BLASTX nr result

ID: Coptis25_contig00026366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026366
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264943.1| PREDICTED: uncharacterized aarF domain-conta...    98   1e-18
ref|XP_003548083.1| PREDICTED: uncharacterized aarF domain-conta...    96   5e-18
ref|XP_002527120.1| Protein ABC1, mitochondrial precursor, putat...    96   5e-18
emb|CBI29334.3| unnamed protein product [Vitis vinifera]               96   6e-18
ref|XP_002300887.1| predicted protein [Populus trichocarpa] gi|2...    89   8e-16

>ref|XP_002264943.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           At1g71810, chloroplastic-like [Vitis vinifera]
          Length = 713

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 64/156 (41%), Positives = 83/156 (53%), Gaps = 6/156 (3%)
 Frame = +1

Query: 64  VFYQEGVFRVDXXXXXXXXXXRVKTEKS--SGGSADRDSRLVIKQTLTFILTEKGTFVRE 237
           + Y+EGVFR+D          R +TE++  +      DSRLV+KQ L+F LTEKGTFVRE
Sbjct: 511 LLYKEGVFRIDRLESLLSESLRARTERALVTKQMEGTDSRLVVKQILSFTLTEKGTFVRE 570

Query: 238 ILLQELAKGFDALGLAT----TSAVISRVPFAAPTSSSLMSAEDIVNXXXXXXXXXXXXX 405
           +LL+E AKG DALGLAT    TS   + +PF+A    S M+ +DI N             
Sbjct: 571 MLLEEFAKGLDALGLATLDSITSVTATTLPFSASRPFSSMTDDDINNLRTLRRLLLLLSG 630

Query: 406 XQKSENSSNVSCHCVLNSHGEKTHNPFGFSFDLLQS 513
            QK+E+SS V     L   G K       +F  L S
Sbjct: 631 PQKTESSSKVRAFNCLIYKGVKDSEEVSLAFYQLAS 666


>ref|XP_003548083.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           At1g71810, chloroplastic-like [Glycine max]
          Length = 693

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
 Frame = +1

Query: 64  VFYQEGVFRVDXXXXXXXXXXRVKTEKSSGGSAD-RDSRLVIKQTLTFILTEKGTFVREI 240
           + Y++GVFR+D          R KTEK+     +  DS +V+K+ L+F LTEKG FVREI
Sbjct: 500 LLYKDGVFRIDRLESLVTESLRAKTEKAIVKQTEGTDSTMVMKEILSFTLTEKGEFVREI 559

Query: 241 LLQELAKGFDALGLATTSAVISRVPFAAPTSSSLMSAEDIVNXXXXXXXXXXXXXXQKSE 420
           ++QE AKG DALGLAT     +RVPF++   S LM+ EDI+N              ++ E
Sbjct: 560 IVQEFAKGLDALGLATMETAAARVPFSSFFYSPLMTKEDIINLRNFRRLMLLLLGARRKE 619

Query: 421 NSSNVS 438
            SS  S
Sbjct: 620 ESSTAS 625


>ref|XP_002527120.1| Protein ABC1, mitochondrial precursor, putative [Ricinus communis]
           gi|223533543|gb|EEF35283.1| Protein ABC1, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 711

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 6/128 (4%)
 Frame = +1

Query: 64  VFYQEGVFRVDXXXXXXXXXXRVKTEKS--SGGSADRDSRLVIKQTLTFILTEKGTFVRE 237
           + Y+EGVFR+D          R +TE++     + D  S++ IK+ L+F LTEKGTFVRE
Sbjct: 509 LLYKEGVFRIDRLESLLSESLRARTERALVKRQTEDAVSKVAIKEILSFTLTEKGTFVRE 568

Query: 238 ILLQELAKGFDALGLAT----TSAVISRVPFAAPTSSSLMSAEDIVNXXXXXXXXXXXXX 405
           ILLQE+AKG DALG+AT    TS   + +PF+ P SSS M+ ED+VN             
Sbjct: 569 ILLQEVAKGLDALGVATLDSLTSVATASIPFSTPFSSSSMTEEDMVNLRTLKRLVLLLSG 628

Query: 406 XQKSENSS 429
            QK+ +S+
Sbjct: 629 SQKNGSSA 636


>emb|CBI29334.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 58/130 (44%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
 Frame = +1

Query: 64  VFYQEGVFRVDXXXXXXXXXXRVKTEKS--SGGSADRDSRLVIKQTLTFILTEKGTFVRE 237
           + Y+EGVFR+D          R +TE++  +      DSRLV+KQ L+F LTEKGTFVRE
Sbjct: 511 LLYKEGVFRIDRLESLLSESLRARTERALVTKQMEGTDSRLVVKQILSFTLTEKGTFVRE 570

Query: 238 ILLQELAKGFDALGLAT----TSAVISRVPFAAPTSSSLMSAEDIVNXXXXXXXXXXXXX 405
           +LL+E AKG DALGLAT    TS   + +PF+A    S M+ +DI N             
Sbjct: 571 MLLEEFAKGLDALGLATLDSITSVTATTLPFSASRPFSSMTDDDINNLRTLRRLLLLLSG 630

Query: 406 XQKSENSSNV 435
            QK+E+SS V
Sbjct: 631 PQKTESSSKV 640


>ref|XP_002300887.1| predicted protein [Populus trichocarpa] gi|222842613|gb|EEE80160.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 63/146 (43%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
 Frame = +1

Query: 64  VFYQEGVFRVDXXXXXXXXXXRVKTEKSSGGSA--DRDSRLVIKQTLTFILTEKGTFVRE 237
           + Y++GVFR+D          R +TEK+   S   D DS++ +KQ L+F LTEKG FVRE
Sbjct: 503 LLYEKGVFRIDRLESLLSESLRARTEKALVKSQLEDNDSKVAVKQILSFTLTEKGAFVRE 562

Query: 238 ILLQELAK--GFDALGLAT----TSAVISRVPFAAPTSSSLMSAEDIVNXXXXXXXXXXX 399
           ILLQE+AK  G DA GLAT    TS   + +PFAA +SSS M+ ED++N           
Sbjct: 563 ILLQEIAKASGLDAFGLATLDYLTSMANTSIPFAASSSSS-MTEEDMMNLRTFRRLMLIL 621

Query: 400 XXXQKSENSSNV-SC-HCVLNSHGEK 471
              QK+  S  V SC +   N H E+
Sbjct: 622 SGFQKNGGSPVVRSCAYFNQNMHSEE 647


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