BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026320
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27227.3| unnamed protein product [Vitis vinifera]              157   3e-36
ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]    150   3e-34
ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine ...   129   7e-28
ref|XP_003638302.1| DNA polymerase eta [Medicago truncatula] gi|...   119   7e-25
ref|XP_004170496.1| PREDICTED: DNA polymerase eta-like [Cucumis ...   108   2e-21

>emb|CBI27227.3| unnamed protein product [Vitis vinifera]
          Length = 773

 Score =  157 bits (396), Expect = 3e-36
 Identities = 92/220 (41%), Positives = 126/220 (57%), Gaps = 4/220 (1%)
 Frame = -3

Query: 788  NARVYKTNXXXXXXXXXXXSCPLRYGTAKIQEDALKLFNSGLREFLGSYRAETSGNQNNK 609
            +AR YK+N           SCPLRYG AKIQEDAL LF +GLRE+LGS + +T  NQ + 
Sbjct: 363  HARAYKSNDSDSHKKFPSKSCPLRYGIAKIQEDALNLFQAGLREYLGSCKVKTRANQCSG 422

Query: 608  WGVTSLSVTAGKILATPLGTCSIMKYFQGKEPSCSLEEHICNETTQETQPASHSGTESCS 429
            W +T+LSV+A KI+A P GTCSIMKYF G++ S S  +   + +T+E    SHSG+ES  
Sbjct: 423  WSITALSVSASKIVAIPTGTCSIMKYFHGQDLSSSSLKQPQDRSTEEAASLSHSGSESYL 482

Query: 428  GGNATVLPKESSCKETKTNFSKFDLDQDGRTMDKLNSKGSSSILRFFHSRDPSCSSAEQA 249
            G N     K+   +ET+ N+   +LDQ  +       +G+ SILRFF   +P+ S +EQ 
Sbjct: 483  GLNPRETQKQFPGEETRINYDMPNLDQQEKKRKMWEDQGTPSILRFFKRHNPTSSLSEQE 542

Query: 248  CSGIIHDGEQIFPSG----SNICRELNQTEVQKTAVNSAT 141
                I D +    SG    S  C E  Q ++ K  + + T
Sbjct: 543  QVEPIQDTKVSSSSGLWTTSESCSETGQIQLPKEMMVAET 582


>ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]
          Length = 779

 Score =  150 bits (379), Expect = 3e-34
 Identities = 92/226 (40%), Positives = 126/226 (55%), Gaps = 10/226 (4%)
 Frame = -3

Query: 788  NARVYKTNXXXXXXXXXXXSCPLRYGTAKIQEDALKLFNSGLREFLGSYRAETSGNQNNK 609
            +AR YK+N           SCPLRYG AKIQEDAL LF +GLRE+LGS + +T  NQ + 
Sbjct: 363  HARAYKSNDSDSHKKFPSKSCPLRYGIAKIQEDALNLFQAGLREYLGSCKVKTRANQCSG 422

Query: 608  WGVTSLSVTAGKILATPLGTCSIMKYFQGKEPSCSLEEHICNETTQETQPASH------S 447
            W +T+LSV+A KI+A P GTCSIMKYF G++ S S  +   + +T+E    SH      S
Sbjct: 423  WSITALSVSASKIVAIPTGTCSIMKYFHGQDLSSSSLKQPQDRSTEEAASLSHSDWGVYS 482

Query: 446  GTESCSGGNATVLPKESSCKETKTNFSKFDLDQDGRTMDKLNSKGSSSILRFFHSRDPSC 267
            G+ES  G N     K+   +ET+ N+   +LDQ  +       +G+ SILRFF   +P+ 
Sbjct: 483  GSESYLGLNPRETQKQFPGEETRINYDMPNLDQQEKKRKMWEDQGTPSILRFFKRHNPTS 542

Query: 266  SSAEQACSGIIHDGEQIFPSG----SNICRELNQTEVQKTAVNSAT 141
            S +EQ     I D +    SG    S  C E  Q ++ K  + + T
Sbjct: 543  SLSEQEQVEPIQDTKVSSSSGLWTTSESCSETGQIQLPKEMMVAET 588


>ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine max]
          Length = 703

 Score =  129 bits (324), Expect = 7e-28
 Identities = 90/246 (36%), Positives = 127/246 (51%), Gaps = 11/246 (4%)
 Frame = -3

