BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026375
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    63   2e-08
ref|XP_003595849.1| hypothetical protein MTR_2g062550 [Medicago ...    61   1e-07
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    56   4e-06
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    55   6e-06
gb|ABN08954.1| Ribonuclease H [Medicago truncatula]                    55   6e-06

>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -3

Query: 220 GVIFRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAVLAF 41
           G +FR  NA  L   A  +G  ++Y  E  AI+ V E+A  +NW+ +W+E DS   V+AF
Sbjct: 249 GGVFRDQNANFLSCFAKNLGGGSAYQPELAAIMRVVEIAYQRNWRNIWIESDSALVVMAF 308

Query: 40  RK-GTIPWKLQARW 2
           +K   IP +L+ RW
Sbjct: 309 KKMSMIPCRLRNRW 322


>ref|XP_003595849.1| hypothetical protein MTR_2g062550 [Medicago truncatula]
           gi|355484897|gb|AES66100.1| hypothetical protein
           MTR_2g062550 [Medicago truncatula]
          Length = 315

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = -3

Query: 211 FRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAVLAFRK- 35
           FR Y    LG  +  +G+ T ++AE T ++L  E A   NW +LWVE DS SAVLAF+  
Sbjct: 246 FRDYTGAFLGGFSSNLGLGTVFEAELTGLMLAIEYAASHNWSRLWVESDSSSAVLAFKNH 305

Query: 34  GTIPWKLQAR 5
             IP + + R
Sbjct: 306 SAIPIRFRNR 315


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
 Frame = -3

Query: 235  GYGGAGVIFRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKS 56
            G    G +FR  +   LG  +  +G+ + + AE  A +L  E A    W+ LW+E DS S
Sbjct: 1034 GLAACGGLFRDSSGSFLGAFSCNIGLASVFHAETLAFILALEHAAHHGWRNLWLESDSTS 1093

Query: 55   AVLAFRKGT-IPWKLQARW 2
            A++ F   + + W L+ RW
Sbjct: 1094 ALMIFSNSSLVQWLLRNRW 1112


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -3

Query: 229 GGAGVIFRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAV 50
           G  GVIFR       G  A  +G  T+ +AE +A +   E A   +   +W+E DS + +
Sbjct: 268 GSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKELHLTNIWIETDSVNVI 327

Query: 49  LAFRKGT-IPWKLQARW 2
            AF   T +PWK+  RW
Sbjct: 328 RAFHFNTGVPWKMHIRW 344


>gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
          Length = 175

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -3

Query: 229 GGAGVIFRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAV 50
           G  G +FR +    LG  A  +G  T + AE  A +   E +   N + +W+E DSK  V
Sbjct: 26  GATGGVFRNWQTHSLGGFAQNIGHATCFKAELCAAIFAIEKSIEYNLRDIWLETDSKLVV 85

Query: 49  LAFRKGT-IPWKLQARW 2
            AF     +PW+L+ RW
Sbjct: 86  KAFSSSEHVPWQLRTRW 102