BLASTX nr result

ID: Coptis25_contig00026297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026297
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322094.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
emb|CBI15559.3| unnamed protein product [Vitis vinifera]               58   9e-07
ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vi...    58   9e-07
ref|XP_002532492.1| Golgin-84, putative [Ricinus communis] gi|22...    57   1e-06
ref|XP_003524345.1| PREDICTED: golgin candidate 2-like [Glycine ...    55   5e-06

>ref|XP_002322094.1| predicted protein [Populus trichocarpa] gi|222869090|gb|EEF06221.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +2

Query: 77  MSNWISSKLKVAETFLQQIDQTAAESLKKGENTRSDE 187
           M+NWISSKLKVAETF +QIDQ AAESLKK E  RSD+
Sbjct: 1   MANWISSKLKVAETFFEQIDQQAAESLKKNEQPRSDD 37


>emb|CBI15559.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = +2

Query: 77  MSNWISSKLKVAETFLQQIDQTAAESLKKGENTRSDELN 193
           M+ WISSKLKVAET LQQIDQ AAESL K E  +SDEL+
Sbjct: 1   MAGWISSKLKVAETLLQQIDQQAAESLGKNERPQSDELD 39


>ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vinifera]
          Length = 682

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = +2

Query: 77  MSNWISSKLKVAETFLQQIDQTAAESLKKGENTRSDELN 193
           M+ WISSKLKVAET LQQIDQ AAESL K E  +SDEL+
Sbjct: 1   MAGWISSKLKVAETLLQQIDQQAAESLGKNERPQSDELD 39


>ref|XP_002532492.1| Golgin-84, putative [Ricinus communis] gi|223527791|gb|EEF29891.1|
           Golgin-84, putative [Ricinus communis]
          Length = 691

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = +2

Query: 77  MSNWISSKLKVAETFLQQIDQTAAESLKKGENTRSDE 187
           MSNWISSKLKVAETF +QIDQ AAESLKK E +   E
Sbjct: 1   MSNWISSKLKVAETFFEQIDQQAAESLKKNERSLGSE 37


>ref|XP_003524345.1| PREDICTED: golgin candidate 2-like [Glycine max]
          Length = 689

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +2

Query: 77  MSNWISSKLKVAETFLQQIDQTAAESLKKGENTRSDE 187
           MSNWISSKLK AE+ L QIDQ AAESL+K E  RS+E
Sbjct: 1   MSNWISSKLKAAESILHQIDQQAAESLRKNEGFRSEE 37


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