BLASTX nr result
ID: Coptis25_contig00026300
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00026300 (981 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g... 146 7e-33 ref|XP_003610528.1| F-box family protein [Medicago truncatula] g... 140 4e-31 ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ... 138 2e-30 ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin... 135 2e-29 ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23... 133 7e-29 >ref|XP_002308787.1| f-box family protein [Populus trichocarpa] gi|222854763|gb|EEE92310.1| f-box family protein [Populus trichocarpa] Length = 396 Score = 146 bits (369), Expect = 7e-33 Identities = 107/284 (37%), Positives = 149/284 (52%), Gaps = 17/284 (5%) Frame = -2 Query: 980 GSCNGLICLSNFKTFISLWNPSIREFVQLSCDDPVIKNEL--------CGV-VMGFGYDG 828 GS NGL+C+SN I++WNPS R+ + P + EL C V V GFGYD Sbjct: 100 GSVNGLLCISNVVDDIAVWNPSTRKHRVV----PFLPIELKRYFGTKSCSVYVFGFGYDS 155 Query: 827 VCEKYKLVRIEYFYDLDGSDFMTDFNRVEVKVYTLGSNVWRLVDDTP-CCYIGNINRVAH 651 V + YKLVRI F G F EVKVY+L WR + D P C + N V Sbjct: 156 VRDDYKLVRIAQF----GGGGKRSFES-EVKVYSLRKQSWRRIGDMPYCVHYPGANGV-F 209 Query: 650 VDGVLYWIGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDRSYRDLGLGVLRGSLCTFS 471 +G L+W+ +V+ DL E + EV P ++D+++ + LGVLRG LC + Sbjct: 210 ANGALHWVVGENPESNVANIVVALDLGVEDYREVLQPEYKDKNFY-IDLGVLRGCLCFLA 268 Query: 470 FHL-ERVDIWMIKNYGVKGTWTKHFSIAR-----STKHLEPLFLLKSG-EILLQMGLGSL 312 L ERVD+WM+K YGVK +WTK FS+A+ + L+PL KSG E+L++ L Sbjct: 269 NFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDL 328 Query: 311 LFYDPASDLTKAPSVSGIPDRFRTSTYVESLVPIASLMGMPGNS 180 +YD K + GIP F T+VESL+ ++ + G + Sbjct: 329 CWYDLKRKQVK-NRIPGIPYSFEADTFVESLISVSPNRHLDGRT 371 >ref|XP_003610528.1| F-box family protein [Medicago truncatula] gi|355511583|gb|AES92725.1| F-box family protein [Medicago truncatula] Length = 392 Score = 140 bits (354), Expect = 4e-31 Identities = 98/301 (32%), Positives = 147/301 (48%), Gaps = 17/301 (5%) Frame = -2 Query: 980 GSCNGLICLSNFKTFISLWNPSIREFVQLSCDDPVIKNE----------LCGVVMGFGYD 831 GSCNGL+C+ N I+ WNP+IR+ ++ +P+I+ E L V GFGYD Sbjct: 90 GSCNGLLCICNIADDIAFWNPTIRKH-RIIPSEPLIRKETNENNTITTLLAAHVYGFGYD 148 Query: 830 GVCEKYKLVRIEYFYDLDGSDFMTDFNRVEVKVYTLGSNVWRLVDDTPCCYIGNINRVAH 651 + YKLV I YF DL F + VK+YT+ ++VW+ + P Sbjct: 149 SATDDYKLVSISYFVDLHNRSFDS-----HVKIYTMRTDVWKTLPSMPYALCCARTMGVF 203 Query: 650 VDGVLYWIGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDRSYRDLGLGVLRGSLCTFS 471 V G L+W+ R + S IV+FDLR E F EV+ P D + D+ + +LRG LC Sbjct: 204 VSGALHWVVTRDLEPESRDLIVAFDLRFEVFREVALPGTVDGKF-DMDVALLRGMLCIIE 262 Query: 470 FH-LERVDIWMIKNYGVKGTWTKHFSI-----ARSTKHLEPLFLLKSGE-ILLQMGLGSL 312 + D+W+++ YG +W K F++ + K L+PL ++G+ +L + L Sbjct: 263 NRGSDGFDVWVMREYGSHDSWCKMFTVGQPRDVKLMKSLKPLGYSRNGDKVLFEQDSKKL 322 Query: 311 LFYDPASDLTKAPSVSGIPDRFRTSTYVESLVPIASLMGMPGNSLATTISTGIKNKLHEE 132 +Y+ AS +SGIP+ + V SLV + +M S K KL EE Sbjct: 323 CWYNLASKDVSWVRISGIPNSIEGTVCVGSLVKPSLMMNRSVQSK--------KQKLVEE 374 Query: 131 K 129 K Sbjct: 375 K 375 >ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 389 Score = 138 bits (347), Expect = 2e-30 Identities = 98/273 (35%), Positives = 142/273 (52%), Gaps = 16/273 (5%) Frame = -2 Query: 980 