BLASTX nr result

ID: Coptis25_contig00026335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026335
         (1818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285816.1| PREDICTED: F-box/kelch-repeat protein At1g22...   667   0.0  
gb|AFY26883.1| F-box family protein [Morella rubra]                   637   e-180
ref|XP_002271882.1| PREDICTED: F-box/kelch-repeat protein At1g22...   615   e-173
ref|XP_003531046.1| PREDICTED: F-box/kelch-repeat protein At1g22...   607   e-171
ref|XP_003526599.1| PREDICTED: F-box/kelch-repeat protein At1g22...   605   e-170

>ref|XP_002285816.1| PREDICTED: F-box/kelch-repeat protein At1g22040 [Vitis vinifera]
          Length = 477

 Score =  667 bits (1720), Expect = 0.0
 Identities = 331/477 (69%), Positives = 382/477 (80%), Gaps = 20/477 (4%)
 Frame = -2

Query: 1472 MGGILS----KSGTGEYNEILQSASCKRQRMSCIPDEDNPRLIPNLPDEISIQILARLPR 1305
            MG  LS    KS T E++E  Q  +CKRQRMS   +E+NPRLIP+LPDEISI ILARLPR
Sbjct: 1    MGSFLSLAGPKSRTSEHDEGSQHETCKRQRMSSSFNEENPRLIPSLPDEISILILARLPR 60

Query: 1304 IYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKWQ 1125
            I Y +++LVSR+WK  +T  ELF+LRKELG TEEWLYILTKVEED+LLWHA DPLS++WQ
Sbjct: 61   ICYFDLRLVSRNWKATITSPELFNLRKELGKTEEWLYILTKVEEDRLLWHALDPLSRRWQ 120

Query: 1124 RLPPMPPVAKGEEPRKVLAGL------------ADVIRNWLGRRDPLDRLPYCGCAIGAV 981
            RLP MP V   EE RKV +GL            ADVIR WLGR+D LD++P+CGCAIGAV
Sbjct: 121  RLPSMPNVVYEEESRKVSSGLWMWNMVGPSIKIADVIRGWLGRKDTLDQMPFCGCAIGAV 180

Query: 980  DGCLYVLGGFSRASAVKCVWCFNPILNMWSEVESMSIGRAYCKTGVLKNKLYXXXXXXXX 801
            DGCLYVLGGFS AS ++CVW F+PILN WSEV  MS GRAYCKTG+L +KLY        
Sbjct: 181  DGCLYVLGGFSSASTMRCVWRFDPILNAWSEVTPMSTGRAYCKTGILNDKLYVVGGVSRG 240

Query: 800  XXGLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLCVP 621
              GLTPLQSAEV+DPCT  WS++PSMPFS+AQ+LPTAFLADMLKPIATGMT+Y GRLCVP
Sbjct: 241  RGGLTPLQSAEVFDPCTDTWSQIPSMPFSRAQVLPTAFLADMLKPIATGMTSYMGRLCVP 300

Query: 620  QSLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPSSS 441
            QSLYSWPFFVDVGGE+YDPE+N+W+EMP GMGDGWPARQAGTKLSVVV+ ELYA DPSSS
Sbjct: 301  QSLYSWPFFVDVGGEIYDPETNSWVEMPIGMGDGWPARQAGTKLSVVVDGELYAFDPSSS 360

Query: 440  LDSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVLQA 261
            LDSG IK+Y  ++DAWKVV+GKVPI DFTDSESPYLLAGF G+LH+ITKD NHD+ VLQA
Sbjct: 361  LDSGNIKVYDQKEDAWKVVIGKVPICDFTDSESPYLLAGFHGKLHIITKDANHDIAVLQA 420

Query: 260  DPHNR----SSSAPAPLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVSCQVLDI 102
            D  +      S++P+    S  E SD L E+ET +WKVIAT +FG+AELVSCQVLDI
Sbjct: 421  DLRDNLGFPPSTSPSCSAASSHEHSDLLAETETVVWKVIATRDFGTAELVSCQVLDI 477


>gb|AFY26883.1| F-box family protein [Morella rubra]
          Length = 473

 Score =  637 bits (1642), Expect = e-180
 Identities = 309/473 (65%), Positives = 370/473 (78%), Gaps = 16/473 (3%)
 Frame = -2

