BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026339
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510805.1| conserved hypothetical protein [Ricinus comm...   126   2e-27
ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like...   115   3e-24
ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like...   114   1e-23
ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|NP_001149363.1| XPG I-region family protein [Zea mays] gi|22...   112   2e-23

>ref|XP_002510805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549920|gb|EEF51407.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 586

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/69 (85%), Positives = 64/69 (92%)
 Frame = +1

Query: 1   IYRDIDLGDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVR 180
           +YRDI LGDGGHVVCYEM DIERKLGFGRNSLITLALLLGSDYS GV G GPE+ACQIV+
Sbjct: 175 VYRDICLGDGGHVVCYEMADIERKLGFGRNSLITLALLLGSDYSQGVRGLGPESACQIVK 234

Query: 181 SLGDHNVLR 207
           S+GDHNVL+
Sbjct: 235 SVGDHNVLQ 243


>ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera]
           gi|297741051|emb|CBI31782.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/69 (78%), Positives = 62/69 (89%)
 Frame = +1

Query: 1   IYRDIDLGDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVR 180
           +YRDI LG+GG+VVCYEM DIE  LGFGRNSLITLALLLGSDYS GVHGFGPE+ACQIV+
Sbjct: 174 VYRDICLGEGGYVVCYEMADIESTLGFGRNSLITLALLLGSDYSQGVHGFGPESACQIVK 233

Query: 181 SLGDHNVLR 207
           S+G+  VL+
Sbjct: 234 SVGEEVVLK 242


>ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max]
          Length = 588

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/69 (75%), Positives = 61/69 (88%)
 Frame = +1

Query: 1   IYRDIDLGDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVR 180
           +YRDI LGDGG+VVCYEM DIERKLGFGR+SLI L+LLLGSDY  GVHG GPE+ACQIV+
Sbjct: 176 VYRDICLGDGGYVVCYEMTDIERKLGFGRDSLIALSLLLGSDYYQGVHGLGPESACQIVK 235

Query: 181 SLGDHNVLR 207
           S+GD  +L+
Sbjct: 236 SIGDKYILK 244


>ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/69 (78%), Positives = 63/69 (91%)
 Frame = +1

Query: 1   IYRDIDLGDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVR 180
           +YRDI LG+G HVVCYEM ++ERKLGFGRNSLITLAL+LGSDYS GVHG GPE+ACQIV+
Sbjct: 175 VYRDICLGEG-HVVCYEMEEVERKLGFGRNSLITLALILGSDYSPGVHGLGPESACQIVK 233

Query: 181 SLGDHNVLR 207
           S+GD NVL+
Sbjct: 234 SIGDSNVLQ 242


>ref|NP_001149363.1| XPG I-region family protein [Zea mays] gi|224029981|gb|ACN34066.1|
           unknown [Zea mays] gi|413941545|gb|AFW74194.1| XPG
           I-region family protein [Zea mays]
          Length = 688

 Score =  112 bits (281), Expect = 2e-23
 Identities = 49/68 (72%), Positives = 62/68 (91%)
 Frame = +1

Query: 1   IYRDIDLGDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVR 180
           +YRD+ +G+GG+V+CYEM DI+ KLGFGRNSLI+LA+LLGSDYS+GVHGFGPE AC++V+
Sbjct: 175 VYRDVFIGEGGYVICYEMEDIQNKLGFGRNSLISLAVLLGSDYSNGVHGFGPEAACRLVK 234

Query: 181 SLGDHNVL 204
           SLGD  VL
Sbjct: 235 SLGDDTVL 242