BLASTX nr result

ID: Coptis25_contig00026276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026276
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vit...   134   1e-29
emb|CAN70067.1| hypothetical protein VITISV_015040 [Vitis vinifera]   132   2e-29
ref|XP_002271208.2| PREDICTED: transcription factor bHLH120-like...   118   4e-25
emb|CBI24474.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25

>ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vitis vinifera]
           gi|296084088|emb|CBI24476.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score =  134 bits (336), Expect = 1e-29
 Identities = 67/107 (62%), Positives = 84/107 (78%)
 Frame = -1

Query: 336 KHLEKKIVHRDFERQRRQEMSQLYSSLRSLLPIEYVKGKRSISDHMNEATNYIKHLEKKI 157
           K  +KKIVHRD ERQRRQ+M+ LY+SLRSLLP+EY+KGKR+IS+HMN A NYIKHL+KKI
Sbjct: 66  KKKKKKIVHRDVERQRRQDMATLYTSLRSLLPLEYIKGKRAISEHMNGAVNYIKHLQKKI 125

Query: 156 QELRGKRDKLKRLSNFSATNTPGESLFGTDFATVTQCWKGVEVVVGS 16
           +EL  KR++LK L+N S+ N+ G      +F TV  CW GVE+VV S
Sbjct: 126 KELGEKRNELKSLANSSSRNSSG------NFVTVCPCWGGVEIVVSS 166


>emb|CAN70067.1| hypothetical protein VITISV_015040 [Vitis vinifera]
          Length = 208

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/107 (61%), Positives = 84/107 (78%)
 Frame = -1

Query: 336 KHLEKKIVHRDFERQRRQEMSQLYSSLRSLLPIEYVKGKRSISDHMNEATNYIKHLEKKI 157
           K  +KKIVHRD ERQRRQ+M+ LY+SLRSLLP+EY+KGKR+IS+HMN A NYIKHL+KKI
Sbjct: 39  KKKKKKIVHRDVERQRRQDMATLYTSLRSLLPLEYIKGKRAISEHMNGAVNYIKHLQKKI 98

Query: 156 QELRGKRDKLKRLSNFSATNTPGESLFGTDFATVTQCWKGVEVVVGS 16
           +EL  KR++LK L+N S+ N+ G      +F TV  CW GVE+V+ S
Sbjct: 99  KELGEKRNELKSLANSSSRNSSG------NFVTVCPCWGGVEIVLSS 139


>ref|XP_002271208.2| PREDICTED: transcription factor bHLH120-like [Vitis vinifera]
          Length = 195

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/110 (55%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
 Frame = -1

Query: 324 KKIVHRDFERQRRQEMSQLYSSLRSLLPIEYVKGKRSISDHMNEATNYIKHLEKKIQELR 145
           KKI+ RD ERQRRQEM+ L +SLRSLLP+EYVKGKRSISDHM+EA NYI HL+ KIQ+L 
Sbjct: 25  KKILRRDMERQRRQEMANLNASLRSLLPLEYVKGKRSISDHMHEAVNYINHLQMKIQDLG 84

Query: 144 GKRDKLKRLSNFSATNTPGESLF--GTDFATVTQCWKGVEVVVGSSLKNG 1
            KRD+L+  SN SA ++   S +        V+ C  GVE+++    K G
Sbjct: 85  TKRDELRNQSNMSACDSESGSSYKRSRHCVIVSPCMDGVEILISGGFKEG 134


>emb|CBI24474.3| unnamed protein product [Vitis vinifera]
          Length = 231

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/110 (55%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
 Frame = -1

Query: 324 KKIVHRDFERQRRQEMSQLYSSLRSLLPIEYVKGKRSISDHMNEATNYIKHLEKKIQELR 145
           KKI+ RD ERQRRQEM+ L +SLRSLLP+EYVKGKRSISDHM+EA NYI HL+ KIQ+L 
Sbjct: 60  KKILRRDMERQRRQEMANLNASLRSLLPLEYVKGKRSISDHMHEAVNYINHLQMKIQDLG 119

Query: 144 GKRDKLKRLSNFSATNTPGESLF--GTDFATVTQCWKGVEVVVGSSLKNG 1
            KRD+L+  SN SA ++   S +        V+ C  GVE+++    K G
Sbjct: 120 TKRDELRNQSNMSACDSESGSSYKRSRHCVIVSPCMDGVEILISGGFKEG 169


>ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|222868860|gb|EEF05991.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/108 (56%), Positives = 83/108 (76%), Gaps = 2/108 (1%)
 Frame = -1

Query: 327 EKKIVHRDFERQRRQEMSQLYSSLRSLLPIEYVKGKRSISDHMNEATNYIKHLEKKIQEL 148
           +KK++HRD ERQRRQEM+ LY+SLR+LLP+E++KGKRSISDHMNEA NYIK+L+KKI+E 
Sbjct: 71  KKKMMHRDIERQRRQEMTTLYASLRALLPLEFIKGKRSISDHMNEAVNYIKYLQKKIKET 130

Query: 147 RGKRDKLKRLSNFSATNTP-GESLFGTDFATVTQCWK-GVEVVVGSSL 10
             KRD+LK+LS+FS+  +P G S   +  +   Q +  G+E+   S L
Sbjct: 131 SAKRDELKKLSDFSSVASPSGCSNKSSSSSVALQPYPGGIEITFDSDL 178


Top