BLASTX nr result

ID: Coptis25_contig00026353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026353
         (1601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280055.2| PREDICTED: LRR receptor-like serine/threonin...   464   e-128
ref|XP_002328588.1| predicted protein [Populus trichocarpa] gi|2...   445   e-122
ref|XP_002520403.1| serine-threonine protein kinase, plant-type,...   437   e-120
ref|NP_181808.1| receptor like protein 29 [Arabidopsis thaliana]...   426   e-117
ref|XP_004173694.1| PREDICTED: LRR receptor-like serine/threonin...   425   e-116

>ref|XP_002280055.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            ERECTA-like [Vitis vinifera] gi|147832384|emb|CAN62290.1|
            hypothetical protein VITISV_017315 [Vitis vinifera]
          Length = 427

 Score =  464 bits (1194), Expect = e-128
 Identities = 248/405 (61%), Positives = 284/405 (70%), Gaps = 5/405 (1%)
 Frame = -1

Query: 1523 MEPFELETLFKIMETMSSDRNWRLTNPNPCKPG--WQGIECKQGV-DNHLHVSRLDFGSP 1353
            M+P E ETLF IM++MSSD  WR++ PNPC     W GIECK G  D  LHVSRLDFGSP
Sbjct: 1    MDPSEAETLFNIMDSMSSDHTWRISFPNPCNSASSWPGIECKPGQNDKLLHVSRLDFGSP 60

Query: 1352 PYPSCKNTATFPSEIFNLPYLQSAFFYHCFTHTKTSLSIP--PRVXXXXXXXXXXXXXXX 1179
            P PSCK TATFPS++F LPYLQS FF+HCFT TKT++S+P                    
Sbjct: 61   PNPSCKTTATFPSQVFTLPYLQSLFFFHCFTQTKTNISLPLLSHPSNASSLQQLSLRSNP 120

Query: 1178 XLIGPIPPQISLLNSLQILTLSQNNLNEQIPVQLFALTSLIHLDLSYNFLTGTIPNQVGM 999
             L+GPIP QIS L+SLQILTLSQN L  +IPVQ+F+L SL+HLDLSYN LTG IP Q+G 
Sbjct: 121  ALVGPIPSQISSLHSLQILTLSQNRLAGRIPVQIFSLNSLVHLDLSYNLLTGPIPPQLGS 180

Query: 998  LRNLVGLDLSYNSFMGAIPATIGELGILQKLDLSSNMLTGSIPPTVEKLNLLVFIALSTN 819
            LRNLVGLDLSYNS  G+IP TIG++G+LQK DLSSN L G+IP ++EKLN LVF+ALS+N
Sbjct: 181  LRNLVGLDLSYNSLSGSIPDTIGQMGLLQKFDLSSNFLVGNIPDSIEKLNSLVFMALSSN 240

Query: 818  KLQGTFPKGLAKLHSLQYFLMDDNPMFIPLPFXXXXXXXXXXXXLANSGYTGIIPXXXXX 639
            +L G FP+GLAKL SLQYF+MDDNPMFIPLP             +ANSGY+G IP     
Sbjct: 241  RLGGKFPQGLAKLQSLQYFIMDDNPMFIPLPEEFGKLMKLQELRVANSGYSGTIPTSFSH 300

Query: 638  XXXXXXXXXXXXXXTGEIPVGLSSLSHIYHLNLSRNMLNGVVPFNSGFCSRLGRNLDLSG 459
                          TGEIP G  SLSHIYHLNLSRNML G+VPFNS F  RLGRNLDLS 
Sbjct: 301  LTNLSTLSLQNNRLTGEIPEGFGSLSHIYHLNLSRNMLAGIVPFNSIFLKRLGRNLDLSA 360

Query: 458  NPGLCLNGAEALESVKIGVGVCGKNNNPSMGKSFKKSRAPSHGFC 324
            NPGLCL+ +EA   VKIGV VCG N   S  + F KS APS G C
Sbjct: 361  NPGLCLSPSEAY-GVKIGVNVCGTNRTVSTIQPFNKSEAPS-GLC 403


>ref|XP_002328588.1| predicted protein [Populus trichocarpa] gi|222838570|gb|EEE76935.1|
            predicted protein [Populus trichocarpa]
          Length = 398

 Score =  445 bits (1145), Expect = e-122
 Identities = 232/388 (59%), Positives = 272/388 (70%), Gaps = 7/388 (1%)
 Frame = -1

