BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026418
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]   110   1e-22
emb|CBI24272.3| unnamed protein product [Vitis vinifera]               95   5e-18
emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]    59   3e-07
ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258...    57   2e-06

>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/110 (50%), Positives = 75/110 (68%)
 Frame = -1

Query: 330 NVHKMTKNHETNKGCLTESSLVQRNKGVLGNTAAMLHSIDLSNPSECMETYGYIFRNCRK 151
           N+ K+T   +   G  +    V RN GVL N A +L S+DL+NP EC+E Y  I + CRK
Sbjct: 44  NLRKLTNARQRITG-FSGGGSVHRN-GVLNNAAMLLSSMDLTNPDECIEIYASILQKCRK 101

Query: 150 FDNLELGFQVHAHLIVCGVELCVFLSSQLLEFYCKFGRLDDSRRLFDRMS 1
             NL LGFQVHA L+V GV++C FL S+LLE YC+ G ++D+RR+FD+MS
Sbjct: 102 LYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151


>emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/110 (50%), Positives = 75/110 (68%)
 Frame = -1

Query: 330 NVHKMTKNHETNKGCLTESSLVQRNKGVLGNTAAMLHSIDLSNPSECMETYGYIFRNCRK 151
           N+ K+T   +   G  +    V RN GVL N A +L S+DL+NP EC+E Y  I + CRK
Sbjct: 44  NLRKLTNARQRITG-FSGGGSVHRN-GVLNNAAMLLSSMDLTNPDECIEIYASILQKCRK 101

Query: 150 FDNLELGFQVHAHLIVCGVELCVFLSSQLLEFYCKFGRLDDSRRLFDRMS 1
             NL LGFQVHA L+V GV++C FL S+LLE YC+ G ++D+RR+FD+MS
Sbjct: 102 LYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151


>emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/72 (58%), Positives = 56/72 (77%)
 Frame = -1

Query: 216 IDLSNPSECMETYGYIFRNCRKFDNLELGFQVHAHLIVCGVELCVFLSSQLLEFYCKFGR 37
           +DL+NP EC+E Y  I + CRK  NL LGFQVHA L+V GV++C FL S+LLE YC+ G 
Sbjct: 1   MDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC 60

Query: 36  LDDSRRLFDRMS 1
           ++D+RR+FD+MS
Sbjct: 61  VEDARRMFDKMS 72


>emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = -1

Query: 183 TYGYIFRNCRKFDNLELGFQVHAHLIVCGVELCVFLSSQLLEFYCKFGRLDDSRRLFDRM 4
           TY  +F  C     LE G  VHAH+I  G++L  F+ + LL+ Y K G +DD++R+FDR+
Sbjct: 292 TYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL 351


>ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/60 (41%), Positives = 37/60 (61%)
 Frame = -1

Query: 183 TYGYIFRNCRKFDNLELGFQVHAHLIVCGVELCVFLSSQLLEFYCKFGRLDDSRRLFDRM 4
           TY  +   C     LE G  VHAH+I  G++L  F+ + LL+ Y K G +DD++R+FDR+
Sbjct: 292 TYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL 351