: 245  EKKLSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDI 304

Query: 373  AEAEKVFRSWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNYKTWEIL 194
            AEAE++FR WES+C KYDIRVSN+LLGAY+R+G +DKAESLHLHTLE+GGCPNYKTWEIL
Sbjct: 305  AEAERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEIL 364

Query: 193  MEGWVKNKEMDKAISAMKKGFSMLKHCDWRPSSTTVMAIAEYFEECGRYEEAQKYVMVLR 14
            MEGW+K++ MDKAI+AMKKGFSMLKHCDWRP+   V AIA Y EE G   +  +YV V+ 
Sbjct: 365  MEGWMKSQNMDKAINAMKKGFSMLKHCDWRPNHGLVTAIARYLEEHGNVNDLNQYVKVIH 424

Query: 13   RLGI 2
            +LG+
Sbjct: 425  QLGV 428


>emb|CBI19224.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  489 bits (1259), Expect = e-136
 Identities = 234/324 (72%), Positives = 285/324 (87%)
 Frame = -3

Query: 1093 IMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIPDSSSQKAACIPLLQSYVK 914
            I++WM +QN F+MS ADHAI LELIIK++SLAEAEEYFE++P+SSS+KAAC+PLL +YVK
Sbjct: 92   ILAWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVK 151

Query: 913  ERETGKAEALMLKMQALGYTVNPHPFNEMMKLYDATGQFEKVLYVIQQMKHNRIPRNVLS 734
            ER   KAEALMLK+  LG TV+PHPFNEMMKLY AT QFE+V  VI QMK N+IP NVLS
Sbjct: 152  ERAIEKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLS 211

Query: 733  YNIWMNACSQLSGVAAVETVCREMLNDKSVKVGWSTHSTLANIYINSGLVEKATAALKTA 554
            YN+WM+ACS++SG+A+ E V ++M++DK+V+VGWST STLANIY+ SGL++KA  ALK A
Sbjct: 212  YNLWMSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNA 271

Query: 553  EQMLSMHKRLGYFFLITLYASLGNKDGILRLWEASKAVTGRMTSANYMSILLCLVKIGDI 374
            E+ LS H RLGYFFLIT+YASL NK+ +LRLWEASK V GR+TS NYM ILLCLVK+GDI
Sbjct: 272  EKKLSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDI 331

Query: 373  AEAEKVFRSWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNYKTWEIL 194
            AEAE++FR WES+C KYDIRVSN+LLGAY+R+G +DKAESLHLHTLE+GGCPNYKTWEIL
Sbjct: 332  AEAERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEIL 391

Query: 193  MEGWVKNKEMDKAISAMKKGFSML 122
            MEGW+K++ MDKAI+AMKKGFS++
Sbjct: 392  MEGWMKSQNMDKAINAMKKGFSII 415


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
            predicted protein [Populus trichocarpa]
          Length = 511

 Score =  462 bits (1188), Expect = e-128
 Identities = 220/366 (60%), Positives = 285/366 (77%), Gaps = 2/366 (0%)
 Frame = -3

Query: 1093 IMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIPDSSSQKAACIPLLQSYVK 914
            I+ WM +QN+FR++   HA+++ELI+KV  L +A EYFE IP S S+KAA +PLL  YVK
Sbjct: 100  ILQWMENQNNFRITPGHHALMMELIVKVNGLNKAGEYFERIPGSGSKKAASLPLLHGYVK 159

Query: 913  ERETGKAEALMLKMQALGYTVNPHPFNEMMKLYDATGQFEKVLYVIQQMKHNRIPRNVLS 734
            ER+  KAE+ M+K+ + G  V PHP+NEMMKLY A  Q+EKV  VI +MK N++ RNVLS
Sbjct: 160  ERDISKAESFMIKLSSSGLLVTPHPYNEMMKLYMALSQYEKVPLVIAEMKRNKLCRNVLS 219

Query: 733  YNIWMNACSQLSGVAAVETVCREMLNDKSVKVGWSTHSTLANIYINSGLVEKATAALKTA 554
            YN+WM A  ++  VA  E V +EM++D++V VGWST ++LAN+YI +G V+KA   LK A
Sbjct: 220  YNLWMGAFGEVFEVAKAEMVYKEMVSDENVGVGWSTLASLANVYIKAGFVDKALLVLKDA 279

Query: 553  EQMLSMHKRLGYFFLITLYASLGNKDGILRLWEASKAVTGRMTSANYMSILLCLVKIGDI 374
            E  LS + RLGYFFLITLY+SL NK+G+LRLWEASKAV GR+  A+YM ++ CLVK+GD+
Sbjct: 280  EMKLSTNGRLGYFFLITLYSSLKNKEGVLRLWEASKAVGGRIPCADYMCVISCLVKVGDL 339

Query: 373  AEAEKVFRSWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNYKTWEIL 194
              AE+VF  WE+ C KYDIRVSN+LLGAYVR+G + KAES HLHT+E+GGCPNYKTWEIL
Sbjct: 340  VAAEQVFAEWETNCFKYDIRVSNVLLGAYVRNGLMGKAESFHLHTVERGGCPNYKTWEIL 399

Query: 193  MEGWVKNKEMDKAISAMKKGFSMLK--HCDWRPSSTTVMAIAEYFEECGRYEEAQKYVMV 20
            MEGWVK+++MDKAI AMKKGFS+LK   CDWRPS + +MAIAE+FE+ G +E+A  Y+  
Sbjct: 400  MEGWVKSQKMDKAIDAMKKGFSVLKVERCDWRPSHSILMAIAEHFEKHGNFEDANHYIKA 459