Query: 1532 ANNMEPFELETLFKIMETMSSDRNWRLTNPNPCKPG--WQGIECKQGVDNHLHVSRLDFG 1359
            A NM P E+ET+FKIME++SSD  WR++ PNPC PG  W GIECK G DNHLHVSRLDFG
Sbjct: 9    AKNMLPSEVETIFKIMESISSDEKWRISYPNPCNPGSTWLGIECKLGQDNHLHVSRLDFG 68

Query: 1358 SPPYPSCKNTATFPSEIFNLPYLQSAFFYHCFTHTKTSLSIPPR---VXXXXXXXXXXXX 1188
            + P P+CKNTA FP EIF+LP+LQS FF  CFTHTKT+LS  P                 
Sbjct: 69   THPNPTCKNTAAFPCEIFDLPHLQSVFFSQCFTHTKTTLSASPNRGGAFFDSSLQQLSLR 128

Query: 1187 XXXXLIGPIPPQISLLNSLQILTLSQNNLNEQIPVQLFALTSLIHLDLSYNFLTGTIPNQ 1008
                L+GPIPPQIS L SL+ILTLSQN L+ +IPV++F+L SL+HLDLSYN LTG +P Q
Sbjct: 129  SNPALVGPIPPQISFLKSLEILTLSQNRLSGRIPVEIFSLNSLVHLDLSYNMLTGPVPIQ 188

Query: 1007 VGMLRNLVGLDLSYNSFMGAIPATIGELGILQKLDLSSNMLTGSIPPTVEKLNLLVFIAL 828
            +G L NL GLDLSYNS  G IP TIG LG+LQKLDLSSN   G+IP ++EKL LL F+AL
Sbjct: 189  LGNLNNLQGLDLSYNSLTGPIPGTIGRLGMLQKLDLSSNSFIGTIPYSIEKLTLLTFMAL 248

Query: 827  STNKLQGTFPKGLAKLHSLQYFLMDDNPMFIPLPFXXXXXXXXXXXXLANSGYTGIIPXX 648
            S NKL+G+ PKG+ KL SLQYF+MDDNPM+IPLP             L+NS Y+G IP  
Sbjct: 249  SNNKLRGSIPKGILKLQSLQYFIMDDNPMYIPLPAEFGKLVKLQELRLSNSCYSGTIPPS 308

Query: 647  XXXXXXXXXXXXXXXXXTGEIPVGLSSLSHIYHLNLSRNMLNGVVPFNSGFCSRLGRNLD 468
                             TG+IP G SSLS IYHLNLS N+L GV+PFN+ F  RLGRNLD
Sbjct: 309  FSLLVNLSTLSLQNNRLTGKIPEGFSSLSRIYHLNLSGNLLGGVIPFNASFLKRLGRNLD 368

Query: 467  LSGNPGLCLNGAEALESVK--IGVGVCG 390
            LSGNPGLCL+ +EA  +VK   GVGVCG
Sbjct: 369  LSGNPGLCLSPSEAYNNVKSGSGVGVCG 396


>ref|XP_002520403.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223540450|gb|EEF42019.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 457

 Score =  437 bits (1123), Expect = e-120
 Identities = 236/418 (56%), Positives = 278/418 (66%), Gaps = 6/418 (1%)
 Frame = -1

Query: 1562 FQPSNKTTFQANNMEPFELETLFKIMETMSSDRNWRLTNPNPCKPG--WQGIECKQGVDN 1389
            F P        N++ P E +TLF+IM++MSSD++WR + PNPC P   W GIECK G DN
Sbjct: 23   FLPYFSILHATNDILPSEADTLFEIMDSMSSDQSWRTSYPNPCSPLSLWPGIECKLGPDN 82

Query: 1388 HLHVSRLDFGSPPYPSCKNTATFPSEIFNLPYLQSAFFYHCFTHTKTSLSIPPR--VXXX 1215
            HLHVSRLDFG+PP P+CK+ ATFP++IF+LPYLQS FF +CFTHTKT LS+     +   
Sbjct: 83   HLHVSRLDFGTPPNPTCKSIATFPNKIFSLPYLQSVFFLNCFTHTKTLLSVSSDGLIMFN 142

Query: 1214 XXXXXXXXXXXXXLIGPIPPQISLLNSLQILTLSQNNLNEQIPVQLFALTSLIHLDLSYN 1035
                         L GPIP Q SLL SLQILTLSQN+L+  IPV +F+L+SL+HLDLSYN
Sbjct: 143  SSLQQLSLRSNPALFGPIPHQFSLLKSLQILTLSQNHLSGPIPVGIFSLSSLVHLDLSYN 202

