BLASTX nr result

ID: Coptis25_contig00026422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026422
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ85964.1| predicted protein [Hordeum vulgare subsp. vulgare]     77   3e-12
ref|XP_002266382.1| PREDICTED: vesicle transport protein USE1 [V...    77   5e-12
emb|CAN68312.1| hypothetical protein VITISV_028548 [Vitis vinifera]    77   5e-12
gb|ACN33259.1| unknown [Zea mays] gi|414869687|tpg|DAA48244.1| T...    77   5e-12
gb|ACN31827.1| unknown [Zea mays] gi|224035821|gb|ACN36986.1| un...    77   5e-12

>dbj|BAJ85964.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 238

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = -1

Query: 750 HIEKHRKLQEDLTDEMVGLARQLKESSLMMNQSLQDTEKAYDS 622
           HIEKHRKLQEDLTDEMV LARQLKESSL+MNQS+QDTEK  DS
Sbjct: 142 HIEKHRKLQEDLTDEMVDLARQLKESSLLMNQSVQDTEKILDS 184



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = -2

Query: 320 KLLDSTEKAVEHSLASTGHANARAMEKYS*SFKTTCFTWLIIF 192
           K+LDSTE+AVEHSLASTG A ARA E YS + KTTCF WL+IF
Sbjct: 180 KILDSTERAVEHSLASTGRATARASEVYSVASKTTCFQWLLIF 222


>ref|XP_002266382.1| PREDICTED: vesicle transport protein USE1 [Vitis vinifera]
           gi|297735435|emb|CBI17875.3| unnamed protein product
           [Vitis vinifera]
          Length = 240

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = -2

Query: 320 KLLDSTEKAVEHSLASTGHANARAMEKYS*SFKTTCFTWLIIF 192
           K+LDSTEKAVEHSLASTGH N RAM+ YS SFKTTCFTW++IF
Sbjct: 182 KILDSTEKAVEHSLASTGHVNTRAMDIYSNSFKTTCFTWIMIF 224



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 35/43 (81%), Positives = 41/43 (95%)
 Frame = -1

Query: 750 HIEKHRKLQEDLTDEMVGLARQLKESSLMMNQSLQDTEKAYDS 622
           HIEKHRKLQEDLTDEMVGLA+QLK+SSL+M+QS+Q+TEK  DS
Sbjct: 144 HIEKHRKLQEDLTDEMVGLAKQLKQSSLLMSQSIQNTEKILDS 186


>emb|CAN68312.1| hypothetical protein VITISV_028548 [Vitis vinifera]
          Length = 240

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = -2

Query: 320 KLLDSTEKAVEHSLASTGHANARAMEKYS*SFKTTCFTWLIIF 192
           K+LDSTEKAVEHSLASTGH N RAM+ YS SFKTTCFTW++IF
Sbjct: 182 KILDSTEKAVEHSLASTGHVNTRAMDIYSNSFKTTCFTWIMIF 224



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 35/43 (81%), Positives = 41/43 (95%)
 Frame = -1

Query: 750 HIEKHRKLQEDLTDEMVGLARQLKESSLMMNQSLQDTEKAYDS 622
           HIEKHRKLQEDLTDEMVGLA+QLK+SSL+M+QS+Q+TEK  DS
Sbjct: 144 HIEKHRKLQEDLTDEMVGLAKQLKQSSLLMSQSIQNTEKILDS 186


>gb|ACN33259.1| unknown [Zea mays] gi|414869687|tpg|DAA48244.1| TPA: hypothetical
           protein ZEAMMB73_873697 [Zea mays]
          Length = 130

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = -1

Query: 750 HIEKHRKLQEDLTDEMVGLARQLKESSLMMNQSLQDTEKAYDS 622
           HIEKHRKLQEDLTDEMV LARQLKESSLMMNQS+Q+TEK  DS
Sbjct: 34  HIEKHRKLQEDLTDEMVELARQLKESSLMMNQSVQETEKILDS 76



 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = -2

Query: 320 KLLDSTEKAVEHSLASTGHANARAMEKYS*SFKTTCFTWLIIF 192
           K+LDSTE+AVEHSLAS GHA +RA E YS + KTTCF WL++F
Sbjct: 72  KILDSTERAVEHSLASAGHATSRAAEVYSLASKTTCFQWLLMF 114


>gb|ACN31827.1| unknown [Zea mays] gi|224035821|gb|ACN36986.1| unknown [Zea mays]
           gi|414869685|tpg|DAA48242.1| TPA: cation cation
           antiporter isoform 1 [Zea mays]
           gi|414869686|tpg|DAA48243.1| TPA: cation cation
           antiporter isoform 2 [Zea mays]
          Length = 236

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = -1

Query: 750 HIEKHRKLQEDLTDEMVGLARQLKESSLMMNQSLQDTEKAYDS 622
           HIEKHRKLQEDLTDEMV LARQLKESSLMMNQS+Q+TEK  DS
Sbjct: 140 HIEKHRKLQEDLTDEMVELARQLKESSLMMNQSVQETEKILDS 182



 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = -2

Query: 320 KLLDSTEKAVEHSLASTGHANARAMEKYS*SFKTTCFTWLIIF 192
           K+LDSTE+AVEHSLAS GHA +RA E YS + KTTCF WL++F
Sbjct: 178 KILDSTERAVEHSLASAGHATSRAAEVYSLASKTTCFQWLLMF 220


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