Query: 1472 MGGILSKSG----TGEYNEILQSASCKRQRMSCIPDEDNPRLIPNLPDEISIQILARLPR 1305
            MG  LS  G    TG+Y ++ Q+ +CKRQRMS    E++ RLIP+LPDE+S+QI+ARLPR
Sbjct: 1    MGQFLSLGGQKCRTGDYTKVSQNDTCKRQRMSSSFTEESARLIPSLPDELSMQIIARLPR 60

Query: 1304 IYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKWQ 1125
            I+Y +V+LVSR W   V   ELF LR+EL  TEEWLY+LTKVEEDKL WHA DPLS+KWQ
Sbjct: 61   IHYFDVRLVSRKWMATVMSPELFKLRRELRKTEEWLYLLTKVEEDKLSWHALDPLSRKWQ 120

Query: 1124 RLPPMPPVAKGEEPRKVLAGL------------ADVIRNWLGRRDPLDRLPYCGCAIGAV 981
            RLP +P V   +E RK  +GL            A+V+R WLGR+D LD++P+CGCAIGAV
Sbjct: 121  RLPMIPHVVYEDESRKGFSGLWMWNMAGPSVNIAEVVRRWLGRKDSLDQMPFCGCAIGAV 180

Query: 980  DGCLYVLGGFSRASAVKCVWCFNPILNMWSEVESMSIGRAYCKTGVLKNKLYXXXXXXXX 801
            DGCLYVLGGF RA  +KCVW F+PI N WSEV SMS GRAYCKTG+L NKLY        
Sbjct: 181  DGCLYVLGGFCRALTMKCVWKFDPIKNDWSEVTSMSTGRAYCKTGILNNKLYVVGGVSQG 240

Query: 800  XXGLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLCVP 621
               LTPLQSAEV+DP TG WS+VP+MPFSKAQ LPTAFLADMLKPIATG+T Y GRLCVP
Sbjct: 241  RGSLTPLQSAEVFDPSTGSWSQVPNMPFSKAQALPTAFLADMLKPIATGLTPYMGRLCVP 300

Query: 620  QSLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPSSS 441
            QSLYSWPFFVDVGGE+YDPE+N+W+EMP+GMG+GWPARQAGTKLSVVV+ ELYA DPSSS
Sbjct: 301  QSLYSWPFFVDVGGEIYDPETNSWIEMPNGMGEGWPARQAGTKLSVVVDGELYAFDPSSS 360

Query: 440  LDSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVLQA 261
            +DSGKIK+Y  ++DAWKVV+GKVP++DF D+ESPYLLAGF G+LHVITKD +H + VLQA
Sbjct: 361  MDSGKIKVYDRKEDAWKVVIGKVPMHDFADTESPYLLAGFHGKLHVITKDSSHHIAVLQA 420

Query: 260  DPHNRSSSAPAPLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVSCQVLDI 102
            D  +  SS+ +    SL E S S+ ES+  +W+VI T +FG AE+VSCQVL+I
Sbjct: 421  DSCSSPSSSSSLFAGSLNENSGSMAESDAVVWRVIGTRDFGPAEMVSCQVLEI 473


>ref|XP_002271882.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Vitis vinifera]
          Length = 479

 Score =  615 bits (1585), Expect = e-173
 Identities = 306/479 (63%), Positives = 370/479 (77%), Gaps = 22/479 (4%)
 Frame = -2

Query: 1472 MGGILSKSGTG----EYNEILQSASCKRQRMSCIPDEDNP--RLIPNLPDEISIQILARL 1311
            MG  LS +G+     E++E+    +CKRQR+S    E+N   RLIPNLPDEIS QILAR+
Sbjct: 1    MGSALSLNGSKTRFEEHSEVSVDETCKRQRLSSSISEENENVRLIPNLPDEISFQILARV 60

Query: 1310 PRIYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKK 1131
            PRI+YLNV+LVSRSWK A+  TELF+LRKELG TEEWLYILTK+++DKLLW++ DPLS++
Sbjct: 61   PRIFYLNVRLVSRSWKGAIMSTELFNLRKELGTTEEWLYILTKIKDDKLLWYSLDPLSRR 120

Query: 1130 WQRLPPMPPVAKGEEPRKVLAGL------------ADVIRNWLGRRDPLDRLPYCGCAIG 987
            WQRLPPMP VA  +  RK  +GL            ADVIR WLGRRD LDR+P+CG AIG
Sbjct: 121  WQRLPPMPNVAHEDGYRKGFSGLRMLNMVGSSNKIADVIRGWLGRRDELDRIPFCGSAIG 180