Query: 1034 FLTGTIPNQVGMLRNLVGLDLSYNSFMGAIPATIGELGILQKLDLSSNMLTGSIPPTVEK 855
             LTG IP Q+G L NLVGLDLSYNS  G IP T+G+LG LQKLDLSSN L G IP +++K
Sbjct: 203  MLTGAIPTQLGNLYNLVGLDLSYNSLTGLIPDTVGQLGRLQKLDLSSNSLIGRIPDSIQK 262

Query: 854  LNLLVFIALSTNKLQGTFPKGLAKLHSLQYFLMDDNPMFIPLPFXXXXXXXXXXXXLANS 675
            L+ L F+ALS N+ +G FP GL  L SLQYF+MDDNPM IPLP             LANS
Sbjct: 263  LSSLAFMALSNNRFRGYFPTGLQNLQSLQYFIMDDNPMNIPLPVDLSKLVKLQELRLANS 322

Query: 674  GYTGIIPXXXXXXXXXXXXXXXXXXXTGEIPVGLSSLSHIYHLNLSRNMLNGVVPFNSGF 495
            GY+G IP                    GEIP    SLSHIYHLNLSRN+L GVVPFN+ F
Sbjct: 323  GYSGTIPASFSLLTNLSTLSLQNNRLIGEIPPDFGSLSHIYHLNLSRNLLGGVVPFNASF 382

Query: 494  CSRLGRNLDLSGNPGLCLNGAEALESVKI--GVGVCGKNNNPSMGKSFKKSRAPSHGF 327
              RLGRNLDLSGNPGLCLN  EA  +VKI  GV VC  + N S+ K  + S   S  F
Sbjct: 383  LKRLGRNLDLSGNPGLCLNPTEAY-NVKIGSGVSVCSSSKNGSLNKKSQASNGCSIPF 439


>ref|NP_181808.1| receptor like protein 29 [Arabidopsis thaliana]
            gi|4512674|gb|AAD21728.1| hypothetical protein
            [Arabidopsis thaliana] gi|66792706|gb|AAY56455.1|
            At2g42800 [Arabidopsis thaliana]
            gi|330255076|gb|AEC10170.1| receptor like protein 29
            [Arabidopsis thaliana]
          Length = 462

 Score =  426 bits (1096), Expect = e-117
 Identities = 226/399 (56%), Positives = 266/399 (66%), Gaps = 2/399 (0%)
 Frame = -1

Query: 1526 NMEPFELETLFKIMETMSSDRNWRLTNPNPCKPG--WQGIECKQGVDNHLHVSRLDFGSP 1353
            +M P E ETLFKIME+MSSD+ WR ++PNPC PG  W GIECK G D+  HVSRLDFGS 
Sbjct: 34   SMPPSESETLFKIMESMSSDQQWRQSHPNPCAPGSSWPGIECKTGPDHLSHVSRLDFGSA 93

Query: 1352 PYPSCKNTATFPSEIFNLPYLQSAFFYHCFTHTKTSLSIPPRVXXXXXXXXXXXXXXXXL 1173
            P PSCK++A+FPS IF LP+LQS FF++CFTH  T++  P ++                L
Sbjct: 94   PNPSCKSSASFPSSIFTLPFLQSVFFFNCFTHFPTTIMFPIKLIPNSSLQQLSLRSNPSL 153

Query: 1172 IGPIPPQISLLNSLQILTLSQNNLNEQIPVQLFALTSLIHLDLSYNFLTGTIPNQVGMLR 993
             G IPP+IS L SLQILTLSQN L   IP  +F+L SL+HLDLSYN LTG IP Q+G L 
Sbjct: 154  SGQIPPRISSLKSLQILTLSQNRLTGDIPPAIFSLKSLVHLDLSYNKLTGKIPLQLGNLN 213

Query: 992  NLVGLDLSYNSFMGAIPATIGELGILQKLDLSSNMLTGSIPPTVEKLNLLVFIALSTNKL 813
            NLVGLDLSYNS  G IP TI +LG+LQKLDLSSN L G IP  VEKL  L F+ALS NKL
Sbjct: 214  NLVGLDLSYNSLTGTIPPTISQLGMLQKLDLSSNSLFGRIPEGVEKLRSLSFMALSNNKL 273

