BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026360
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like [Gly...   156   1e-36
ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like [Gly...   154   6e-36
ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cuc...   153   2e-35
ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Bra...   150   1e-34
ref|XP_003606604.1| 5'-3' exoribonuclease [Medicago truncatula] ...   149   3e-34

>ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
          Length = 1075

 Score =  156 bits (395), Expect = 1e-36
 Identities = 66/92 (71%), Positives = 80/92 (86%)
 Frame = -3

Query: 276 EKDTIQLGMPGWKERYYKEKFSAQSGREIESIRKEIVGKYTEGLCWVLQYYYFGVGSWNW 97
           E+D I+LG PGWKERYY+EKFSA++  E+E+IRK++V KYTEGLCWV+ YYY GV SWNW
Sbjct: 539 EEDKIKLGEPGWKERYYEEKFSAKTPEELEAIRKDVVLKYTEGLCWVMHYYYEGVCSWNW 598

Query: 96  FYPYHYGPFASDLKGLGGVNVSFNMGVPFKPF 1
           FYPYHY PFASDLKGLG +++SF +G PFKPF
Sbjct: 599 FYPYHYAPFASDLKGLGELDISFKLGTPFKPF 630


>ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
          Length = 1065

 Score =  154 bits (390), Expect = 6e-36
 Identities = 65/92 (70%), Positives = 79/92 (85%)
 Frame = -3

Query: 276 EKDTIQLGMPGWKERYYKEKFSAQSGREIESIRKEIVGKYTEGLCWVLQYYYFGVGSWNW 97
           E+D I+LG PGWKERYY EKFSA++  E+E+IRK++V KYTEGLCWV+ YYY GV SWNW
Sbjct: 539 EEDKIKLGEPGWKERYYDEKFSAKTPEELEAIRKDVVLKYTEGLCWVMHYYYEGVCSWNW 598

Query: 96  FYPYHYGPFASDLKGLGGVNVSFNMGVPFKPF 1
           FYPYHY PFASDLKGLG +++SF +G PFKP+
Sbjct: 599 FYPYHYAPFASDLKGLGELDISFKLGTPFKPY 630


>ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
          Length = 1101

 Score =  153 bits (386), Expect = 2e-35
 Identities = 63/92 (68%), Positives = 77/92 (83%)
 Frame = -3

Query: 276 EKDTIQLGMPGWKERYYKEKFSAQSGREIESIRKEIVGKYTEGLCWVLQYYYFGVGSWNW 97
           E+D I+LG+PGW+ERYY EKFSA +  E++ IR ++V +YTEGLCWV+ YYY GV SW W
Sbjct: 548 EEDKIKLGVPGWRERYYNEKFSANTPEELDDIRNDVVLRYTEGLCWVMHYYYEGVCSWQW 607

Query: 96  FYPYHYGPFASDLKGLGGVNVSFNMGVPFKPF 1
           FYPYHY PFASDLKGLG +N+SFN+G PFKPF
Sbjct: 608 FYPYHYAPFASDLKGLGELNISFNLGTPFKPF 639


>ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Brachypodium distachyon]
          Length = 1061

 Score =  150 bits (379), Expect = 1e-34
 Identities = 61/92 (66%), Positives = 78/92 (84%)
 Frame = -3

Query: 276 EKDTIQLGMPGWKERYYKEKFSAQSGREIESIRKEIVGKYTEGLCWVLQYYYFGVGSWNW 97
           E+D ++LG PGW+ERYY++KF A++  +IE IR+++V KYTEGLCWV+ YYY GV SW W
Sbjct: 532 EEDKVKLGEPGWRERYYEDKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQW 591

Query: 96  FYPYHYGPFASDLKGLGGVNVSFNMGVPFKPF 1
           FYPYHY PFASDLKGLG +N++FN+G PFKPF
Sbjct: 592 FYPYHYAPFASDLKGLGELNITFNLGSPFKPF 623


>ref|XP_003606604.1| 5'-3' exoribonuclease [Medicago truncatula]
           gi|355507659|gb|AES88801.1| 5'-3' exoribonuclease
           [Medicago truncatula]
          Length = 909

 Score =  149 bits (375), Expect = 3e-34
 Identities = 63/94 (67%), Positives = 77/94 (81%)
 Frame = -3

Query: 282 GLEKDTIQLGMPGWKERYYKEKFSAQSGREIESIRKEIVGKYTEGLCWVLQYYYFGVGSW 103
           G  +D I+LG PGWKERYY+EKFSA++  E+ +IRK++V KYTEGLCWV+ YYY GV SW
Sbjct: 356 GGHEDKIKLGEPGWKERYYEEKFSAKTPEELVAIRKDVVLKYTEGLCWVMHYYYEGVCSW 415

Query: 102 NWFYPYHYGPFASDLKGLGGVNVSFNMGVPFKPF 1
            WFYPYHY PFASDLKGL  +N++F +G PFKPF
Sbjct: 416 QWFYPYHYAPFASDLKGLSELNINFELGAPFKPF 449