BLASTX nr result
ID: Coptis25_contig00026363
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00026363 (974 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634742.1| PREDICTED: LOW QUALITY PROTEIN: proteasome a... 522 e-146 emb|CBI39809.3| unnamed protein product [Vitis vinifera] 522 e-146 ref|XP_004148265.1| PREDICTED: LOW QUALITY PROTEIN: proteasome a... 488 e-136 ref|XP_002300584.1| predicted protein [Populus trichocarpa] gi|2... 475 e-132 ref|NP_187941.6| proteasome activator subunit 4 [Arabidopsis tha... 459 e-127 >ref|XP_003634742.1| PREDICTED: LOW QUALITY PROTEIN: proteasome activator complex subunit 4-like [Vitis vinifera] Length = 1813 Score = 522 bits (1344), Expect = e-146 Identities = 245/307 (79%), Positives = 271/307 (88%) Frame = +2 Query: 53 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVIDLF 232 MH+YNAWLP PV E TK EKE+F VV +VK +W P E ESVY TLKWISVIDLF Sbjct: 1 MHLYNAWLPPPVAEATKGEKEAFGRVVAAVKEAWRP-----EDPESVYSTLKWISVIDLF 55 Query: 233 IKAKSEIGLEDVGELVEFGLEVFHASHNRLYAQVRWGNILVKLLNKYGKKLSLKLQWRPF 412 IKAKSE+ LEDVG L E GLE+FH SHN+LYAQVRWGNILV+LLNKY KKL+LK+QWRPF Sbjct: 56 IKAKSEVCLEDVGALTEIGLELFHKSHNKLYAQVRWGNILVRLLNKYRKKLALKVQWRPF 115 Query: 413 YDCLVNTHFTRNTGPEGWRLRQRHFETLTSLVRSCRKFFSTGSAFEIWSEFRSLLENPWH 592 YD L+ THFTRNTGPEGWRLRQRHFET+TSLVRSCR+FF GSAFEIWSEF+SLLENPWH Sbjct: 116 YDTLIQTHFTRNTGPEGWRLRQRHFETVTSLVRSCRRFFPPGSAFEIWSEFKSLLENPWH 175 Query: 593 NSSFEGAGFVRLFLPTNLDNRDFFSHDWIRQCIDQWNLIPNCQFWDSQWAAVISRCIKNY 772 NSSFEG+GFVRLFLPTNLDN+DFFSHDWI++C+DQW IPNCQFW+SQWAAVI+R IKNY Sbjct: 176 NSSFEGSGFVRLFLPTNLDNQDFFSHDWIKECLDQWASIPNCQFWNSQWAAVIARVIKNY 235 Query: 773 HFIDWETFLPVLFTRYLNMFEVPVANSHASYPFTVDVPGNTRFLFSNKAVTPEKSIAKSI 952 +FIDWE FLPVLFTRYLNMFEVPVAN + SYPF+VDVP NTRFLFSNKAVTP K+IAKS+ Sbjct: 236 NFIDWECFLPVLFTRYLNMFEVPVANGNGSYPFSVDVPRNTRFLFSNKAVTPAKAIAKSV 295 Query: 953 VYLLKPG 973 VYLLK G Sbjct: 296 VYLLKVG 302 >emb|CBI39809.3| unnamed protein product [Vitis vinifera] Length = 1808 Score = 522 bits (1344), Expect = e-146 Identities = 245/307 (79%), Positives = 271/307 (88%) Frame = +2 Query: 53 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVIDLF 232 MH+YNAWLP PV E TK EKE+F VV +VK +W P E ESVY TLKWISVIDLF Sbjct: 1 MHLYNAWLPPPVAEATKGEKEAFGRVVAAVKEAWRP-----EDPESVYSTLKWISVIDLF 55 Query: 233 IKAKSEIGLEDVGELVEFGLEVFHASHNRLYAQVRWGNILVKLLNKYGKKLSLKLQWRPF 412 IKAKSE+ LEDVG L E GLE+FH SHN+LYAQVRWGNILV+LLNKY KKL+LK+QWRPF Sbjct: 56 