Query: 812  QGTFPKGLAKLHSLQYFLMDDNPMFIPLPFXXXXXXXXXXXXLANSGYTGIIPXXXXXXX 633
            +G FPKG++ L SLQYF+MD+NPMF+ LP             L NSGY+G+IP       
Sbjct: 274  KGAFPKGISNLQSLQYFIMDNNPMFVALPVELGFLPKLQELQLENSGYSGVIPESYTKLT 333

Query: 632  XXXXXXXXXXXXTGEIPVGLSSLSHIYHLNLSRNMLNGVVPFNSGFCSRLGRNLDLSGNP 453
                        TGEIP G  SL H++HLNLSRN+L GVVPF+S F  RLG+NLDLSGN 
Sbjct: 334  NLSSLSLANNRLTGEIPSGFESLPHVFHLNLSRNLLIGVVPFDSSFLRRLGKNLDLSGNR 393

Query: 452  GLCLNGAEALESVKIGVGVCGKNNNPSMGKSFKKSRAPS 336
            GLCLN  +    VK GV VCGKN +   G S   S+  S
Sbjct: 394  GLCLNPEDEFSVVKTGVDVCGKNVSSGGGLSVHSSKKKS 432


>ref|XP_004173694.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            ERECTA-like, partial [Cucumis sativus]
          Length = 446

 Score =  425 bits (1092), Expect = e-116
 Identities = 230/426 (53%), Positives = 281/426 (65%), Gaps = 5/426 (1%)
 Frame = -1

Query: 1562 FQPSNKTTFQANNMEPFELETLFKIMETMSSDRNWRLTNPNPCKPG--WQGIECKQGVDN 1389
            F P         +M PFELETLFKIM++MS+D+NWRL+ PNPC+PG  W G+ECK    N
Sbjct: 12   FSPILANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPGLECKSSFIN 71

Query: 1388 H---LHVSRLDFGSPPYPSCKNTATFPSEIFNLPYLQSAFFYHCFTHTKTSLSIPPRVXX 1218
            +    HVSRLDFG+ PYPSCK TA FPS IF+LP+L S FF++CFT T T+LSI P    
Sbjct: 72   NTNLFHVSRLDFGTYPYPSCKPTAIFPSFIFDLPHLHSLFFFNCFTQTNTTLSISP--FS 129

Query: 1217 XXXXXXXXXXXXXXLIGPIPPQISLLNSLQILTLSQNNLNEQIPVQLFALTSLIHLDLSY 1038
                          L GPIP ++S L SL+ILTLSQN L   IP ++F L SL+HLDLSY
Sbjct: 130  NSSLQQLSLRSNPALTGPIPSRLSSLKSLKILTLSQNRLFGAIPNEVFELVSLVHLDLSY 189

Query: 1037 NFLTGTIPNQVGMLRNLVGLDLSYNSFMGAIPATIGELGILQKLDLSSNMLTGSIPPTVE 858
            N LTG+IP ++G LR+L GLDLSYNS  G IP TIG+LG+LQKLDLSSN LT +IP ++ 
Sbjct: 190  NMLTGSIPIELGNLRSLEGLDLSYNSLNGPIPTTIGQLGLLQKLDLSSNSLTFNIPDSIV 249

Query: 857  KLNLLVFIALSTNKLQGTFPKGLAKLHSLQYFLMDDNPMFIPLPFXXXXXXXXXXXXLAN 678
            KLN LVF+ALS+N+ +G FP+GL KL +LQYF+MDDNPM  PLP             LA+
Sbjct: 250  KLNSLVFLALSSNQFRGYFPEGLEKLQNLQYFIMDDNPMQTPLPLAFGELVKLQELRLAS 309

Query: 677  SGYTGIIPXXXXXXXXXXXXXXXXXXXTGEIPVGLSSLSHIYHLNLSRNMLNGVVPFNSG 498
             GY+GIIP                   +G+IPVG S LSHIYHLNLSRN L+G VPFNS 
Sbjct: 310  CGYSGIIPPSFSLLKNLTTLSLQNNHLSGQIPVGFSGLSHIYHLNLSRNSLSGAVPFNSS 369

Query: 497  FCSRLGRNLDLSGNPGLCLNGAEALESVKIGVGVCGKNNNPSMGKSFKKSRAPSHGFCIL 318
            F  RLG+NLDL+GNP LC + +EA+ + K+GV VCG   N S  +   KS  P   FC  
Sbjct: 370  FLKRLGKNLDLTGNPSLCFSPSEAITAQKLGVTVCGSKENGSFIQPSNKS-LPRSSFCCN 428

Query: 317  LNVFSI 300
               F+I
Sbjct: 429  PFAFAI 434


Top