BLASTX nr result

ID: Coptis25_contig00026286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026286
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323216.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_004172726.1| PREDICTED: uncharacterized LOC101211236, par...   123   2e-26
ref|XP_004136766.1| PREDICTED: uncharacterized protein LOC101211...   123   2e-26
ref|XP_003554092.1| PREDICTED: uncharacterized protein LOC100789...   122   3e-26
gb|ACU19122.1| unknown [Glycine max]                                  122   3e-26

>ref|XP_002323216.1| predicted protein [Populus trichocarpa] gi|222867846|gb|EEF04977.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/112 (52%), Positives = 77/112 (68%)
 Frame = +3

Query: 6   KRSLCCKFSQXXXXXXXXXXXXXXXXXXXXVQRLKKLLTISTNGTLHIHALRLVKRELGL 185
           +R+LCC+ S                      +R+K+LL +S NG LH+HALRL++RELGL
Sbjct: 128 RRNLCCRISGKFKGLVSEEEGLVKDCELECAKRVKRLLMMSKNGRLHVHALRLIRRELGL 187

Query: 186 PEDFLDSILLKYPDDFKLVDLEIVALVSRDESLAIAKVEKWREDEYTEKWLS 341
           PEDF +S+L KY +DF+LVDLEIV LV +DE+  +A+VEKWRE EY EKWLS
Sbjct: 188 PEDFRESVLGKYKEDFRLVDLEIVELVDKDENFGVAEVEKWREKEYREKWLS 239


>ref|XP_004172726.1| PREDICTED: uncharacterized LOC101211236, partial [Cucumis sativus]
          Length = 387

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/112 (55%), Positives = 77/112 (68%)
 Frame = +3

Query: 6   KRSLCCKFSQXXXXXXXXXXXXXXXXXXXXVQRLKKLLTISTNGTLHIHALRLVKRELGL 185
           +R+LCC+ +                     VQRLKKLL +S NGTLH+HALRL+ RELGL
Sbjct: 88  RRNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGL 147

Query: 186 PEDFLDSILLKYPDDFKLVDLEIVALVSRDESLAIAKVEKWREDEYTEKWLS 341
           P+ F +SIL KY DDF+LVDLEIV LV + ++ AIA+VEKWRE E+ EKWLS
Sbjct: 148 PDGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLS 199


>ref|XP_004136766.1| PREDICTED: uncharacterized protein LOC101211236 [Cucumis sativus]
          Length = 419

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/112 (55%), Positives = 77/112 (68%)
 Frame = +3

Query: 6   KRSLCCKFSQXXXXXXXXXXXXXXXXXXXXVQRLKKLLTISTNGTLHIHALRLVKRELGL 185
           +R+LCC+ +                     VQRLKKLL +S NGTLH+HALRL+ RELGL
Sbjct: 120 RRNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGL 179

Query: 186 PEDFLDSILLKYPDDFKLVDLEIVALVSRDESLAIAKVEKWREDEYTEKWLS 341
           P+ F +SIL KY DDF+LVDLEIV LV + ++ AIA+VEKWRE E+ EKWLS
Sbjct: 180 PDGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLS 231


>ref|XP_003554092.1| PREDICTED: uncharacterized protein LOC100789334 [Glycine max]
          Length = 419

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/112 (54%), Positives = 77/112 (68%)
 Frame = +3

Query: 6   KRSLCCKFSQXXXXXXXXXXXXXXXXXXXXVQRLKKLLTISTNGTLHIHALRLVKRELGL 185
           +++ CC+ ++                    V+R+KKLL +S NGTL +HALRL KRELGL
Sbjct: 113 RKNTCCRITKRMKELILLEGLVVKQQETEAVKRVKKLLMMSLNGTLRLHALRLFKRELGL 172

Query: 186 PEDFLDSILLKYPDDFKLVDLEIVALVSRDESLAIAKVEKWREDEYTEKWLS 341
           PEDF DSIL KY  DF+LVDLE+VALV  D  LA+A+VE+WRE EY+EKWLS
Sbjct: 173 PEDFRDSILGKYSADFRLVDLEVVALVDWDAELAVARVEEWREKEYSEKWLS 224


>gb|ACU19122.1| unknown [Glycine max]
          Length = 419

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/112 (54%), Positives = 77/112 (68%)
 Frame = +3

Query: 6   KRSLCCKFSQXXXXXXXXXXXXXXXXXXXXVQRLKKLLTISTNGTLHIHALRLVKRELGL 185
           +++ CC+ ++                    V+R+KKLL +S NGTL +HALRL KRELGL
Sbjct: 113 RKNTCCRITKRMKELILLEGLVVKQQETEAVKRVKKLLMMSLNGTLRLHALRLFKRELGL 172

Query: 186 PEDFLDSILLKYPDDFKLVDLEIVALVSRDESLAIAKVEKWREDEYTEKWLS 341
           PEDF DSIL KY  DF+LVDLE+VALV  D  LA+A+VE+WRE EY+EKWLS
Sbjct: 173 PEDFRDSILGKYSADFRLVDLEVVALVDWDAELAVARVEEWREKEYSEKWLS 224


Top