BLASTX nr result

ID: Coptis25_contig00026304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026304
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262672.1| PREDICTED: oxygen-independent coproporphyrin...   614   e-173
ref|XP_002318108.1| predicted protein [Populus trichocarpa] gi|2...   598   e-168
ref|XP_002511254.1| coproporphyrinigen III oxidase, putative [Ri...   597   e-168
ref|XP_002866546.1| hypothetical protein ARALYDRAFT_496512 [Arab...   591   e-166
ref|NP_201134.1| oxygen-independent coproporphyrinogen III oxida...   590   e-166

>ref|XP_002262672.1| PREDICTED: oxygen-independent coproporphyrinogen-III oxidase-like
            protein sll1917 [Vitis vinifera]
          Length = 473

 Score =  614 bits (1584), Expect = e-173
 Identities = 305/439 (69%), Positives = 365/439 (83%), Gaps = 3/439 (0%)
 Frame = +3

Query: 84   VRENVSNNLITSINPLS-PPTSAYIHLPFCRKRCHYCDFPIVALGSM--NQFEDDPRIIN 254
            VR+N S+N  T+  P + PP SAYIHLPFCRKRCHYCDFPIVALGS      EDDPRI+N
Sbjct: 37   VRKNDSHNPSTTTPPHNLPPVSAYIHLPFCRKRCHYCDFPIVALGSSFTPPPEDDPRILN 96

Query: 255  YVQLICREIKATKPISTTNPPLETLFFGGGTPSLVPPKLVSSIIQVLKENFGVCSNAEIS 434
            Y QLICREI+ATKP     PPLET+FFGGGTPSLVPP+LVS I++ L+  FG+C +AE+S
Sbjct: 97   YTQLICREIEATKPECYPTPPLETVFFGGGTPSLVPPRLVSDIVEALRLKFGLCLDAEMS 156

Query: 435  IEMDPGTFDEMKMRELLELGVNRVSLGVQAFQQELLKKCGRAHGLEEVHDAIGIVKSSGL 614
            +EMDPGTFD  K++ L+ELGVNRVSLGVQAFQ+E+L+ CGRAHG++E+++AI  VKS G+
Sbjct: 157  MEMDPGTFDAEKLKGLMELGVNRVSLGVQAFQEEMLRGCGRAHGVKEIYEAIETVKSCGV 216

Query: 615  ENWSLDLISSLPHQTLEMWEESLELAVKASPTHVSVYDLQVEQGTKFGNLYTPGEFPLPS 794
            ENWS+DLISSLPHQT EMWEESL+L ++A PTHVSVYDLQVEQGTKFG LYTPGEFPLPS
Sbjct: 217  ENWSVDLISSLPHQTPEMWEESLQLVIEAQPTHVSVYDLQVEQGTKFGILYTPGEFPLPS 276

Query: 795  ETQSAEFYKMASKTLSKAGYEHYEISSYCKKGYMCKHNVTYWQNRAFYGFGLGSASYLGG 974
            E QSA+FY+MAS TLS AGY HYEISSYCK G+ CKHN+TYW+N+ FYGFGLGSASY+GG
Sbjct: 277  EIQSADFYRMASTTLSNAGYNHYEISSYCKGGFECKHNLTYWENKPFYGFGLGSASYVGG 336

Query: 975  MRFSRPKKMKEYMGYVQDLEDGLVLNYQENIHVDTKDLAMDVVMLSLRTSVGLHLKSFGE 1154
            +RFSRP+KMKEYMGYVQ LE  +V     +  VD KD+AMDVVMLSLRT+ GL LKSF  
Sbjct: 337  VRFSRPRKMKEYMGYVQSLETEVVGCGGNS--VDAKDVAMDVVMLSLRTARGLDLKSFRN 394

Query: 1155 SFGSSLVSSLCKTFQPHVASGHVVPLDVKQISLNADEFNSILSDEGKIEDVVAYIRLSDP 1334
            SFGSS V+SLC  ++P+V SGHVV LD ++  + +DEF+S+LS +  IE+ +A++RLSDP
Sbjct: 395  SFGSSFVASLCMAYRPYVKSGHVVCLDEQRRPVTSDEFSSLLSKDDGIEERLAFVRLSDP 454

