BLASTX nr result
ID: Coptis25_contig00026290
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00026290 (660 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267941.1| PREDICTED: microtubule-associated protein SP... 192 4e-47 ref|XP_004146798.1| PREDICTED: microtubule-associated protein TO... 192 6e-47 emb|CBI32067.3| unnamed protein product [Vitis vinifera] 189 4e-46 ref|XP_002520195.1| Microtubule-associated protein TORTIFOLIA1, ... 182 5e-44 ref|XP_003517749.1| PREDICTED: microtubule-associated protein SP... 180 2e-43 >ref|XP_002267941.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Vitis vinifera] Length = 654 Score = 192 bits (489), Expect = 4e-47 Identities = 98/175 (56%), Positives = 129/175 (73%) Frame = +3 Query: 135 PTSSQTKKMTQPKRSSPTHELKKRVITCLNKLSDRDTHTQATTELETIIKSLTHHDSFAS 314 P S + + K++ T +LK RVITCLNKLSDRDT T ELE+I ++LTH DSF+ Sbjct: 2 PQMSLSSSPSLSKKTVSTRDLKHRVITCLNKLSDRDTLAVGTAELESIARNLTH-DSFSP 60 Query: 315 FLTCIYETDSSSKTQVRKQCVRLLGFISIIHGNALTPFVPKMISNIIKRLHDSDSVVRTA 494 FL+C+Y TDSS K+ VRKQCVRLLG +S HG++L+P + KM+SN+++RL DSDS VR A Sbjct: 61 FLSCLYGTDSSEKSPVRKQCVRLLGVLSETHGDSLSPHLSKMLSNVVRRLRDSDSAVRLA 120 Query: 495 CVDSVTIMCSSISKVSFFTLFLKPFMETMLFEQDYNSQMGSTLCLTSAIEACNDP 659 CVD+V +M S I+K F+ FLKP +++L EQDYN Q+GS LC+ +AIEA DP Sbjct: 121 CVDAVGVMSSQITKPP-FSAFLKPLTDSILLEQDYNLQIGSALCIAAAIEAAPDP 174 >ref|XP_004146798.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cucumis sativus] gi|449518027|ref|XP_004166045.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cucumis sativus] Length = 658 Score = 192 bits (487), Expect = 6e-47 Identities = 99/178 (55%), Positives = 135/178 (75%), Gaps = 3/178 (1%) Frame = +3 Query: 135 PTSSQTKK--MTQPKRS-SPTHELKKRVITCLNKLSDRDTHTQATTELETIIKSLTHHDS 305 P SS +K+ ++ P+ + + H+LK+RVI CLNKL DRDT A ELE+I K+LT+ DS Sbjct: 2 PMSSFSKRSSLSPPQPAVAANHDLKQRVIACLNKLEDRDTLAMAANELESIAKALTY-DS 60 Query: 306 FASFLTCIYETDSSSKTQVRKQCVRLLGFISIIHGNALTPFVPKMISNIIKRLHDSDSVV 485 F+SFL+CI+ TD+SSK+ VRKQCV L+G +S HG+AL+PF+ KMIS +++RL DSDS + Sbjct: 61 FSSFLSCIHNTDASSKSPVRKQCVYLIGLLSQSHGDALSPFLSKMISTVVRRLRDSDSTI 120 Query: 486 RTACVDSVTIMCSSISKVSFFTLFLKPFMETMLFEQDYNSQMGSTLCLTSAIEACNDP 659 R+ACVD+ +M S I+K F++FLKP MET+ EQD NSQ+GS LCL +A+EA DP Sbjct: 121 RSACVDATALMSSQITKPP-FSVFLKPLMETLTLEQDLNSQIGSALCLAAAVEAAPDP 177 >emb|CBI32067.3| unnamed protein product [Vitis vinifera] Length = 