BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026398
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]                65   4e-09
emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]    62   5e-08
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...    57   2e-06
emb|CAN83343.1| hypothetical protein VITISV_042274 [Vitis vinifera]    57   2e-06
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]    57   2e-06

>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
 Frame = -1

Query: 299  IEKYGYSDSKHTLTPFVANIHLMKNNLFVFSHTKYVNIIGSLLYLMNYI-CEI*HCLH*W 123
            ++K+GY D K   TP+ AN  L KN     S T+Y  IIGSLL+LM++   +I + +   
Sbjct: 1025 LKKFGYYDFKSVSTPYDANSKLKKNRGESISQTQYAQIIGSLLHLMSFSRPDIAYAV--G 1082

Query: 122  HTELITHCSYRKHWMYIVSLSKYYSGAIDYGLIFSRFPSL 3
                 T C  + HW  +  L KY  G +DY + +S FP++
Sbjct: 1083 RLSRCTQCPSQDHWEALARLMKYLRGTMDYAIEYSGFPAV 1122


>emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]
          Length = 1096

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/99 (35%), Positives = 47/99 (47%)
 Frame = -1

Query: 299  IEKYGYSDSKHTLTPFVANIHLMKNNLFVFSHTKYVNIIGSLLYLMNYICEI*HCLH*WH 120
            + K+ + D K   TP+  N  L KN     +  +Y  IIGSL+YLMNY            
Sbjct: 844  LRKFEHFDCKPVSTPYDPNSQLKKNREHSVAQIEYAQIIGSLMYLMNY------------ 891

Query: 119  TELITHCSYRKHWMYIVSLSKYYSGAIDYGLIFSRFPSL 3
                   +Y  HW  +  + KY  G I+YGL FS FPS+
Sbjct: 892  --TRPDIAYADHWTVVRRVLKYLRGTINYGLCFSGFPSV 928


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = -1

Query: 260  TPFVANIHLMKNNLFVFSHTKYVNIIGSLLYLMNYI-CEI*HCLH*WHTELITHCSYRKH 84
            TPF A+ HL KN     S  +Y  IIGS++YLMNY   +I + +        TH   R H
Sbjct: 882  TPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVS--RLSRYTHNPNRYH 939

Query: 83   WMYIVSLSKYYSGAIDYGLIFSRFP 9
            W  +  L +Y  G IDY L F++FP
Sbjct: 940  WDALRHLLRYLKGTIDYCLHFNKFP 964


>emb|CAN83343.1| hypothetical protein VITISV_042274 [Vitis vinifera]
          Length = 229

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
 Frame = -1

Query: 299 IEKYGYSDSKHTLTPFVANIHLMKNNLFVFSHTKYVNIIGSLLYLMNYI-CEI*HCLH*W 123
           + K+ + D K   TP+  N  L KN     +  +Y  IIGSL+YLMN I  +I + +   
Sbjct: 71  LRKFEHFDCKPVSTPYNPNSQLKKNREHSVAQIEYAQIIGSLMYLMNCIRPDIAYAV--G 128

Query: 122 HTELITHCSYRKHWMYIVSLSKYYSGAIDYGLIFSRFPSL 3
                T  S + HW  +  + KY    I+YGL +S FPS+
Sbjct: 129 KLSQYTQSSNQDHWTVVRRVLKYLRDTINYGLYYSGFPSV 168


>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
          Length = 839

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = -1

Query: 350  THIGLFILF*HVLEIFFIEKYGYSDSKHTLTPFVANIHLMKNNLFVFSHTKYVNIIGSLL 171
            T  GL +   H +E   ++++   D     TP   N+H  KNN       +Y  IIGSL+
Sbjct: 668  TSSGLILSQCHYIEKI-LKRFNQYDDSPIKTPVDLNLHSTKNNGPAIDQLEYSRIIGSLM 726

Query: 170  YLMNYIC-EI*HCLH*WHTELITHCSYRKHWMYIVSLSKYYSGAIDYGLIFSRFPSL 3
            Y+MN +C +I + ++       T+   + HW  +V + +Y    ++YGL + R+P+L
Sbjct: 727  YVMNCMCLDIAYAVN--KLSRFTNNMGKDHWKVLVRVLRYLRYTLNYGLHYLRYPTL 781