Query: 1335 EGFLLSNELISSAFGVIAP 1391
            +GFLLSNELIS AF  IAP
Sbjct: 455  DGFLLSNELISLAFQAIAP 473


>ref|XP_002318108.1| predicted protein [Populus trichocarpa] gi|222858781|gb|EEE96328.1|
            predicted protein [Populus trichocarpa]
          Length = 439

 Score =  598 bits (1541), Expect = e-168
 Identities = 289/419 (68%), Positives = 349/419 (83%)
 Frame = +3

Query: 135  PPTSAYIHLPFCRKRCHYCDFPIVALGSMNQFEDDPRIINYVQLICREIKATKPISTTNP 314
            PPTSAYIHLPFCRKRCHYCDFPIVALGS N  ++DPRI NY++L+ REI +T+    T P
Sbjct: 22   PPTSAYIHLPFCRKRCHYCDFPIVALGSTNPTDNDPRISNYIELLQREIVSTRSDFDTIP 81

Query: 315  PLETLFFGGGTPSLVPPKLVSSIIQVLKENFGVCSNAEISIEMDPGTFDEMKMRELLELG 494
            PLET+FFGGGTPSLV P++V SI+  L+  FGVC  AEIS+EMDPGTFD  K+++L+ +G
Sbjct: 82   PLETVFFGGGTPSLVSPRMVLSILDTLRVKFGVCEGAEISMEMDPGTFDGRKVKDLMGMG 141

Query: 495  VNRVSLGVQAFQQELLKKCGRAHGLEEVHDAIGIVKSSGLENWSLDLISSLPHQTLEMWE 674
            VNRVSLGVQAFQ+ELLK CGRAHG++EV++AI I+ S G+ENWS+DLISSLP QT +MWE
Sbjct: 142  VNRVSLGVQAFQEELLKSCGRAHGVKEVYEAIEILGSCGVENWSVDLISSLPLQTPQMWE 201

Query: 675  ESLELAVKASPTHVSVYDLQVEQGTKFGNLYTPGEFPLPSETQSAEFYKMASKTLSKAGY 854
            ESL L ++A P HVSVYDLQVEQGTKFG LYTPGEFPLP ETQSAEFY+MAS+ L+  GY
Sbjct: 202  ESLRLTIEARPKHVSVYDLQVEQGTKFGALYTPGEFPLPCETQSAEFYRMASRMLADVGY 261

Query: 855  EHYEISSYCKKGYMCKHNVTYWQNRAFYGFGLGSASYLGGMRFSRPKKMKEYMGYVQDLE 1034
             HYEISSYC+ GY CKHN TYW+N+ FYGFGLGSASYL G+RFSRP+KMKEYMGYV++LE
Sbjct: 262  RHYEISSYCEDGYECKHNYTYWKNKPFYGFGLGSASYLNGLRFSRPRKMKEYMGYVENLE 321

Query: 1035 DGLVLNYQENIHVDTKDLAMDVVMLSLRTSVGLHLKSFGESFGSSLVSSLCKTFQPHVAS 1214
            +G V+NY  N  VD KDLA+D+VMLSLRT+ GL L+SF E+FG SLV SLCK +QP++ S
Sbjct: 322  NG-VVNYCGNNLVDAKDLAVDIVMLSLRTARGLDLRSFAEAFGGSLVHSLCKVYQPYIES 380

Query: 1215 GHVVPLDVKQISLNADEFNSILSDEGKIEDVVAYIRLSDPEGFLLSNELISSAFGVIAP 1391
            GHVV LD ++ ++  DEFN++  +E +I   ++YIRLSDP+GFLLSNELIS AF VI P
Sbjct: 381  GHVVCLDEERRAMTVDEFNTLFLNEDEIAKGLSYIRLSDPDGFLLSNELISLAFRVIDP 439