IKAKSEVCLEDVGALTEIGLELFHKSHNKLYAQVRWGNILVRLLNKYRKKLALKVQWRPF 115 Query: 413 YDCLVNTHFTRNTGPEGWRLRQRHFETLTSLVRSCRKFFSTGSAFEIWSEFRSLLENPWH 592 YD L+ THFTRNTGPEGWRLRQRHFET+TSLVRSCR+FF GSAFEIWSEF+SLLENPWH Sbjct: 116 YDTLIQTHFTRNTGPEGWRLRQRHFETVTSLVRSCRRFFPPGSAFEIWSEFKSLLENPWH 175 Query: 593 NSSFEGAGFVRLFLPTNLDNRDFFSHDWIRQCIDQWNLIPNCQFWDSQWAAVISRCIKNY 772 NSSFEG+GFVRLFLPTNLDN+DFFSHDWI++C+DQW IPNCQFW+SQWAAVI+R IKNY Sbjct: 176 NSSFEGSGFVRLFLPTNLDNQDFFSHDWIKECLDQWASIPNCQFWNSQWAAVIARVIKNY 235 Query: 773 HFIDWETFLPVLFTRYLNMFEVPVANSHASYPFTVDVPGNTRFLFSNKAVTPEKSIAKSI 952 +FIDWE FLPVLFTRYLNMFEVPVAN + SYPF+VDVP NTRFLFSNKAVTP K+IAKS+ Sbjct: 236 NFIDWECFLPVLFTRYLNMFEVPVANGNGSYPFSVDVPRNTRFLFSNKAVTPAKAIAKSV 295 Query: 953 VYLLKPG 973 VYLLK G Sbjct: 296 VYLLKVG 302 >ref|XP_004148265.1| PREDICTED: LOW QUALITY PROTEIN: proteasome activator complex subunit 4-like [Cucumis sativus] Length = 1809 Score = 488 bits (1257), Expect = e-136 Identities = 226/307 (73%), Positives = 265/307 (86%) Frame = +2 Query: 53 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVIDLF 232 MH+YNAWLP PV ET +EKESF VV S+K+S+ P DD++ SVY TLKW+SVIDLF Sbjct: 1 MHLYNAWLPPPVALETTKEKESFALVVNSLKDSYRP--DDLD---SVYSTLKWVSVIDLF 55 Query: 233 IKAKSEIGLEDVGELVEFGLEVFHASHNRLYAQVRWGNILVKLLNKYGKKLSLKLQWRPF 412 IKAKSE+ LEDV +V+ GLE+FH S ++LYAQVRWGNILV++LNKY K+LSLK+QWRP Sbjct: 56 IKAKSEVSLEDVAAIVDIGLELFHMSQDKLYAQVRWGNILVRILNKYSKRLSLKVQWRPL 115 Query: 413 YDCLVNTHFTRNTGPEGWRLRQRHFETLTSLVRSCRKFFSTGSAFEIWSEFRSLLENPWH 592 Y+ LV+THFTRNTGPEGWRLRQRHFE +TSLVRSCR+FF GSA +IW+EFRS+L+NPWH Sbjct: 116 YNTLVHTHFTRNTGPEGWRLRQRHFEAITSLVRSCRRFFPAGSAADIWAEFRSMLDNPWH 175 Query: 593 NSSFEGAGFVRLFLPTNLDNRDFFSHDWIRQCIDQWNLIPNCQFWDSQWAAVISRCIKNY 772 NSSFEG+GFVRLFLPTNLDN+DFFSH+WI +C+ W+ IPNCQFW+SQWAA+I+R +KNY Sbjct: 176 NSSFEGSGFVRLFLPTNLDNQDFFSHNWIEECMKYWDSIPNCQFWNSQWAAIIARVVKNY 235 Query: 773 HFIDWETFLPVLFTRYLNMFEVPVANSHASYPFTVDVPGNTRFLFSNKAVTPEKSIAKSI 952 FIDWE FLP LFTR+LNMFEVPVAN SYPF+VDVP NTRFLFSNK TP K+IAKSI Sbjct: 236 SFIDWECFLPTLFTRFLNMFEVPVANGSGSYPFSVDVPRNTRFLFSNKMGTPSKAIAKSI 295 Query: 953 VYLLKPG 973 VYLLKPG Sbjct: 296 VYLLKPG 302 >ref|XP_002300584.1| predicted protein [Populus trichocarpa] gi|222847842|gb|EEE85389.1| predicted protein [Populus trichocarpa] Length = 872 Score = 475 bits (1222), Expect = e-132 Identities = 217/307 (70%), Positives = 263/307 (85%) Frame = +2 Query: 53 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVIDLF 