BLASTX nr result

ID: Coptis25_contig00026348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026348
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    62   4e-08
gb|ABN09155.1| Polynucleotidyl transferase, Ribonuclease H fold ...    60   2e-07
ref|XP_003621967.1| Heat shock protein [Medicago truncatula] gi|...    57   1e-06
gb|ABN08954.1| Ribonuclease H [Medicago truncatula]                    55   8e-06

>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
 Frame = -3

Query: 266 YIAECLAILEGVEYAVQRNWKKLWVELDSAAAVHAFGS-SQLPWGMKQRWDKCKEKLEYC 90
           Y  E  AI+  VE A QRNW+ +W+E DSA  V AF   S +P  ++ RW  C++ L  C
Sbjct: 273 YQPELAAIMRVVEIAYQRNWRNIWIESDSALVVMAFKKMSMIPCRLRNRWINCRKLL--C 330

Query: 89  K----ITPTWRECNFSADKVAKYAADLQ 18
           +    IT  +RE N  ADK+A    D++
Sbjct: 331 RMNFVITHIYREDNRCADKLASKGLDIE 358


>gb|ABN09155.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 99

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
 Frame = -3

Query: 233 VEYAVQRNWKKLWVELDSAAAVHAFGSSQL-PWGMKQRWDKCKEKLEYCK--ITPTWREC 63
           +E A QR + +LW+E DS  AV AF SS L PW ++ RWD C E +      IT  +RE 
Sbjct: 4   IEIAKQRGYSRLWIETDSKLAVLAFKSSNLIPWKIRNRWDNCMEYISNIAFLITHIYREG 63

Query: 62  NFSADKVAKYAADLQT 15
           N  ADK A     L +
Sbjct: 64  NVCADKFANIGLSLNS 79


>ref|XP_003621967.1| Heat shock protein [Medicago truncatula]
           gi|357503391|ref|XP_003621984.1| Heat shock protein
           [Medicago truncatula] gi|355496982|gb|AES78185.1| Heat
           shock protein [Medicago truncatula]
           gi|355496999|gb|AES78202.1| Heat shock protein [Medicago
           truncatula]
          Length = 553

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
 Frame = -3

Query: 251 LAILEGVEYAVQRNWKKLWVELDSAAAVHAFGSSQL-PWGMKQRWDKCKEKLE--YCKIT 81
           + ++  VE A+ RNW  LW+E DS  A  A  S  + PW +K RW  C   +    C IT
Sbjct: 346 MGVILAVECAIDRNWNNLWIESDSKLANLAVKSPNIVPWQLKNRWLNCVHLMSNMNCMIT 405

Query: 80  PTWRECNFSADKVAK 36
             +RE N  ADK+A+
Sbjct: 406 HIYREGNHCADKLAR 420


>gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
          Length = 175

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
 Frame = -3

Query: 272 TNYIAECLAILEGVEYAVQRNWKKLWVELDSAAAVHAFGSSQ-LPWGMKQRWDKC---KE 105
           T + AE  A +  +E +++ N + +W+E DS   V AF SS+ +PW ++ RW+ C    +
Sbjct: 51  TCFKAELCAAIFAIEKSIEYNLRDIWLETDSKLVVKAFSSSEHVPWQLRTRWNNCLALAQ 110

Query: 104 KLEYCKITPTWRECNFSADKVAKYAADL 21
           K++ C  T   RE N  AD +AK    L
Sbjct: 111 KIK-CVCTHIHREGNAGADSLAKNGKSL 137


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