>ref|XP_002511254.1| coproporphyrinigen III oxidase, putative [Ricinus communis]
            gi|223550369|gb|EEF51856.1| coproporphyrinigen III
            oxidase, putative [Ricinus communis]
          Length = 478

 Score =  597 bits (1538), Expect = e-168
 Identities = 302/475 (63%), Positives = 363/475 (76%), Gaps = 12/475 (2%)
 Frame = +3

Query: 3    FKPIFATIPKKL--------KIXXXXXXXXXXXXXVRENVSNNLITSINPLS----PPTS 146
            F PIF+T P K                        V +N S    T+ NP      PPTS
Sbjct: 6    FTPIFSTFPTKSFTTLQKFPPFPTITNTFTQSPQPVHQNASLTAPTT-NPFHQHDHPPTS 64

Query: 147  AYIHLPFCRKRCHYCDFPIVALGSMNQFEDDPRIINYVQLICREIKATKPISTTNPPLET 326
            AYIHLPFCRKRCHYCDFPIVALGS N  E DPRI NY +L+ +EI +TKP S +  PL+T
Sbjct: 65   AYIHLPFCRKRCHYCDFPIVALGSSNPTETDPRISNYAELLQQEILSTKPNSDSYSPLQT 124

Query: 327  LFFGGGTPSLVPPKLVSSIIQVLKENFGVCSNAEISIEMDPGTFDEMKMRELLELGVNRV 506
            +FFGGGTPSLV P++VSSI+  LK  FG+C NAEIS+EMDPGTFD+ KM EL+ LGVNR+
Sbjct: 125  VFFGGGTPSLVSPRIVSSILDTLKLKFGLCKNAEISMEMDPGTFDDKKMEELMGLGVNRI 184

Query: 507  SLGVQAFQQELLKKCGRAHGLEEVHDAIGIVKSSGLENWSLDLISSLPHQTLEMWEESLE 686
            SLGVQAFQ ELLK CGRAHG+EEV+ AI I++S G+ NWSLDLISSLPHQT +MWE+SL 
Sbjct: 185  SLGVQAFQDELLKACGRAHGIEEVYQAIEIIRSCGIGNWSLDLISSLPHQTPQMWEQSLS 244

Query: 687  LAVKASPTHVSVYDLQVEQGTKFGNLYTPGEFPLPSETQSAEFYKMASKTLSKAGYEHYE 866
            L V+A P HVSVYDLQVEQ TKFG LYTPGEFPLPSE QSA++Y+MAS+ LS AGY HYE
Sbjct: 245  LTVQAQPKHVSVYDLQVEQETKFGILYTPGEFPLPSEIQSADYYRMASRMLSDAGYSHYE 304

Query: 867  ISSYCKKGYMCKHNVTYWQNRAFYGFGLGSASYLGGMRFSRPKKMKEYMGYVQDLEDGLV 1046
            ISSYCK G+ CKHN  YW+N+ FYGFGLGSASY+ G+RFSRP+KM+EYM YVQ+LE+G V
Sbjct: 305  ISSYCKDGFECKHNFIYWKNKPFYGFGLGSASYVNGVRFSRPRKMREYMNYVQNLENGTV 364

Query: 1047 LNYQENIHVDTKDLAMDVVMLSLRTSVGLHLKSFGESFGSSLVSSLCKTFQPHVASGHVV 1226
             +   N + D KDLA+DVVMLS RT+ GL L+SF ++FGSSLV SLCK ++P++ S H+V
Sbjct: 365  -DCSGNGNRDAKDLALDVVMLSFRTARGLDLRSFADAFGSSLVYSLCKVYKPYIESRHMV 423

Query: 1227 PLDVKQISLNADEFNSILSDEGKIEDVVAYIRLSDPEGFLLSNELISSAFGVIAP 1391
             LD ++ ++ ADEFN++ + E +I   +AYIRLSDP+GFLLSNELIS AFGVIAP
Sbjct: 424  GLDKERRAMTADEFNTLFTCEDEIGSRLAYIRLSDPDGFLLSNELISLAFGVIAP 478


