BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026300
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   146   7e-33
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   140   4e-31
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   138   2e-30
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...   135   2e-29
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...   133   7e-29

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  146 bits (369), Expect = 7e-33
 Identities = 107/284 (37%), Positives = 149/284 (52%), Gaps = 17/284 (5%)
 Frame = -2

Query: 980 GSCNGLICLSNFKTFISLWNPSIREFVQLSCDDPVIKNEL--------CGV-VMGFGYDG 828
           GS NGL+C+SN    I++WNPS R+   +    P +  EL        C V V GFGYD 
Sbjct: 100 GSVNGLLCISNVVDDIAVWNPSTRKHRVV----PFLPIELKRYFGTKSCSVYVFGFGYDS 155

Query: 827 VCEKYKLVRIEYFYDLDGSDFMTDFNRVEVKVYTLGSNVWRLVDDTP-CCYIGNINRVAH 651
           V + YKLVRI  F    G      F   EVKVY+L    WR + D P C +    N V  
Sbjct: 156 VRDDYKLVRIAQF----GGGGKRSFES-EVKVYSLRKQSWRRIGDMPYCVHYPGANGV-F 209

Query: 650 VDGVLYWIGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDRSYRDLGLGVLRGSLCTFS 471
            +G L+W+            +V+ DL  E + EV  P ++D+++  + LGVLRG LC  +
Sbjct: 210 ANGALHWVVGENPESNVANIVVALDLGVEDYREVLQPEYKDKNFY-IDLGVLRGCLCFLA 268

Query: 470 FHL-ERVDIWMIKNYGVKGTWTKHFSIAR-----STKHLEPLFLLKSG-EILLQMGLGSL 312
             L ERVD+WM+K YGVK +WTK FS+A+       + L+PL   KSG E+L++     L
Sbjct: 269 NFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDL 328

Query: 311 LFYDPASDLTKAPSVSGIPDRFRTSTYVESLVPIASLMGMPGNS 180
            +YD      K   + GIP  F   T+VESL+ ++    + G +
Sbjct: 329 CWYDLKRKQVK-NRIPGIPYSFEADTFVESLISVSPNRHLDGRT 371


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score =  140 bits (354), Expect = 4e-31
 Identities = 98/301 (32%), Positives = 147/301 (48%), Gaps = 17/301 (5%)
 Frame = -2

Query: 980 GSCNGLICLSNFKTFISLWNPSIREFVQLSCDDPVIKNE----------LCGVVMGFGYD 831
           GSCNGL+C+ N    I+ WNP+IR+  ++   +P+I+ E          L   V GFGYD
Sbjct: 90  GSCNGLLCICNIADDIAFWNPTIRKH-RIIPSEPLIRKETNENNTITTLLAAHVYGFGYD 148

Query: 830 GVCEKYKLVRIEYFYDLDGSDFMTDFNRVEVKVYTLGSNVWRLVDDTPCCYIGNINRVAH 651
              + YKLV I YF DL    F +      VK+YT+ ++VW+ +   P            
Sbjct: 149 SATDDYKLVSISYFVDLHNRSFDS-----HVKIYTMRTDVWKTLPSMPYALCCARTMGVF 203

Query: 650 VDGVLYWIGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDRSYRDLGLGVLRGSLCTFS 471
           V G L+W+  R +   S   IV+FDLR E F EV+ P   D  + D+ + +LRG LC   
Sbjct: 204 VSGALHWVVTRDLEPESRDLIVAFDLRFEVFREVALPGTVDGKF-DMDVALLRGMLCIIE 262

Query: 470 FH-LERVDIWMIKNYGVKGTWTKHFSI-----ARSTKHLEPLFLLKSGE-ILLQMGLGSL 312
               +  D+W+++ YG   +W K F++      +  K L+PL   ++G+ +L +     L
Sbjct: 263 NRGSDGFDVWVMREYGSHDSWCKMFTVGQPRDVKLMKSLKPLGYSRNGDKVLFEQDSKKL 322

Query: 311 LFYDPASDLTKAPSVSGIPDRFRTSTYVESLVPIASLMGMPGNSLATTISTGIKNKLHEE 132
            +Y+ AS       +SGIP+    +  V SLV  + +M     S         K KL EE
Sbjct: 323 CWYNLASKDVSWVRISGIPNSIEGTVCVGSLVKPSLMMNRSVQSK--------KQKLVEE 374

Query: 131 K 129
           K
Sbjct: 375 K 375


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  138 bits (347), Expect = 2e-30
 Identities = 98/273 (35%), Positives = 142/273 (52%), Gaps = 16/273 (5%)
 Frame = -2

Query: 980 GSCNGLICLSNFKTFISLWNPSIREFVQLSCDDPVIKNEL--------CGV-VMGFGYDG 828
           GSCNGL+C+ N    I+LWNPSIR    +    P +  EL        C V V GFGYD 
Sbjct: 93  GSCNGLLCICNIVDDIALWNPSIRAHRVV----PYLPVELKRYFGMCSCRVSVFGFGYDL 148

