BLASTX nr result
ID: Coptis25_contig00026375
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00026375 (255 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g... 63 2e-08 ref|XP_003595849.1| hypothetical protein MTR_2g062550 [Medicago ... 61 1e-07 gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 56 4e-06 gb|ABD28730.1| Ribonuclease H [Medicago truncatula] 55 6e-06 gb|ABN08954.1| Ribonuclease H [Medicago truncatula] 55 6e-06 >ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] gi|355506707|gb|AES87849.1| GDSL esterase/lipase [Medicago truncatula] Length = 1004 Score = 63.2 bits (152), Expect = 2e-08 Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = -3 Query: 220 GVIFRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAVLAF 41 G +FR NA L A +G ++Y E AI+ V E+A +NW+ +W+E DS V+AF Sbjct: 249 GGVFRDQNANFLSCFAKNLGGGSAYQPELAAIMRVVEIAYQRNWRNIWIESDSALVVMAF 308 Query: 40 RK-GTIPWKLQARW 2 +K IP +L+ RW Sbjct: 309 KKMSMIPCRLRNRW 322 >ref|XP_003595849.1| hypothetical protein MTR_2g062550 [Medicago truncatula] gi|355484897|gb|AES66100.1| hypothetical protein MTR_2g062550 [Medicago truncatula] Length = 315 Score = 60.8 bits (146), Expect = 1e-07 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Frame = -3 Query: 211 FRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAVLAFRK- 35 FR Y LG + +G+ T ++AE T ++L E A NW +LWVE DS SAVLAF+ Sbjct: 246 FRDYTGAFLGGFSSNLGLGTVFEAELTGLMLAIEYAASHNWSRLWVESDSSSAVLAFKNH 305 Query: 34 GTIPWKLQAR 5 IP + + R Sbjct: 306 SAIPIRFRNR 315 >gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H; Endonuclease/exonuclease/phosphatase [Medicago truncatula] Length = 1246 Score = 55.8 bits (133), Expect = 4e-06 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Frame = -3 Query: 235 GYGGAGVIFRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKS 56 G G +FR + LG + +G+ + + AE A +L E A W+ LW+E DS S Sbjct: 1034 GLAACGGLFRDSSGSFLGAFSCNIGLASVFHAETLAFILALEHAAHHGWRNLWLESDSTS 1093 Query: 55 AVLAFRKGT-IPWKLQARW 2 A++ F + + W L+ RW Sbjct: 1094 ALMIFSNSSLVQWLLRNRW 1112 >gb|ABD28730.1| Ribonuclease H [Medicago truncatula] Length = 409 Score = 55.1 bits (131), Expect = 6e-06 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Frame = -3 Query: 229 GGAGVIFRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAV 50 G GVIFR G A +G T+ +AE +A + E A + +W+E DS + + Sbjct: 268 GSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKELHLTNIWIETDSVNVI 327 Query: 49 LAFRKGT-IPWKLQARW 2 AF T +PWK+ RW Sbjct: 328 RAFHFNTGVPWKMHIRW 344 >gb|ABN08954.1| Ribonuclease H [Medicago truncatula] Length = 175 Score = 55.1 bits (131), Expect = 6e-06 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Frame = -3 Query: 229 GGAGVIFRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAV 50 G G +FR + LG A +G T + AE A + E + N + +W+E DSK V Sbjct: 26 GATGGVFRNWQTHSLGGFAQNIGHATCFKAELCAAIFAIEKSIEYNLRDIWLETDSKLVV 85 Query: 49 LAFRKGT-IPWKLQARW 2 AF +PW+L+ RW Sbjct: 86 KAFSSSEHVPWQLRTRW 102