BLASTX nr result

ID: Coptis25_contig00026281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026281
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15487.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002277015.2| PREDICTED: uncharacterized protein LOC100261...    91   1e-16
emb|CBI15488.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002516765.1| wall-associated kinase, putative [Ricinus co...    91   1e-16
ref|XP_002332860.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16

>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/118 (36%), Positives = 66/118 (55%)
 Frame = -2

Query: 354 SYFSPYPFVSFLFIIIFFHDFPFSFGEDDYRFLNCSRGVFECGDVKSIGYPFWGNGRAQY 175
           S+    P  +F FI I     P  F  D+ ++  C+  ++ECGD+K IGYPFWG+GR ++
Sbjct: 8   SFILHSPITTFFFIFIAI---PMCFCVDNQQYEECTSSLYECGDMKGIGYPFWGDGRPKF 64

Query: 174 CGHPDFALKCEEDDVIQIVIQGQNYRVLNIFENNHTLRMRTMNPINNNCPERLANISL 1
           CG   F LKC+ DD   I I    +RVLNI  + + +R+   +  +  CP+   + +L
Sbjct: 65  CGQQGFELKCQNDDYPLIDIGSLEFRVLNISNSTYAMRIARKDFWDQTCPKEFQSTTL 122


>ref|XP_002277015.2| PREDICTED: uncharacterized protein LOC100261246 [Vitis vinifera]
          Length = 1963

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/104 (40%), Positives = 64/104 (61%)
 Frame = -2

Query: 312  IIFFHDFPFSFGEDDYRFLNCSRGVFECGDVKSIGYPFWGNGRAQYCGHPDFALKCEEDD 133
            I FF  F  SF +D+ ++  C+  ++ECGD+K IGYPFWG+GR Q+CG   F LKC++DD
Sbjct: 1320 ITFFSIFITSFCDDNQQYEECTSRLYECGDMKGIGYPFWGDGRPQFCGQ-GFELKCQDDD 1378

Query: 132  VIQIVIQGQNYRVLNIFENNHTLRMRTMNPINNNCPERLANISL 1
               I I    +RVLNI  + + +R+   +  +  CP+   + +L
Sbjct: 1379 YPLIAIGSLEFRVLNISNSTYAMRIARKDFWDQTCPKEFQSTTL 1422



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
 Frame = -2

Query: 345 SPYPFVSFLFIIIFFHDFPFSFGEDDYRFLNCSRGVFECGDVKSIGYPFWGNGRAQYCGH 166
           SP   V  +F++     FP S   +D+ + NC + +FECG ++ IGYPFWGNGR  +CG 
Sbjct: 272 SPKSIVVVIFLLSL--SFPESACAEDFSYSNC-KSLFECGRLRDIGYPFWGNGRPYHCGR 328

Query: 165 PDFALKCEEDDVIQIVIQGQNYRVLNIFENNHTLRM-RTMNPINNN--CPERLANI 7
           P F L+CE  +   I I+ Q Y VL+I      L++ R ++  + N  CPE  A +
Sbjct: 329 PKFELRCERGEP-TIEIKSQKYHVLDIHHETQILKIARFLDLFDGNIVCPESNATM 383



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
 Frame = -2

Query: 357  CSYFSPYPFVSFLFIIIFFHDFPFSFGEDDYRFLNCSRGVFECGDVKSIGYPFWGNG-RA 181
            CS F P   V  LFI I  H FP      D+R+  C+  V ECG +  I YPFW NG + 
Sbjct: 1035 CSNFFPSSLVISLFISILSHAFPKYVCGIDFRYATCNSSV-ECGRLGKIHYPFWVNGSQP 1093

Query: 180  QYCGHPDFALKCEEDDVIQIVIQGQNYRVLNIFENNHTLRM-RTMNPINNN--CP 25
             YCGHP F L C +D+   ++I  + + V+++     TL++ R   P   N  CP
Sbjct: 1094 WYCGHPWFGLFCHKDEA-TMLIWPELFHVIDMDNRTQTLKIARIYEPSTGNFFCP 1147