>ref|XP_002866546.1| hypothetical protein ARALYDRAFT_496512 [Arabidopsis lyrata subsp.
            lyrata] gi|297312381|gb|EFH42805.1| hypothetical protein
            ARALYDRAFT_496512 [Arabidopsis lyrata subsp. lyrata]
          Length = 484

 Score =  591 bits (1524), Expect = e-166
 Identities = 292/448 (65%), Positives = 352/448 (78%), Gaps = 13/448 (2%)
 Frame = +3

Query: 87   RENVSNNLITSINPLSPPTSAYIHLPFCRKRCHYCDFPIVALGSMNQF------------ 230
            R N S NL T      PPTSAY+HLPFCRKRCHYCDFPI+ALG+ +              
Sbjct: 40   RRNASTNLTTLHQ--GPPTSAYVHLPFCRKRCHYCDFPILALGTSSSSLTSPSNVYEEGK 97

Query: 231  EDDPRIINYVQLICREIKATKPISTTNPPLETLFFGGGTPSLVPPKLVSSIIQVLKENFG 410
            EDDPRI NYV L+ REI+AT+    TNP LET+FFGGGTPSLVPPKLVS I++ L  NFG
Sbjct: 98   EDDPRITNYVNLLVREIQATRTDYDTNPNLETVFFGGGTPSLVPPKLVSLILETLSLNFG 157

Query: 411  VCSNAEISIEMDPGTFDEMKMRELLELGVNRVSLGVQAFQQELLKKCGRAHGLEEVHDAI 590
            +  +AEIS+EMDPGTFD  K++EL++LGVNRVSLGVQAFQ ELLK CGRAHG+ +V++AI
Sbjct: 158  LSPDAEISMEMDPGTFDGQKLKELMKLGVNRVSLGVQAFQDELLKACGRAHGVSQVYEAI 217

Query: 591  GIVKSSGLENWSLDLISSLPHQTLEMWEESLELAVKASPTHVSVYDLQVEQGTKFGNLYT 770
              VK  G+ENWS+DLISSLPHQTLEMWEESL LA+++ P HVSVYDLQVEQGTKFGNLYT
Sbjct: 218  EFVKECGVENWSMDLISSLPHQTLEMWEESLRLAIESQPNHVSVYDLQVEQGTKFGNLYT 277

Query: 771  PGEFPLPSETQSAEFYKMASKTLSKAGYEHYEISSYCKKGYMCKHNVTYWQNRAFYGFGL 950
            PG+ PLPSETQSAEFYK AS  L  AGYEHYE+SSY K G+ CKHN+ YW+N+ FY FGL
Sbjct: 278  PGQSPLPSETQSAEFYKTASSMLRGAGYEHYEVSSYSKDGFKCKHNLKYWKNKPFYAFGL 337

Query: 951  GSASYLGGMRFSRPKKMKEYMGYVQDLEDGLVLNYQENIHVDTKDLAMDVVMLSLRTSVG 1130
            GSASY+GG+RFSRP+++KEY  YV DLE+G   N+  N  VD KD+A D++MLS RTS G
Sbjct: 338  GSASYVGGLRFSRPRRLKEYTNYVADLENG-AANWCGNGDVDLKDVATDILMLSFRTSKG 396

Query: 1131 LHLKSFGESFGSSLVSSLCKTFQPHVASGHVVPLDVKQISLNADEFNSIL-SDEGKIEDV 1307
            L LK FGE+FGS +V S+CK ++P+V SGH+V LD  +  + +DEF +++ +DE +IED 
Sbjct: 397  LELKEFGEAFGSEVVKSICKVYEPYVESGHIVCLDDMRSEVMSDEFQTLVANDEVEIEDH 456

Query: 1308 VAYIRLSDPEGFLLSNELISSAFGVIAP 1391
            V Y+RL DP+GFLLSNELIS AFGV+AP
Sbjct: 457  VRYLRLKDPDGFLLSNELISLAFGVVAP 484