Query: 19   LRRLGI 2
            +  LG+
Sbjct: 460  VHGLGV 465


>ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460-like
            [Glycine max]
          Length = 496

 Score =  451 bits (1160), Expect = e-124
 Identities = 221/366 (60%), Positives = 283/366 (77%), Gaps = 2/366 (0%)
 Frame = -3

Query: 1093 IMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIPDSSSQKAACIPLLQSYVK 914
            +  W+ +Q +F M  ADHA+ LELII+   L EAEEYF N+PDS+++KAAC+ LL+ YV+
Sbjct: 84   VFEWIKNQKNFHMIPADHAMKLELIIENHGLMEAEEYFMNLPDSAAKKAACLILLRGYVR 143

Query: 913  ERETGKAEALMLKMQALGYTVNPHPFNEMMKLYDATGQFEKVLYVIQQMKHNRIPRNVLS 734
            +R+T KAE  MLK+  LG  V+PHPFNEMMKLY  T ++ KV  VIQQMK N+IP NVLS
Sbjct: 144  DRDTSKAETFMLKLYELGLVVSPHPFNEMMKLYLVTCEYRKVPLVIQQMKRNKIPCNVLS 203

Query: 733  YNIWMNACSQLSG--VAAVETVCREMLNDKSVKVGWSTHSTLANIYINSGLVEKATAALK 560
            YN+WMNACS+  G  VAAVETV R+MLND++V+VGW + +TLAN Y  +G  +KA   LK
Sbjct: 204  YNLWMNACSEEEGYVVAAVETVFRQMLNDRNVEVGWGSLATLANAYKKAGQSKKAILVLK 263

Query: 559  TAEQMLSMHKRLGYFFLITLYASLGNKDGILRLWEASKAVTGRMTSANYMSILLCLVKIG 380
             AE+ LS   RLG+FFLITLYASL +K+G+LRLWEASKAV GR++ ANY+ IL CLVK+G
Sbjct: 264  DAEKKLSTCNRLGHFFLITLYASLKDKEGVLRLWEASKAVRGRISCANYICILTCLVKLG 323

Query: 379  DIAEAEKVFRSWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNYKTWE 200
            DI +A+++F  WES C+KYDIRVSN+LLGAYVR+G +++AESLHLHTL+KGGCPNYKT E
Sbjct: 324  DIVQAKRIFLEWESNCQKYDIRVSNVLLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTLE 383

Query: 199  ILMEGWVKNKEMDKAISAMKKGFSMLKHCDWRPSSTTVMAIAEYFEECGRYEEAQKYVMV 20
            ILMEG+V  ++MD+AI  MK+  +M+K C WRP    V+AIAEY E+ G  E A KY+  
Sbjct: 384  ILMEGYVNWQKMDEAIITMKRALAMMKDCHWRPPHGIVLAIAEYLEKDGNLEYADKYITD 443

Query: 19   LRRLGI 2
            +  LG+
Sbjct: 444  IHNLGL 449


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  451 bits (1160), Expect = e-124
 Identities = 221/365 (60%), Positives = 280/365 (76%), Gaps = 1/365 (0%)
 Frame = -3

Query: 1093 IMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIP-DSSSQKAACIPLLQSYV 917
            I +WM +Q +FRMS +D+A+ LELIIKV  + EAEEYF  IP DS ++KAA   LL  YV
Sbjct: 83   IFTWMETQKNFRMSVSDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAASFALLHGYV 142

Query: 916  KERETGKAEALMLKMQALGYTVNPHPFNEMMKLYDATGQFEKVLYVIQQMKHNRIPRNVL 737
            K ++  KAEALM+K+  LG  VN +PFNEMMKLY AT Q+EKV  VI QMK N+I  N+L
Sbjct: 143  KVKDVVKAEALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRNKIALNLL 202

Query: 736  SYNIWMNACSQLSGVAAVETVCREMLNDKSVKVGWSTHSTLANIYINSGLVEKATAALKT 557
            SYN+WM++  ++S V  VE V +EM+ND +V+VGWST +TLANIY  +G+V+KA  ALK 
Sbjct: 203  SYNLWMSSYGEVSKVVKVELVYKEMVNDDNVEVGWSTLATLANIYTKAGIVDKALLALKN 262

Query: 556  AEQMLSMHKRLGYFFLITLYASLGNKDGILRLWEASKAVTGRMTSANYMSILLCLVKIGD 377
            AE++LS    LGYFFL+T Y+SL NK+G+ RLWEA K V GR+T ANYM +L CLVK+GD
Sbjct: 263  AEKILSTSHLLGYFFLMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCVLSCLVKVGD 322

Query: 376  IAEAEKVFRSWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNYKTWEI 197
            + EAEKVFR WE  CRKYDIRVSN+LLGAYVR G ++KAESLHLHTL++GGCPNYKT EI
Sbjct: 323  LLEAEKVFRDWELNCRKYDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGGCPNYKTLEI 382

Query: 196  LMEGWVKNKEMDKAISAMKKGFSMLKHCDWRPSSTTVMAIAEYFEECGRYEEAQKYVMVL 17
            LMEGWVK+++MDKAI AM +  SML+HC WRPS   +M+IAE+ E    +E+A  ++ V+
Sbjct: 383  LMEGWVKSQKMDKAIDAMTQAISMLEHCHWRPSHGIIMSIAEHLERNRNFEDANHFIQVI 442

Query: 16   RRLGI 2
              LG+
Sbjct: 443  HHLGV 447