653 Score = 189 bits (480), Expect = 4e-46 Identities = 95/158 (60%), Positives = 122/158 (77%) Frame = +3 Query: 186 THELKKRVITCLNKLSDRDTHTQATTELETIIKSLTHHDSFASFLTCIYETDSSSKTQVR 365 T +LK RVITCLNKLSDRDT T ELE+I ++LTH DSF+ FL+C+Y TDSS K+ VR Sbjct: 18 TRDLKHRVITCLNKLSDRDTLAVGTAELESIARNLTH-DSFSPFLSCLYGTDSSEKSPVR 76 Query: 366 KQCVRLLGFISIIHGNALTPFVPKMISNIIKRLHDSDSVVRTACVDSVTIMCSSISKVSF 545 KQCVRLLG +S HG++L+P + KM+SN+++RL DSDS VR ACVD+V +M S I+K Sbjct: 77 KQCVRLLGVLSETHGDSLSPHLSKMLSNVVRRLRDSDSAVRLACVDAVGVMSSQITKPP- 135 Query: 546 FTLFLKPFMETMLFEQDYNSQMGSTLCLTSAIEACNDP 659 F+ FLKP +++L EQDYN Q+GS LC+ +AIEA DP Sbjct: 136 FSAFLKPLTDSILLEQDYNLQIGSALCIAAAIEAAPDP 173 >ref|XP_002520195.1| Microtubule-associated protein TORTIFOLIA1, putative [Ricinus communis] gi|223540687|gb|EEF42250.1| Microtubule-associated protein TORTIFOLIA1, putative [Ricinus communis] Length = 654 Score = 182 bits (462), Expect = 5e-44 Identities = 98/176 (55%), Positives = 120/176 (68%), Gaps = 9/176 (5%) Frame = +3 Query: 159 MTQPKRSSPT---------HELKKRVITCLNKLSDRDTHTQATTELETIIKSLTHHDSFA 311 M+ KRS P+ ++LK RVI+CLNKLSDRDT ATTELETI K+L HD+F+ Sbjct: 1 MSLQKRSPPSLTLSTTTTNNDLKNRVISCLNKLSDRDTLLLATTELETIAKTLATHDAFS 60 Query: 312 SFLTCIYETDSSSKTQVRKQCVRLLGFISIIHGNALTPFVPKMISNIIKRLHDSDSVVRT 491 SFLTCIY TDSS ++ VRK CV LL +S HGN+L P KMIS + +RLHD DS VR Sbjct: 61 SFLTCIYNTDSSCRSPVRKHCVNLLTLLSNSHGNSLAPHFSKMISTLTRRLHDPDSAVRA 120 Query: 492 ACVDSVTIMCSSISKVSFFTLFLKPFMETMLFEQDYNSQMGSTLCLTSAIEACNDP 659 ACV++ T M S I+K F TL KP +E M E+D+N Q+GS LCL +AIEA P Sbjct: 121 ACVEATTAMSSQITKPPFSTL-SKPLIEIMTVEKDFNCQIGSALCLAAAIEAAPQP 175 >ref|XP_003517749.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Glycine max] Length = 793 Score = 180 bits (457), Expect = 2e-43 Identities = 87/158 (55%), Positives = 119/158 (75%) Frame = +3 Query: 186 THELKKRVITCLNKLSDRDTHTQATTELETIIKSLTHHDSFASFLTCIYETDSSSKTQVR 365 TH L++RVITCLNKLSDRDT A ELE+I ++L +HDSF+SFL+CI+ TDSSSK+ VR Sbjct: 20 THNLRQRVITCLNKLSDRDTLAGAAAELESIARTL-NHDSFSSFLSCIHNTDSSSKSPVR 78 Query: 366 KQCVRLLGFISIIHGNALTPFVPKMISNIIKRLHDSDSVVRTACVDSVTIMCSSISKVSF 545 KQCV LL +S HG AL+PF+ KM++ +++RL D+DS VR+ CVD+V M S I++ F Sbjct: 79 KQCVHLLNVLSRFHGEALSPFISKMLATVLRRLRDTDSAVRSECVDAVASMSSRITRPPF 138 Query: 546 FTLFLKPFMETMLFEQDYNSQMGSTLCLTSAIEACNDP 659 FL+P M+ + EQ+ N+Q+G+ LCL +A+EA DP Sbjct: 139 SAAFLRPLMDALAQEQEANAQIGAALCLAAAVEASPDP 176