232 MH+YNAWLP PV EETK+EK+SF V+ SVK+S+ P D SVY TLKW+SV++LF Sbjct: 1 MHLYNAWLPPPVAEETKKEKDSFRRVLNSVKDSYKPDDPD-----SVYSTLKWVSVLELF 55 Query: 233 IKAKSEIGLEDVGELVEFGLEVFHASHNRLYAQVRWGNILVKLLNKYGKKLSLKLQWRPF 412 IKAKSE+ LEDV ELV+ G+E+F+ S N+LYAQVRWGN+LV++LNKY KKL+ K+QWRP Sbjct: 56 IKAKSELNLEDVAELVQIGIELFNISQNKLYAQVRWGNLLVRVLNKYRKKLAFKVQWRPL 115 Query: 413 YDCLVNTHFTRNTGPEGWRLRQRHFETLTSLVRSCRKFFSTGSAFEIWSEFRSLLENPWH 592 YD L++THF+RNTGPEGWRLRQRHF+T+TSLVRSCR+FF GSA EIW+EF SLLENPWH Sbjct: 116 YDTLIHTHFSRNTGPEGWRLRQRHFQTITSLVRSCRRFFPVGSALEIWNEFSSLLENPWH 175 Query: 593 NSSFEGAGFVRLFLPTNLDNRDFFSHDWIRQCIDQWNLIPNCQFWDSQWAAVISRCIKNY 772 NS+FEG+GFVRLFLPTNL+N+DF++ W+++ +D W+ IPN QFW++QWAAVI+R IKNY Sbjct: 176 NSAFEGSGFVRLFLPTNLENQDFYTDAWVKKSLDSWDSIPNSQFWNNQWAAVIARVIKNY 235 Query: 773 HFIDWETFLPVLFTRYLNMFEVPVANSHASYPFTVDVPGNTRFLFSNKAVTPEKSIAKSI 952 +FI+WE FLP LF+RYLNMFEVPVAN ASYPF+VDVP TRFLFSNK TP K+IAKSI Sbjct: 236 NFINWECFLPTLFSRYLNMFEVPVANGSASYPFSVDVPRYTRFLFSNKTATPAKAIAKSI 295 Query: 953 VYLLKPG 973 VYLLKPG Sbjct: 296 VYLLKPG 302 >ref|NP_187941.6| proteasome activator subunit 4 [Arabidopsis thaliana] gi|332641813|gb|AEE75334.1| proteasome activator subunit 4 [Arabidopsis thaliana] Length = 1816 Score = 459 bits (1182), Expect = e-127 Identities = 210/307 (68%), Positives = 255/307 (83%) Frame = +2 Query: 53 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVIDLF 232 MH+YN WLP PV EETK+EKESF VV+ VK P + ESVY TLKWISVI+LF Sbjct: 1 MHLYNEWLPPPVAEETKKEKESFARVVRCVKELHRP-----DDPESVYATLKWISVIELF 55 Query: 233 IKAKSEIGLEDVGELVEFGLEVFHASHNRLYAQVRWGNILVKLLNKYGKKLSLKLQWRPF 412 ++AKSE+ +EDV ELVE GL++FH+S N+LYAQVRWGN+LV+L+NK+ KKLSLK+QWRP Sbjct: 56 VRAKSELSVEDVSELVEIGLQIFHSSENKLYAQVRWGNVLVRLINKFRKKLSLKVQWRPL 115 Query: 413 YDCLVNTHFTRNTGPEGWRLRQRHFETLTSLVRSCRKFFSTGSAFEIWSEFRSLLENPWH 592 YD L++ HF+R+ GPEGWRLRQRHF +TSL+RSCR+FF G+A EIWSEF SLLENPWH Sbjct: 116 YDTLIHAHFSRSPGPEGWRLRQRHFMAVTSLIRSCRRFFPQGAASEIWSEFMSLLENPWH 175 Query: 593 NSSFEGAGFVRLFLPTNLDNRDFFSHDWIRQCIDQWNLIPNCQFWDSQWAAVISRCIKNY 772 NSSFEG+GFVRLFLPTN +N+DFFS WI+ ++ W+ IPNCQFW+SQW +V++R IKN Sbjct: 176 NSSFEGSGFVRLFLPTNPENQDFFSEKWIKNVLELWDSIPNCQFWNSQWTSVLARVIKNC 235 Query: 773 HFIDWETFLPVLFTRYLNMFEVPVANSHASYPFTVDVPGNTRFLFSNKAVTPEKSIAKSI 952 FIDWE++LP+LF+R+LNMFEVPVAN SYPF+VDVP NTRFLFSN+ TP KSIA+SI Sbjct: 236 SFIDWESYLPMLFSRFLNMFEVPVANGSGSYPFSVDVPRNTRFLFSNRTTTPSKSIAQSI 295 Query: 953 VYLLKPG 973 VY LKPG Sbjct: 296 VYFLKPG 302