>ref|NP_201134.1| oxygen-independent coproporphyrinogen III oxidase [Arabidopsis
            thaliana] gi|10177310|dbj|BAB10571.1| oxygen-independent
            coproporphyrinogen-like protein [Arabidopsis thaliana]
            gi|115311487|gb|ABI93924.1| At5g63290 [Arabidopsis
            thaliana] gi|332010345|gb|AED97728.1| oxygen-independent
            coproporphyrinogen III oxidase [Arabidopsis thaliana]
          Length = 484

 Score =  590 bits (1520), Expect = e-166
 Identities = 291/447 (65%), Positives = 350/447 (78%), Gaps = 12/447 (2%)
 Frame = +3

Query: 87   RENVSNNLITSINPLSPPTSAYIHLPFCRKRCHYCDFPIVALGSMNQF-----------E 233
            R N S NL T      PPTSAY+HLPFCRKRCHYCDFPI+ALG  +             E
Sbjct: 41   RRNASTNLTTLHK--GPPTSAYVHLPFCRKRCHYCDFPILALGMSSSSARPSNVYEEGKE 98

Query: 234  DDPRIINYVQLICREIKATKPISTTNPPLETLFFGGGTPSLVPPKLVSSIIQVLKENFGV 413
            DDPRI NYV L+ REIKAT+    TNP LET+FFGGGTPSLVPPKLVS I++ L  NFG+
Sbjct: 99   DDPRITNYVNLLVREIKATRTDFDTNPNLETVFFGGGTPSLVPPKLVSLILETLSLNFGL 158

Query: 414  CSNAEISIEMDPGTFDEMKMRELLELGVNRVSLGVQAFQQELLKKCGRAHGLEEVHDAIG 593
              +AEIS+EMDPGTFD  K+++L++LGVNRVSLGVQAFQ ELLK CGRAHG+ +V++AI 
Sbjct: 159  SPDAEISMEMDPGTFDGQKLKDLMKLGVNRVSLGVQAFQDELLKACGRAHGVSQVYEAIE 218

Query: 594  IVKSSGLENWSLDLISSLPHQTLEMWEESLELAVKASPTHVSVYDLQVEQGTKFGNLYTP 773
             VK  G+ENWS+DLISSLPHQTLEMWEESL LA+++ P HVSVYDLQVEQGTKFGNLYTP
Sbjct: 219  FVKECGVENWSMDLISSLPHQTLEMWEESLRLAIESQPNHVSVYDLQVEQGTKFGNLYTP 278

Query: 774  GEFPLPSETQSAEFYKMASKTLSKAGYEHYEISSYCKKGYMCKHNVTYWQNRAFYGFGLG 953
            G+ PLPSETQSAEFYK AS  L  AGYEHYE+SSY + G+ CKHN+ YW+N+ FY FGLG
Sbjct: 279  GQSPLPSETQSAEFYKTASSMLRGAGYEHYEVSSYSRDGFKCKHNLIYWKNKPFYAFGLG 338

Query: 954  SASYLGGMRFSRPKKMKEYMGYVQDLEDGLVLNYQENIHVDTKDLAMDVVMLSLRTSVGL 1133
            SASY+GG+RFSRP+++KEY  YV DLE+G   N+  N  VD KD+A D++MLS RTS GL
Sbjct: 339  SASYVGGLRFSRPRRLKEYTNYVADLENG-AANWCGNGDVDLKDVATDILMLSFRTSKGL 397

Query: 1134 HLKSFGESFGSSLVSSLCKTFQPHVASGHVVPLDVKQISLNADEFNSIL-SDEGKIEDVV 1310
             LK FGE+FGS +V S+CK ++P+V SGH+V LD  +  +  DEF +++ +DE KIED V
Sbjct: 398  ELKEFGEAFGSEVVKSICKVYEPYVESGHIVCLDDMRSEVMIDEFKTLVANDEVKIEDHV 457

Query: 1311 AYIRLSDPEGFLLSNELISSAFGVIAP 1391
             Y+RL DP+GFLLSNELIS +FGV+AP
Sbjct: 458  RYLRLKDPDGFLLSNELISLSFGVVAP 484


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