BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026393
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containi...    65   3e-10
emb|CBI32698.3| unnamed protein product [Vitis vinifera]               65   3e-10
ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containi...    59   3e-08
ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-07
dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   5e-07

>ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score = 65.1 bits (157), Expect(2) = 3e-10
 Identities = 30/48 (62%), Positives = 40/48 (83%)
 Frame = +2

Query: 83  KHAADSVWKLDPSDSASHVLLGNILASTGNWGEVARVRRLMQSRGVRR 226
           K AA+++ K+DPS+SA+HVLL NI AS GNW +VAR+R LM+ RGVR+
Sbjct: 658 KRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRK 705



 Score = 24.3 bits (51), Expect(2) = 3e-10
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +1

Query: 223 EVPGQSWIEV 252
           +VPGQSWIEV
Sbjct: 705 KVPGQSWIEV 714


>emb|CBI32698.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score = 65.1 bits (157), Expect(2) = 3e-10
 Identities = 30/48 (62%), Positives = 40/48 (83%)
 Frame = +2

Query: 83  KHAADSVWKLDPSDSASHVLLGNILASTGNWGEVARVRRLMQSRGVRR 226
           K AA+++ K+DPS+SA+HVLL NI AS GNW +VAR+R LM+ RGVR+
Sbjct: 396 KRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRK 443



 Score = 24.3 bits (51), Expect(2) = 3e-10
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +1

Query: 223 EVPGQSWIEV 252
           +VPGQSWIEV
Sbjct: 443 KVPGQSWIEV 452


>ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score = 58.5 bits (140), Expect(2) = 3e-08
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = +2

Query: 83  KHAADSVWKLDPSDSASHVLLGNILASTGNWGEVARVRRLMQSRGVRR 226
           + AA+++ KLDPS+SA+ VLL NI AS GNW EVAR+R LM+  GV++
Sbjct: 674 ERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQK 721



 Score = 24.3 bits (51), Expect(2) = 3e-08
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +1

Query: 223 EVPGQSWIEV 252
           +VPGQSWIEV
Sbjct: 721 KVPGQSWIEV 730


>ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score = 58.5 bits (140), Expect(2) = 1e-07
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = +2

Query: 83  KHAADSVWKLDPSDSASHVLLGNILASTGNWGEVARVRRLMQSRGVRR 226
           + AA+++ KLDPS+SA+ VLL NI AS GNW EVAR+R LM+  GV++
Sbjct: 752 ERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQK 799



 Score = 21.9 bits (45), Expect(2) = 1e-07
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 223 EVPGQSWIEV 252
           +VPGQSWI V
Sbjct: 799 KVPGQSWIAV 808


>dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 514

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/48 (47%), Positives = 36/48 (75%)
 Frame = +2

Query: 83  KHAADSVWKLDPSDSASHVLLGNILASTGNWGEVARVRRLMQSRGVRR 226
           +HAA  VW+LDP+D+  +V+L N+ +  G WG+VARVR  M++RG+ +
Sbjct: 331 EHAAAMVWRLDPTDAVPYVMLSNLYSRAGRWGDVARVRTSMKARGITK 378