Query: 986  AVDGCLYVLGGFSRASAVKCVWCFNPILNMWSEVESMSIGRAYCKTGVLKNKLYXXXXXX 807
             VDGCLYVLGGFSRASA+  VW ++P+ N WSEV  MSIGRAYCKTGVL NKLY      
Sbjct: 181  TVDGCLYVLGGFSRASALTSVWRYDPVQNGWSEVSPMSIGRAYCKTGVLNNKLYVVGGVT 240

Query: 806  XXXXGLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLC 627
                GL PLQSAEV+DP TG+WS++PSMPF+KAQ+LPTAFLAD+LKPIATGMT+Y+G+L 
Sbjct: 241  RGRGGLIPLQSAEVFDPRTGVWSQIPSMPFAKAQVLPTAFLADLLKPIATGMTSYKGKLF 300

Query: 626  VPQSLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPS 447
            VPQSLY WPFFVDVGGEVYDPE+N+W EMP GMG+GWPARQAGTKL  +V++ELYALDPS
Sbjct: 301  VPQSLYYWPFFVDVGGEVYDPETNSWFEMPVGMGEGWPARQAGTKLGAIVDDELYALDPS 360

Query: 446  SSLDSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVL 267
            SS D   IK+Y ++ D+WKVV   VPI+DF ++ESPYLLA  LG+LHVITKD N++  VL
Sbjct: 361  SSADIATIKVYDYQCDSWKVVSTDVPIHDFAEAESPYLLASLLGKLHVITKDANNNFTVL 420

Query: 266  QADPHNRSSSAP----APLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVSCQVLDI 102
            QA+  N   S P    +PL ++  EQ++S  ESETD+WKVIA  + G+ ELVSCQ+L I
Sbjct: 421  QANMQNHLHSFPLTPLSPLGNNSSEQTESAAESETDVWKVIAARSAGACELVSCQILGI 479


>ref|XP_003531046.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Glycine max]
          Length = 481

 Score =  607 bits (1566), Expect = e-171
 Identities = 301/481 (62%), Positives = 364/481 (75%), Gaps = 24/481 (4%)
 Frame = -2

Query: 1472 MGGIL----SKSGTGEYNEILQSASCKRQRMSCIPDEDNPRLIPNLPDEISIQILARLPR 1305
            MG IL    SK+   + + +LQ  SCKRQR+S    EDNPRLIP+LPDEISIQILAR+PR
Sbjct: 1    MGNILNLNNSKTRRNDSHGVLQGESCKRQRLSPNSCEDNPRLIPSLPDEISIQILARVPR 60

Query: 1304 IYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKWQ 1125
            IYYLN+KLV R+WK     +ELF +RKELG  EEWLYILTKV +DKLLW+A DPLS++WQ
Sbjct: 61   IYYLNLKLVCRAWKETFVSSELFCVRKELGSMEEWLYILTKVNDDKLLWYALDPLSRRWQ 120

Query: 1124 RLPPMPPVAKGEEPRKVLAG--------------LADVIRNWLGRRDPLDRLPYCGCAIG 987
            +LPPMP V   +E +K L                + DVI +WLGRRD LD +P+CGC+IG
Sbjct: 121  KLPPMPKVGFEDETKKGLISFPLRMWSMMGSSIRIVDVIMSWLGRRDALDWMPFCGCSIG 180

Query: 986  AVDGCLYVLGGFSRASAVKCVWCFNPILNMWSEVESMSIGRAYCKTGVLKNKLYXXXXXX 807
            AVDGC+Y LGGFSRASA+K VW ++PI N W+E   MS+GRAYCKTG+L NKLY      
Sbjct: 181  AVDGCIYALGGFSRASAMKYVWQYDPIKNSWAEASPMSVGRAYCKTGILNNKLYVVGGVT 240

Query: 806  XXXXGLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLC 627
                GL+PLQSAEVYDP TG+WS +PSMPF++AQ+LPTAFLAD+LKPIATGM +Y+GRL 
Sbjct: 241  RGRGGLSPLQSAEVYDPHTGMWSLLPSMPFARAQVLPTAFLADLLKPIATGMASYKGRLF 300

