BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026383
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi...   140   2e-31
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]   140   2e-31
emb|CBI16890.3| unnamed protein product [Vitis vinifera]              140   3e-31
ref|XP_002532893.1| pentatricopeptide repeat-containing protein,...   127   2e-27
ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|2...   127   3e-27

>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  140 bits (354), Expect = 2e-31
 Identities = 70/109 (64%), Positives = 86/109 (78%)
 Frame = -1

Query: 710 LIRRFCKGENIVYAQKIFTLMQGKGILGDSVVYTNLAYAYFKAGKLTLASEMLDDMTKRY 531
           LIRR CK + I  A++IFTLMQGKG+ GDSVVYT+LAYAYFKAGK   AS+MLD+M KR 
Sbjct: 481 LIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRR 540

Query: 530 LMITVKIYKSLNASFANDSDILRLFWGHVVERGLITKKVLNLMRQLD*N 384
           LMIT+KIY+  +AS+A D  IL LFW HV+ER LI+K +L  ++QLD N
Sbjct: 541 LMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNILKYIQQLDVN 589


>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  140 bits (354), Expect = 2e-31
 Identities = 70/109 (64%), Positives = 86/109 (78%)
 Frame = -1

Query: 710 LIRRFCKGENIVYAQKIFTLMQGKGILGDSVVYTNLAYAYFKAGKLTLASEMLDDMTKRY 531
           LIRR CK + I  A++IFTLMQGKG+ GDSVVYT+LAYAYFKAGK   AS+MLD+M KR 
Sbjct: 481 LIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRR 540

Query: 530 LMITVKIYKSLNASFANDSDILRLFWGHVVERGLITKKVLNLMRQLD*N 384
           LMIT+KIY+  +AS+A D  IL LFW HV+ER LI+K +L  ++QLD N
Sbjct: 541 LMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNILKYIQQLDVN 589


>emb|CBI16890.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  140 bits (352), Expect = 3e-31
 Identities = 69/107 (64%), Positives = 85/107 (79%)
 Frame = -1

Query: 710 LIRRFCKGENIVYAQKIFTLMQGKGILGDSVVYTNLAYAYFKAGKLTLASEMLDDMTKRY 531
           LIRR CK + I  A++IFTLMQGKG+ GDSVVYT+LAYAYFKAGK   AS+MLD+M KR 
Sbjct: 474 LIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRR 533

Query: 530 LMITVKIYKSLNASFANDSDILRLFWGHVVERGLITKKVLNLMRQLD 390
           LMIT+KIY+  +AS+A D  IL LFW HV+ER LI+K +L  ++QLD
Sbjct: 534 LMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNILKYIQQLD 580


>ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527353|gb|EEF29498.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 625

 Score =  127 bits (320), Expect = 2e-27
 Identities = 61/90 (67%), Positives = 75/90 (83%)
 Frame = -1

Query: 710 LIRRFCKGENIVYAQKIFTLMQGKGILGDSVVYTNLAYAYFKAGKLTLASEMLDDMTKRY 531
           LIRRFCK E + YA+KIF+LMQ KG LGDSV+YT+LAYAY+K GK   AS++LD+M KR 
Sbjct: 484 LIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRR 543

Query: 530 LMITVKIYKSLNASFANDSDILRLFWGHVV 441
           LMIT+KIY++LNAS+A D+ IL LFW HVV
Sbjct: 544 LMITLKIYRALNASYAGDNSILSLFWNHVV 573


>ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|222870764|gb|EEF07895.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score =  127 bits (318), Expect = 3e-27
 Identities = 61/104 (58%), Positives = 82/104 (78%)
 Frame = -1

Query: 710 LIRRFCKGENIVYAQKIFTLMQGKGILGDSVVYTNLAYAYFKAGKLTLASEMLDDMTKRY 531
           LIRRFCK E I  AQ++  LM+ KGI GDSVVYT+LAY Y+K GK+ + S++LD+M K+ 
Sbjct: 490 LIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVNVTSDILDEMYKKR 549

Query: 530 LMITVKIYKSLNASFANDSDILRLFWGHVVERGLITKKVLNLMR 399
           LMIT+KIY+S NAS+A+D+ IL LFW HV+ER L++K +L  M+
Sbjct: 550 LMITLKIYRSFNASYASDNSILSLFWNHVLERRLMSKNILKDMQ 593