Query: 788  NARVYKTNXXXXXXXXXXXSCPLRYGTAKIQEDALKLFNSGLREFLGSYRAETSGNQNNK 609
            +AR YKT            SCPLRYGT KIQEDAL LF +GLR+FLG Y  +  GN+NN 
Sbjct: 364  HARAYKTGDSDSHRKFPSKSCPLRYGTRKIQEDALILFQAGLRDFLGFYNCKAHGNENNN 423

Query: 608  WGVTSLSVTAGKILATPLGTCSIMKYFQGKEPSCSLEEHICNETTQETQPASHSGTESCS 429
            WGVTSLSV+A K+++ P GT SI+KYF G  PS S      +    E  P+S SG+ +CS
Sbjct: 424  WGVTSLSVSASKLVSIPSGTHSIVKYFGGSFPSSSTSNQSLDVVIDEAAPSSPSGSGNCS 483

Query: 428  GGNATVLPKESSCKETKTNFSKFDLDQDGRTMDKLNSKGSSSILRFFHSRDPSCSSAEQA 249
            G    ++P E            F+L+    T      K S + L     +DP C  + +A
Sbjct: 484  G----LVPNE------------FELEYPEDT----GMKDSKACL---DQQDPLCHLSCKA 520

Query: 248  CSGIIHDGEQIFPSGS-------NICRELNQTEVQKTAVNSATHGLRQ----GEPKRGTS 102
              G+  +   + PSGS          R+L  T++++ +  S+   + +    G+  +G  
Sbjct: 521  -DGLTEESSLVSPSGSEDRILHNEPHRDLPATDLRRVSNISSLKAVGKKKTAGKKLQGNC 579

Query: 101  SILKFF 84
            SI+ FF
Sbjct: 580  SIVHFF 585


>ref|XP_003638302.1| DNA polymerase eta [Medicago truncatula]
           gi|355504237|gb|AES85440.1| DNA polymerase eta [Medicago
           truncatula]
          Length = 543

 Score =  119 bits (298), Expect = 7e-25
 Identities = 68/147 (46%), Positives = 85/147 (57%)
 Frame = -3

Query: 788 NARVYKTNXXXXXXXXXXXSCPLRYGTAKIQEDALKLFNSGLREFLGSYRAETSGNQNNK 609
           +AR YK             SCPLRYGT KIQEDAL LF SGLR+FLG Y ++T+G++ NK
Sbjct: 364 HARAYKKGDSDSHKKFPSKSCPLRYGTTKIQEDALTLFQSGLRDFLGLYNSKTNGSE-NK 422

Query: 608 WGVTSLSVTAGKILATPLGTCSIMKYFQGKEPSCSLEEHICNETTQETQPASHSGTESCS 429
           WG+T+LSV+A KI+  P GT SI KYF    P  S      +    E  P+S SG+E+C 
Sbjct: 423 WGITALSVSASKIVPIPSGTHSITKYFSETFPHGSSSNQSVDNVIDEVAPSSPSGSENCM 482

Query: 428 GGNATVLPKESSCKETKTNFSKFDLDQ 348
           G     L  E   ++T  N  K  LDQ
Sbjct: 483 GVIPNELQLECPEEDTGVNHPKACLDQ 509


>ref|XP_004170496.1| PREDICTED: DNA polymerase eta-like [Cucumis sativus]
          Length = 557

 Score =  108 bits (269), Expect = 2e-21
 Identities = 61/137 (44%), Positives = 79/137 (57%)
 Frame = -3

Query: 788 NARVYKTNXXXXXXXXXXXSCPLRYGTAKIQEDALKLFNSGLREFLGSYRAETSGNQNNK 609
           +A  Y+ +           SCPLRYG AKIQEDAL LF +GLR++LGSYRA   G+ NN 
Sbjct: 364 HATAYRLSDSDSHKKFPSKSCPLRYGAAKIQEDALNLFKAGLRDYLGSYRANILGDSNNG 423

Query: 608 WGVTSLSVTAGKILATPLGTCSIMKYFQGKEPSCSLEEHICNETTQETQPASHSGTESCS 429
           W +TSLSV+A KI+  P G CSI KY   +  SC+  E   +   QET  A HSG  + S
Sbjct: 424 WRITSLSVSASKIMTIPSGMCSITKYLHVQHSSCTSSEQPQDNDIQET--ALHSGCTNYS 481

Query: 428 GGNATVLPKESSCKETK 378
             ++     E + +E K
Sbjct: 482 VMDSNEAHDERTGEEMK 498