Query: 827 VCEKYKLVRIEYFYDLDGSDFMTDFNRVEVKVYTLGSNVWRLVDDTPCCYIGNINRVAHV 648
             + YKLVRI  F  +D   F +     EVKV++L  N WR + D P C +       + 
Sbjct: 149 SNDDYKLVRIAQFGGVDRKSFES-----EVKVFSLRKNSWRRIADMPYCVLYPGENGIYA 203

Query: 647 DGVLYWIGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDRSYRDLGLGVLRGSLCTFSF 468
           +G L+W+  +        +IV+ DL  E +  V  P F D +  ++G+GVL+G L   ++
Sbjct: 204 NGALHWLVSQDPDSTVADTIVALDLGVEDYHVVPKPEFVDMNC-NMGVGVLQGCLSLLAY 262

Query: 467 -HLERVDIWMIKNYGVKGTWTKHFSIAR-----STKHLEPLFLLKSG-EILLQMGLGSLL 309
              ERVD+W+++ Y VK +W+K FS+AR       + L+PL   KSG E+L++    +L 
Sbjct: 263 ARSERVDVWVMEEYMVKESWSKLFSVARLEVIGILRSLKPLAYSKSGNEVLIEHDNVNLF 322

Query: 308 FYDPASDLTKAPSVSGIPDRFRTSTYVESLVPI 210
           +YD          + G+P  F     V SLVP+
Sbjct: 323 WYDLKRKEVVNVWIQGVPITFEAEICVGSLVPL 355


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score =  135 bits (340), Expect = 2e-29
 Identities = 89/264 (33%), Positives = 129/264 (48%), Gaps = 9/264 (3%)
 Frame = -2

Query: 980 GSCNGLICLSNFKTFISLWNPSIREFVQLSCDDPVIKNEL---CGVVMGFGYDGVCEKYK 810
           GSCNGL+C +     + LWNPSIR    +S   P + N     C    G GYD V E YK
Sbjct: 150 GSCNGLLCFAIKGDCVLLWNPSIR----VSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYK 205

Query: 809 LVRIEYFYDLDGSDFMTDFNRVEVKVYTLGSNVWRLVDDTPCCYIGNINRVAHVDGVLYW 630
           +V +      D S++   F   +VKVY++ +N WR + D P  ++   N    V G L W
Sbjct: 206 VVAVF----CDPSEY---FIECKVKVYSMATNSWRKIQDFPHGFLPFQNSGKFVSGTLNW 258

Query: 629 IGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDRSYRDLGLGVLRGSLC-TFSFHLERV 453
                +G  S+  IVS DL  E + EV  P +E        LGVL+G LC  + +     
Sbjct: 259 AANHSIGPSSFWVIVSLDLHKETYREVLPPDYEKEDCSTPSLGVLQGCLCMNYDYKKTHF 318

Query: 452 DIWMIKNYGVKGTWTKHFSI-----ARSTKHLEPLFLLKSGEILLQMGLGSLLFYDPASD 288
            +WM+K+YGV+ +W K  SI          +  P ++ ++G++LL      L+ YDP ++
Sbjct: 319 VVWMMKDYGVRESWVKLVSIPYVPNPEDFSYSGPYYISENGKVLLMFEF-DLILYDPRNN 377

Query: 287 LTKAPSVSGIPDRFRTSTYVESLV 216
             K P +      F    YVE+LV
Sbjct: 378 SFKYPKIESGKGWFDAEVYVETLV 401


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score =  133 bits (334), Expect = 7e-29
 Identities = 89/264 (33%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
 Frame = -2

Query: 980 GSCNGLICLSNFKTFISLWNPSIREFVQLSCDDPVIKNEL---CGVVMGFGYDGVCEKYK 810
           GSCNGL+C +     + LWNPSIR    +S   P + N     C    G GYD V E YK
Sbjct: 149 GSCNGLLCFAIKGDCVLLWNPSIR----VSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYK 204

Query: 809 LVRIEYFYDLDGSDFMTDFNRVEVKVYTLGSNVWRLVDDTPCCYIGNINRVAHVDGVLYW 630
           +V +      D S++   F   +VKVY++ +N WR + D P  +    N    V G L W
Sbjct: 205 VVAVF----CDPSEY---FIECKVKVYSMATNSWRKIQDFPHGFSPFQNSGKFVSGTLNW 257

Query: 629 IGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDRSYRDLGLGVLRGSLC-TFSFHLERV 453
                +G  S   IVS DL  E + EV  P +E       GLGVL+G LC  + +     
Sbjct: 258 AANHSIGSSSLWVIVSLDLHKETYREVLPPDYEKEDCSTPGLGVLQGCLCMNYDYKKTHF 317

Query: 452 DIWMIKNYGVKGTWTKHFSI-----ARSTKHLEPLFLLKSGEILLQMGLGSLLFYDPASD 288
            +WM+K+YG + +W K  SI       +  +  P ++ ++GE+LL      L+ Y+P  +
Sbjct: 318 VVWMMKDYGARESWVKLVSIPYVPNPENFSYSGPYYISENGEVLLMFEF-DLILYNPRDN 376

Query: 287 LTKAPSVSGIPDRFRTSTYVESLV 216
             K P +      F    YVE+LV
Sbjct: 377 SFKYPKIESGKGWFDAEVYVETLV 400