GSCNGLICLSNFKTFISLWNPSIREFVQLSCDDPVIKNEL--------CGV-VMGFGYDG 828 GSCNGL+C+ N I+LWNPSIR + P + EL C V V GFGYD Sbjct: 93 GSCNGLLCICNIVDDIALWNPSIRAHRVV----PYLPVELKRYFGMCSCRVSVFGFGYDL 148 Query: 827 VCEKYKLVRIEYFYDLDGSDFMTDFNRVEVKVYTLGSNVWRLVDDTPCCYIGNINRVAHV 648 + YKLVRI F +D F + EVKV++L N WR + D P C + + Sbjct: 149 SNDDYKLVRIAQFGGVDRKSFES-----EVKVFSLRKNSWRRIADMPYCVLYPGENGIYA 203 Query: 647 DGVLYWIGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDRSYRDLGLGVLRGSLCTFSF 468 +G L+W+ + +IV+ DL E + V P F D + ++G+GVL+G L ++ Sbjct: 204 NGALHWLVSQDPDSTVADTIVALDLGVEDYHVVPKPEFVDMNC-NMGVGVLQGCLSLLAY 262 Query: 467 -HLERVDIWMIKNYGVKGTWTKHFSIAR-----STKHLEPLFLLKSG-EILLQMGLGSLL 309 ERVD+W+++ Y VK +W+K FS+AR + L+PL KSG E+L++ +L Sbjct: 263 ARSERVDVWVMEEYMVKESWSKLFSVARLEVIGILRSLKPLAYSKSGNEVLIEHDNVNLF 322 Query: 308 FYDPASDLTKAPSVSGIPDRFRTSTYVESLVPI 210 +YD + G+P F V SLVP+ Sbjct: 323 WYDLKRKEVVNVWIQGVPITFEAEICVGSLVPL 355 >ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max] gi|255637050|gb|ACU18857.1| unknown [Glycine max] Length = 406 Score = 135 bits (340), Expect = 2e-29 Identities = 89/264 (33%), Positives = 129/264 (48%), Gaps = 9/264 (3%) Frame = -2 Query: 980 GSCNGLICLSNFKTFISLWNPSIREFVQLSCDDPVIKNEL---CGVVMGFGYDGVCEKYK 810 GSCNGL+C + + LWNPSIR +S P + N C G GYD V E YK Sbjct: 150 GSCNGLLCFAIKGDCVLLWNPSIR----VSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYK 205 Query: 809 LVRIEYFYDLDGSDFMTDFNRVEVKVYTLGSNVWRLVDDTPCCYIGNINRVAHVDGVLYW 630 +V + D S++ F +VKVY++ +N WR + D P ++ N V G L W Sbjct: 206 VVAVF----CDPSEY---FIECKVKVYSMATNSWRKIQDFPHGFLPFQNSGKFVSGTLNW 258 Query: 629 IGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDRSYRDLGLGVLRGSLC-TFSFHLERV 453 +G S+ IVS DL E + EV P +E LGVL+G LC + + Sbjct: 259 AANHSIGPSSFWVIVSLDLHKETYREVLPPDYEKEDCSTPSLGVLQGCLCMNYDYKKTHF 318 Query: 452 DIWMIKNYGVKGTWTKHFSI-----ARSTKHLEPLFLLKSGEILLQMGLGSLLFYDPASD 288 +WM+K+YGV+ +W K SI + P ++ ++G++LL L+ YDP ++ Sbjct: 319 VVWMMKDYGVRESWVKLVSIPYVPNPEDFSYSGPYYISENGKVLLMFEF-DLILYDPRNN 377 Query: 287 LTKAPSVSGIPDRFRTSTYVESLV 216 K P + F YVE+LV Sbjct: 378 SFKYPKIESGKGWFDAEVYVETLV 401 >ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max] Length = 405 Score = 133 bits (334), Expect = 7e-29 Identities = 89/264 (33%), Positives = 127/264 (48%), Gaps = 9/264 (3%) Frame = -2 Query: 980 GSCNGLICLSNFKTFISLWNPSIREFVQLSCDDPVIKNEL---CGVVMGFGYDGVCEKYK 810 GSCNGL+C + + LWNPSIR +S P + N C G GYD V E YK Sbjct: 149 GSCNGLLCFAIKGDCVLLWNPSIR----VSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYK 204 Query: 809 LVRIEYFYDLDGSDFMTDFNRVEVKVYTLGSNVWRLVDDTPCCYIGNINRVAHVDGVLYW 630 +V + D S++ F +VKVY++ +N WR + D P + N V G L W Sbjct: 205 VVAVF----CDPSEY---FIECKVKVYSMATNSWRKIQDFPHGFSPFQNSGKFVSGTLNW 257 Query: 629 IGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDRSYRDLGLGVLRGSLC-TFSFHLERV 453 +G S IVS DL E + EV P +E GLGVL+G LC + + Sbjct: 258 AANHSIGSSSLWVIVSLDLHKETYREVLPPDYEKEDCSTPGLGVLQGCLCMNYDYKKTHF 317 Query: 452 DIWMIKNYGVKGTWTKHFSI-----ARSTKHLEPLFLLKSGEILLQMGLGSLLFYDPASD 288 +WM+K+YG + +W K SI + + P ++ ++GE+LL L+ Y+P + Sbjct: 318 VVWMMKDYGARESWVKLVSIPYVPNPENFSYSGPYYISENGEVLLMFEF-DLILYNPRDN 376 Query: 287 LTKAPSVSGIPDRFRTSTYVESLV 216 K P + F YVE+LV Sbjct: 377 SFKYPKIESGKGWFDAEVYVETLV 400