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
 Frame = -2

Query: 339 YPFVSFLFIIIFF--HDFPFSFGEDDYRFLNCSRGVFECGD-VKSIGYPFWGNG-RAQYC 172
           +P   F+ I+IF   H FP S   +D  ++ C+  V +C D V  I YPFW +G +  YC
Sbjct: 6   FPSTHFISILIFLLSHHFPISIRCEDSPYVKCNFPV-QCDDEVGKIVYPFWVDGYQPDYC 64

Query: 171 GHPDFALKCEEDDVIQIVIQGQNYRVLNIFENNHTLRMRTMNPINN------NCPERLAN 10
           GHP F L C    V   ++ G+ Y V+NI   N+  ++ T+  +N        CPE+ A 
Sbjct: 65  GHPAFKLDCMGFKVTIEMMHGK-YDVINI---NYEAQILTIARVNEFFIKDILCPEQNAT 120

Query: 9   I 7
           +
Sbjct: 121 M 121


>emb|CBI15488.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/104 (40%), Positives = 64/104 (61%)
 Frame = -2

Query: 312 IIFFHDFPFSFGEDDYRFLNCSRGVFECGDVKSIGYPFWGNGRAQYCGHPDFALKCEEDD 133
           I FF  F  SF +D+ ++  C+  ++ECGD+K IGYPFWG+GR Q+CG   F LKC++DD
Sbjct: 24  ITFFSIFITSFCDDNQQYEECTSRLYECGDMKGIGYPFWGDGRPQFCGQ-GFELKCQDDD 82

Query: 132 VIQIVIQGQNYRVLNIFENNHTLRMRTMNPINNNCPERLANISL 1
              I I    +RVLNI  + + +R+   +  +  CP+   + +L
Sbjct: 83  YPLIAIGSLEFRVLNISNSTYAMRIARKDFWDQTCPKEFQSTTL 126


>ref|XP_002516765.1| wall-associated kinase, putative [Ricinus communis]
           gi|223544138|gb|EEF45663.1| wall-associated kinase,
           putative [Ricinus communis]
          Length = 685

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
 Frame = -2

Query: 339 YPFVS-FLFI-IIFFHDFPFSFGEDDYRFLNCSRGVFECGDVKSIGYPFWGNGRAQYCGH 166
           +P +S FLFI II F    F+  + D ++LNCS+  FECG++  IGYPFWG+ R QYCGH
Sbjct: 8   FPTMSLFLFITIILFRPPTFACAQIDSQYLNCSQK-FECGNITDIGYPFWGSNRPQYCGH 66

Query: 165 PDFALKCEEDDVIQIVIQGQNYRVLNIFENNHTLRMRTMNPINNNCPERLANISL 1
           P+F L C     + I I+   Y+VL I     TL++   + I+N CP    + +L
Sbjct: 67  PEFELNCTGQTAV-ITIEELTYQVLEINSEEKTLKVARTDYIDNICPSNPVSTTL 120


>ref|XP_002332860.1| predicted protein [Populus trichocarpa] gi|222833662|gb|EEE72139.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/108 (39%), Positives = 61/108 (56%)
 Frame = -2

Query: 333 FVSFLFIIIFFHDFPFSFGEDDYRFLNCSRGVFECGDVKSIGYPFWGNGRAQYCGHPDFA 154
           F++F+  +IF       F  DD R++NCS   F+CGDVK +GYPFWG+ R  YCG+P+  
Sbjct: 220 FITFI-TMIFICGSALVFANDDERYVNCSNS-FDCGDVKGVGYPFWGSNRPDYCGYPELK 277

Query: 153 LKCEEDDVIQIVIQGQNYRVLNIFENNHTLRMRTMNPINNNCPERLAN 10
           L C + D  +I I+   Y+VL I     TL +   +   N CP  + N
Sbjct: 278 LDCSDQDP-EITIEKLTYKVLGIDNQTRTLSVARKDYAENICPTLILN 324


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