Query: 626  VPQSLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPS 447
            VPQSLY WPFFVDVGGEVYDP  N+WLEMP GMG+GWPARQAGTKLSV V+++LYALDPS
Sbjct: 301  VPQSLYCWPFFVDVGGEVYDPNLNSWLEMPIGMGEGWPARQAGTKLSVTVDDDLYALDPS 360

Query: 446  SSLDSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVL 267
            +SLDS KIK+Y +E D WKV  G VPI+DFT+SESPYLLAG LG+LHVITKD NH++ VL
Sbjct: 361  NSLDSAKIKVYDYEGDTWKVAAGDVPIHDFTESESPYLLAGLLGKLHVITKDANHNITVL 420

Query: 266  QADPHNR------SSSAPAPLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVSCQVLD 105
            QAD  N       S S  +   +S+ E ++S  E++ + WKV+AT +  SAELV+CQ L 
Sbjct: 421  QADMQNEHAESAFSQSILSSPDNSISEDAESSAETQGEFWKVLATRSGRSAELVNCQSLK 480

Query: 104  I 102
            I
Sbjct: 481  I 481


>ref|XP_003526599.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Glycine max]
          Length = 476

 Score =  605 bits (1559), Expect = e-170
 Identities = 299/477 (62%), Positives = 365/477 (76%), Gaps = 20/477 (4%)
 Frame = -2

Query: 1472 MGGILSKSGTG----EYNEILQSASCKRQRMSCIPDEDNPRLIPNLPDEISIQILARLPR 1305
            MG   S + T     E +EI  + +CKRQRMS   DE+NPRLIPNLPDE+S+QI+ARLPR
Sbjct: 1    MGAFFSVASTKPDQRECSEISPNEACKRQRMSPTVDEENPRLIPNLPDELSLQIIARLPR 60

Query: 1304 IYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKWQ 1125
            I Y NV+LVS+ WK+ +  +EL+ LRKELG TEEWLY+L KV E+ LLW+A DP SK WQ
Sbjct: 61   ICYFNVRLVSKKWKSTIMSSELYKLRKELGTTEEWLYLLVKVGENNLLWYALDPRSKIWQ 120

Query: 1124 RLPPMPPVAKGEEPRKVLAGL-----------ADVIRNWLGRRDPLDRLPYCGCAIGAVD 978
            R+P MP     EE +K  + L           A+VIR +LG++D  D +P+CGCAIGAVD
Sbjct: 121  RMPNMPNFVNKEESKKGSSRLWMWNMVEGIRIAEVIRGFLGQKDAFDEMPFCGCAIGAVD 180

Query: 977  GCLYVLGGFSRASAVKCVWCFNPILNMWSEVESMSIGRAYCKTGVLKNKLYXXXXXXXXX 798
            GC+YVLGGFS+AS ++CVW F+PI N WS+V SMS GRAYCKTG+L NKLY         
Sbjct: 181  GCVYVLGGFSKASTMRCVWRFDPIQNTWSKVTSMSAGRAYCKTGILNNKLYVVGGVSQGQ 240

Query: 797  XGLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLCVPQ 618
             GL PLQSAEV+DP T  WS VPSMPFS+AQ+LP+AFLADMLKPIATG+T+Y GRLCVPQ
Sbjct: 241  AGLVPLQSAEVFDPSTDTWSHVPSMPFSRAQVLPSAFLADMLKPIATGLTSYMGRLCVPQ 300

Query: 617  SLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPSSSL 438
            SLYSWPFFVDVGGE+YDPE+N+W+EMP+GMGDGWPARQAGTKLSVVV+ ELYA DPS+S+
Sbjct: 301  SLYSWPFFVDVGGEIYDPETNSWIEMPAGMGDGWPARQAGTKLSVVVDGELYAFDPSNSM 360

Query: 437  DSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVLQAD 258
            DSG+IK+Y   +DAWKVV+GKVPI D  DSESPYLLAGF G+LHVITKD NHD+ VLQA 
Sbjct: 361  DSGRIKVYDQGEDAWKVVIGKVPIYDSADSESPYLLAGFHGKLHVITKDANHDIAVLQAG 420

Query: 257  PHNRSSSAP--APLIDSLGEQSDSLVESETD---IWKVIATMNFGSAELVSCQVLDI 102
              +   S+P  + L  S  ++S  L  +E+D   +W+V+A+ +FG AELVSCQV+DI
Sbjct: 421  LRDNLDSSPSLSTLSQSTLQESPELA-AESDAAVVWRVVASRDFGQAELVSCQVIDI 476


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